BLASTX nr result

ID: Panax21_contig00018795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018795
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310464.1| predicted protein [Populus trichocarpa] gi|2...   282   1e-73
ref|XP_002515728.1| Nuc-1 negative regulatory protein preg, puta...   281   1e-73
ref|XP_002280596.1| PREDICTED: cyclin-U1-1 [Vitis vinifera]           273   4e-71
ref|NP_001235448.1| uncharacterized protein LOC100527137 [Glycin...   256   5e-66
ref|XP_003540320.1| PREDICTED: cyclin-U1-1-like [Glycine max]         254   3e-65

>ref|XP_002310464.1| predicted protein [Populus trichocarpa] gi|222853367|gb|EEE90914.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  282 bits (721), Expect = 1e-73
 Identities = 147/219 (67%), Positives = 173/219 (78%), Gaps = 6/219 (2%)
 Frame = -3

Query: 927 RRLDPSDAEPTSTPRVLTILSFVLEKLVLRNDRLVYEL-----GCGSA-SRLGKILNVFH 766
           R+ +PS +E T TPRVLTILS V+EKLV RND+LV ++     G  S  +R+GK LNVFH
Sbjct: 13  RQSEPSPSEST-TPRVLTILSHVIEKLVARNDKLVDDMDKKLDGVSSGLARVGKSLNVFH 71

Query: 765 GVRAPSISIPKYLERIYKYTSCSPSCFVVGYVYIDRLLHKYPDSLVVSLNVHRLLVTSVM 586
           GVRAP+ISI KYLER+YKYTSCSPSCFVVGYVYIDRL HK+PDSLV+SLNVHRLLVTSVM
Sbjct: 72  GVRAPNISIVKYLERLYKYTSCSPSCFVVGYVYIDRLTHKHPDSLVISLNVHRLLVTSVM 131

Query: 585 VASKMLDDVHYNNAFYARVGGVTNAXXXXXXXXXXXXXXXXMTVGSRVFESYCQQFEKEI 406
           VASKMLDDVHYNNAFYARVGGV+NA                + V SRVFESYC   EKE+
Sbjct: 132 VASKMLDDVHYNNAFYARVGGVSNAELNRLEMEFLFLLDFGVVVSSRVFESYCSHLEKEM 191

Query: 405 LLNGTAQKIERPVIRSVIDDVTEISVEDMQSSSPPQLVD 289
           ++NG +Q+IER ++ + +DDVTE+SVED QSSSPPQ +D
Sbjct: 192 MINGASQRIERAIVSNAVDDVTELSVEDTQSSSPPQGMD 230


>ref|XP_002515728.1| Nuc-1 negative regulatory protein preg, putative [Ricinus communis]
           gi|223545165|gb|EEF46675.1| Nuc-1 negative regulatory
           protein preg, putative [Ricinus communis]
          Length = 230

 Score =  281 bits (720), Expect = 1e-73
 Identities = 149/221 (67%), Positives = 170/221 (76%), Gaps = 6/221 (2%)
 Frame = -3

Query: 933 QPRRLDPSDAEPTSTPRVLTILSFVLEKLVLRNDRLVYELG------CGSASRLGKILNV 772
           Q R+ +PS +E T TPRVLTILS V+EKLV RNDRLV  L           + LGK LN 
Sbjct: 11  QSRQPEPSQSEQT-TPRVLTILSTVIEKLVTRNDRLVDGLSHRVDGMSSGLTHLGKSLNA 69

Query: 771 FHGVRAPSISIPKYLERIYKYTSCSPSCFVVGYVYIDRLLHKYPDSLVVSLNVHRLLVTS 592
           FHGVRAP+ISIPKYLER+YKYT+CSPSCFVVGYVYIDRLLHK+PDSLV+SLNVHRLLVTS
Sbjct: 70  FHGVRAPTISIPKYLERLYKYTNCSPSCFVVGYVYIDRLLHKHPDSLVISLNVHRLLVTS 129

Query: 591 VMVASKMLDDVHYNNAFYARVGGVTNAXXXXXXXXXXXXXXXXMTVGSRVFESYCQQFEK 412
           VMVASK+LDDVHYNNAFYA+VGGV+NA                + V SR+FESYC   EK
Sbjct: 130 VMVASKVLDDVHYNNAFYAKVGGVSNAELNRLEIELLFLLDFGVMVSSRIFESYCLHLEK 189

Query: 411 EILLNGTAQKIERPVIRSVIDDVTEISVEDMQSSSPPQLVD 289
           E+LL+G  QKIER +  + +DDVTEI VEDMQ+SSPPQLVD
Sbjct: 190 EMLLHGAIQKIERTIPSNSLDDVTEILVEDMQNSSPPQLVD 230


>ref|XP_002280596.1| PREDICTED: cyclin-U1-1 [Vitis vinifera]
          Length = 220

 Score =  273 bits (699), Expect = 4e-71
 Identities = 143/224 (63%), Positives = 170/224 (75%), Gaps = 2/224 (0%)
 Frame = -3

Query: 954 LAAADDIQPRRLDPS-DAEPTSTPRVLTILSFVLEKLVLRNDRLVYELGCGSASRLGKIL 778
           +  ADD+   R+ P      ++TPRVL +L+F +E+LV RN+ LV E    S   +GK L
Sbjct: 1   MLVADDVNDHRIRPEMTGVESTTPRVLAVLAFAMERLVARNEGLVGE----SIGLMGKSL 56

Query: 777 NVFHGVRAPSISIPKYLERIYKYTSCSPSCFVVGYVYIDRLLHKYPDSLVVSLNVHRLLV 598
           NVFHGVRAPSISIPKYLERIYKYT+CSPSCFVVGYVYIDRL+HK+PDSLV+SLNVHRLLV
Sbjct: 57  NVFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLVHKHPDSLVISLNVHRLLV 116

Query: 597 TSVMVASKMLDDVHYNNAFYARVGGVTNAXXXXXXXXXXXXXXXXMTVGSRVFESYCQQF 418
           TSVMVASKMLDDVHYNNAFYARVGGV+NA                + V SRVFESYC   
Sbjct: 117 TSVMVASKMLDDVHYNNAFYARVGGVSNAELNRLELELLFMLDFGVVVSSRVFESYCLYL 176

Query: 417 EKEILLNGTAQKIERPVIRSVIDDVTEISVEDMQ-SSSPPQLVD 289
           EKE+L NG  Q++ER ++ + +D+VTEISV+D Q SSSPPQ+VD
Sbjct: 177 EKEMLWNGAGQRMERAMVPNSVDEVTEISVDDTQTSSSPPQMVD 220


>ref|NP_001235448.1| uncharacterized protein LOC100527137 [Glycine max]
           gi|255631636|gb|ACU16185.1| unknown [Glycine max]
          Length = 232

 Score =  256 bits (655), Expect = 5e-66
 Identities = 139/208 (66%), Positives = 154/208 (74%), Gaps = 8/208 (3%)
 Frame = -3

Query: 888 PRVLTILSFVLEKLVLRNDRLVY-------ELGCGSASRLGKILNVFHGVRAPSISIPKY 730
           PRVL ILS +LEKLV RN++LV         L CGS  RLG  LN FHGVRAPSISIPKY
Sbjct: 26  PRVLCILSSMLEKLVARNEKLVDILSQQLDGLNCGSV-RLGNSLNTFHGVRAPSISIPKY 84

Query: 729 LERIYKYTSCSPSCFVVGYVYIDRLLHKYPDSLVVSLNVHRLLVTSVMVASKMLDDVHYN 550
           LERIYKYT+CSPSCFVVGYVYIDRL H++PDSLV SLNVHRLLVTSVMVASKMLDD HYN
Sbjct: 85  LERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTSLNVHRLLVTSVMVASKMLDDEHYN 144

Query: 549 NAFYARVGGVTNAXXXXXXXXXXXXXXXXMTVGSRVFESYCQQFEKEILLNGTAQKIERP 370
           NA YARVGGV+N                 + V SRVFESYC   EKE+++NGT  KIER 
Sbjct: 145 NAVYARVGGVSNTELNKLELELLFLLDFRVMVSSRVFESYCFHLEKEMVINGTGMKIERA 204

Query: 369 VIRSVIDDV-TEISVEDMQSSSPPQLVD 289
           +    +DD+ TEISVED QS SPPQ+VD
Sbjct: 205 LTPKAMDDLETEISVEDKQSPSPPQIVD 232


>ref|XP_003540320.1| PREDICTED: cyclin-U1-1-like [Glycine max]
          Length = 232

 Score =  254 bits (648), Expect = 3e-65
 Identities = 140/222 (63%), Positives = 163/222 (73%), Gaps = 7/222 (3%)
 Frame = -3

Query: 933 QPRRLDPSDAEPTSTPRVLTILSFVLEKLVLRNDRLVYEL-----GCGSAS-RLGKILNV 772
           +P + + S AE  + PRVL +LS +LEKLV RN++L+  L     G  S S RLG  LN 
Sbjct: 12  RPLQPETSLAE-LNLPRVLCVLSSMLEKLVARNEKLIDILSQELDGLNSGSVRLGNSLNT 70

Query: 771 FHGVRAPSISIPKYLERIYKYTSCSPSCFVVGYVYIDRLLHKYPDSLVVSLNVHRLLVTS 592
           FHGVRAPSISIPKYLERIYKYT+CSPSCFVVGYVYIDRL H++PDSLV SLNVHRLLVTS
Sbjct: 71  FHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTSLNVHRLLVTS 130

Query: 591 VMVASKMLDDVHYNNAFYARVGGVTNAXXXXXXXXXXXXXXXXMTVGSRVFESYCQQFEK 412
           VMVASKMLDD HYNNA YARVGGV+NA                + V SRVFESYC   EK
Sbjct: 131 VMVASKMLDDEHYNNAIYARVGGVSNAELNKLELELLFLLDFRVMVSSRVFESYCFHLEK 190

Query: 411 EILLNGTAQKIERPVIRSVIDDV-TEISVEDMQSSSPPQLVD 289
           E+++NGT  KIER +    +DD+ TEIS+ED QS SPPQ+V+
Sbjct: 191 EMVVNGTGMKIERALTPKAMDDLETEISIEDKQSPSPPQIVE 232


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