BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018781
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   402   e-110
emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]   402   e-110
emb|CBI24272.3| unnamed protein product [Vitis vinifera]              239   6e-61
ref|XP_002517667.1| pentatricopeptide repeat-containing protein,...   197   2e-48
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   192   6e-47

>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  402 bits (1034), Expect = e-110
 Identities = 195/276 (70%), Positives = 234/276 (84%)
 Frame = -2

Query: 830  FKALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNS 651
            F+AL +FRKM+  GVKPN +TIAS VS CTNLSL +HG+EIHGYCIK  ELDSDLLVGNS
Sbjct: 344  FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403

Query: 650  LVDLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETD 471
            LVD Y KC+ ++VAR+KF  IKQ DLVSWNAMLAGYA +G  ++AIELL EM+ QG+E D
Sbjct: 404  LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463

Query: 470  VITWNGLLTGFTKYGDGKTAQEFFYKMCMKGIHPNTTSLSGALAACAQVKDLKLGKEIHG 291
            +ITWNGL+TGFT+YGDGK A EFF +M   G+ PNTT++SGALAAC QV++LKLGKEIHG
Sbjct: 464  IITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHG 523

Query: 290  YVIRNEIELSTGVGSALISMYSACGSLEIACSVFNELSRKDVVIWNSIIAACAKSGFGVG 111
            YV+RN IELSTGVGSALISMYS C SLE+ACSVF+ELS +DVV+WNSII+ACA+SG  V 
Sbjct: 524  YVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVN 583

Query: 110  ALNLMRGLASSNLRPDTVTMVSALPACSRLASVRHG 3
            AL+L+R +  SN+  +TVTMVSALPACS+LA++R G
Sbjct: 584  ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG 619



 Score =  157 bits (397), Expect = 3e-36
 Identities = 82/291 (28%), Positives = 153/291 (52%), Gaps = 37/291 (12%)
 Frame = -2

Query: 815  IFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSLVDLY 636
            +F  M+  GV+P+      V   C+ L  Y+ GK+++ Y +     + +  V  S++D++
Sbjct: 177  LFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIG-FEGNSCVKGSILDMF 235

Query: 635  TKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDVITWN 456
             KC  +D+AR+ F  I+ KD+  WN M++GY +KG    A++ + +M+L GV+ D +TWN
Sbjct: 236  IKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWN 295

Query: 455  GLLTGFTKYGDGKTAQEFFY------------------------------------KMCM 384
             +++G+ + G  + A ++F                                     KM +
Sbjct: 296  AIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVL 355

Query: 383  KGIHPNTTSLSGALAACAQVKDLKLGKEIHGYVIR-NEIELSTGVGSALISMYSACGSLE 207
            +G+ PN+ +++ A++AC  +  L+ G+EIHGY I+  E++    VG++L+  Y+ C S+E
Sbjct: 356  EGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVE 415

Query: 206  IACSVFNELSRKDVVIWNSIIAACAKSGFGVGALNLMRGLASSNLRPDTVT 54
            +A   F  + + D+V WN+++A  A  G    A+ L+  +    + PD +T
Sbjct: 416  VARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIIT 466



 Score =  138 bits (348), Expect = 1e-30
 Identities = 75/274 (27%), Positives = 138/274 (50%)
 Frame = -2

Query: 824  ALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSLV 645
            AL  F++M + G+ PN  TI+  ++ C  +   + GKEIHGY ++   ++    VG++L+
Sbjct: 483  ALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRN-HIELSTGVGSALI 541

Query: 644  DLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDVI 465
             +Y+ C  L+VA   FS +  +D                                   V+
Sbjct: 542  SMYSGCDSLEVACSVFSELSTRD-----------------------------------VV 566

Query: 464  TWNGLLTGFTKYGDGKTAQEFFYKMCMKGIHPNTTSLSGALAACAQVKDLKLGKEIHGYV 285
             WN +++   + G    A +   +M +  +  NT ++  AL AC+++  L+ GKEIH ++
Sbjct: 567  VWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 626

Query: 284  IRNEIELSTGVGSALISMYSACGSLEIACSVFNELSRKDVVIWNSIIAACAKSGFGVGAL 105
            IR  ++    + ++LI MY  CGS++ +  +F+ + ++D+V WN +I+     GFG+ A+
Sbjct: 627  IRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAV 686

Query: 104  NLMRGLASSNLRPDTVTMVSALPACSRLASVRHG 3
            NL +   +  L+P+ +T  + L ACS    +  G
Sbjct: 687  NLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 720



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 45/168 (26%), Positives = 87/168 (51%)
 Frame = -2

Query: 557 MLAGYATKGCRDDAIELLHEMELQGVETDVITWNGLLTGFTKYGDGKTAQEFFYKMCMKG 378
           +L  Y   GC +DA  +  +M     E +V +W  ++  +   GD +   + FY M  +G
Sbjct: 130 LLEVYCQTGCVEDARRMFDKMS----ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185

Query: 377 IHPNTTSLSGALAACAQVKDLKLGKEIHGYVIRNEIELSTGVGSALISMYSACGSLEIAC 198
           + P+         AC+++K+ ++GK+++ Y++    E ++ V  +++ M+  CG ++IA 
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245

Query: 197 SVFNELSRKDVVIWNSIIAACAKSGFGVGALNLMRGLASSNLRPDTVT 54
             F E+  KDV +WN +++     G    AL  +  +  S ++PD VT
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT 293



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 48/145 (33%), Positives = 82/145 (56%)
 Frame = -2

Query: 824  ALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSLV 645
            AL + R+M  + V+ N VT+ S +  C+ L+  + GKEIH + I+   LD+   + NSL+
Sbjct: 584  ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG-LDTCNFILNSLI 642

Query: 644  DLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDVI 465
            D+Y +C  +  +R+ F  + Q+DLVSWN M++ Y   G   DA+ L  +    G++ + I
Sbjct: 643  DMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHI 702

Query: 464  TWNGLLTGFTKYGDGKTAQEFFYKM 390
            T+  LL+  +  G  +   ++F  M
Sbjct: 703  TFTNLLSACSHSGLIEEGWKYFKMM 727



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/114 (26%), Positives = 58/114 (50%)
 Frame = -2

Query: 344 LAACAQVKDLKLGKEIHGYVIRNEIELSTGVGSALISMYSACGSLEIACSVFNELSRKDV 165
           L  C ++ +L+LG ++H  ++ N +++   +GS L+ +Y   G +E A  +F+++S ++V
Sbjct: 96  LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNV 155

Query: 164 VIWNSIIAACAKSGFGVGALNLMRGLASSNLRPDTVTMVSALPACSRLASVRHG 3
             W +I+      G     + L   + +  +RPD         ACS L + R G
Sbjct: 156 FSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 209


>emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  402 bits (1034), Expect = e-110
 Identities = 195/276 (70%), Positives = 234/276 (84%)
 Frame = -2

Query: 830  FKALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNS 651
            F+AL +FRKM+  GVKPN +TIAS VS CTNLSL +HG+EIHGYCIK  ELDSDLLVGNS
Sbjct: 344  FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403

Query: 650  LVDLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETD 471
            LVD Y KC+ ++VAR+KF  IKQ DLVSWNAMLAGYA +G  ++AIELL EM+ QG+E D
Sbjct: 404  LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463

Query: 470  VITWNGLLTGFTKYGDGKTAQEFFYKMCMKGIHPNTTSLSGALAACAQVKDLKLGKEIHG 291
            +ITWNGL+TGFT+YGDGK A EFF +M   G+ PNTT++SGALAAC QV++LKLGKEIHG
Sbjct: 464  IITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHG 523

Query: 290  YVIRNEIELSTGVGSALISMYSACGSLEIACSVFNELSRKDVVIWNSIIAACAKSGFGVG 111
            YV+RN IELSTGVGSALISMYS C SLE+ACSVF+ELS +DVV+WNSII+ACA+SG  V 
Sbjct: 524  YVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVN 583

Query: 110  ALNLMRGLASSNLRPDTVTMVSALPACSRLASVRHG 3
            AL+L+R +  SN+  +TVTMVSALPACS+LA++R G
Sbjct: 584  ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG 619



 Score =  157 bits (397), Expect = 3e-36
 Identities = 82/291 (28%), Positives = 153/291 (52%), Gaps = 37/291 (12%)
 Frame = -2

Query: 815  IFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSLVDLY 636
            +F  M+  GV+P+      V   C+ L  Y+ GK+++ Y +     + +  V  S++D++
Sbjct: 177  LFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIG-FEGNSCVKGSILDMF 235

Query: 635  TKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDVITWN 456
             KC  +D+AR+ F  I+ KD+  WN M++GY +KG    A++ + +M+L GV+ D +TWN
Sbjct: 236  IKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWN 295

Query: 455  GLLTGFTKYGDGKTAQEFFY------------------------------------KMCM 384
             +++G+ + G  + A ++F                                     KM +
Sbjct: 296  AIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVL 355

Query: 383  KGIHPNTTSLSGALAACAQVKDLKLGKEIHGYVIR-NEIELSTGVGSALISMYSACGSLE 207
            +G+ PN+ +++ A++AC  +  L+ G+EIHGY I+  E++    VG++L+  Y+ C S+E
Sbjct: 356  EGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVE 415

Query: 206  IACSVFNELSRKDVVIWNSIIAACAKSGFGVGALNLMRGLASSNLRPDTVT 54
            +A   F  + + D+V WN+++A  A  G    A+ L+  +    + PD +T
Sbjct: 416  VARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIIT 466



 Score =  139 bits (349), Expect = 1e-30
 Identities = 75/274 (27%), Positives = 138/274 (50%)
 Frame = -2

Query: 824  ALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSLV 645
            AL  F++M + G+ PN  TI+  ++ C  +   + GKEIHGY ++   ++    VG++L+
Sbjct: 483  ALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRN-HIELSTGVGSALI 541

Query: 644  DLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDVI 465
             +Y+ C  L+VA   FS +  +D                                   V+
Sbjct: 542  SMYSGCDSLEVACSVFSELSTRD-----------------------------------VV 566

Query: 464  TWNGLLTGFTKYGDGKTAQEFFYKMCMKGIHPNTTSLSGALAACAQVKDLKLGKEIHGYV 285
             WN +++   + G    A +   +M +  +  NT ++  AL AC+++  L+ GKEIH ++
Sbjct: 567  VWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 626

Query: 284  IRNEIELSTGVGSALISMYSACGSLEIACSVFNELSRKDVVIWNSIIAACAKSGFGVGAL 105
            IR  ++    + ++LI MY  CGS++ +  +F+ + ++D+V WN +I+     GFG+ A+
Sbjct: 627  IRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAV 686

Query: 104  NLMRGLASSNLRPDTVTMVSALPACSRLASVRHG 3
            NL +   +  L+P+ +T  + L ACS    +  G
Sbjct: 687  NLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEG 720



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 45/168 (26%), Positives = 87/168 (51%)
 Frame = -2

Query: 557 MLAGYATKGCRDDAIELLHEMELQGVETDVITWNGLLTGFTKYGDGKTAQEFFYKMCMKG 378
           +L  Y   GC +DA  +  +M     E +V +W  ++  +   GD +   + FY M  +G
Sbjct: 130 LLEVYCQTGCVEDARRMFDKMS----ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185

Query: 377 IHPNTTSLSGALAACAQVKDLKLGKEIHGYVIRNEIELSTGVGSALISMYSACGSLEIAC 198
           + P+         AC+++K+ ++GK+++ Y++    E ++ V  +++ M+  CG ++IA 
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245

Query: 197 SVFNELSRKDVVIWNSIIAACAKSGFGVGALNLMRGLASSNLRPDTVT 54
             F E+  KDV +WN +++     G    AL  +  +  S ++PD VT
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT 293



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 48/145 (33%), Positives = 81/145 (55%)
 Frame = -2

Query: 824  ALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSLV 645
            AL + R+M  + V+ N VT+ S +  C+ L+  + GKEIH + I+   LD+   + NSL+
Sbjct: 584  ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG-LDTCNFILNSLI 642

Query: 644  DLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDVI 465
            D+Y +C  +  +R+ F  + Q+DLVSWN M++ Y   G   DA+ L       G++ + I
Sbjct: 643  DMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHI 702

Query: 464  TWNGLLTGFTKYGDGKTAQEFFYKM 390
            T+  LL+  +  G  +   ++F  M
Sbjct: 703  TFTNLLSACSHSGLIEEGWKYFKMM 727



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/114 (26%), Positives = 58/114 (50%)
 Frame = -2

Query: 344 LAACAQVKDLKLGKEIHGYVIRNEIELSTGVGSALISMYSACGSLEIACSVFNELSRKDV 165
           L  C ++ +L+LG ++H  ++ N +++   +GS L+ +Y   G +E A  +F+++S ++V
Sbjct: 96  LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNV 155

Query: 164 VIWNSIIAACAKSGFGVGALNLMRGLASSNLRPDTVTMVSALPACSRLASVRHG 3
             W +I+      G     + L   + +  +RPD         ACS L + R G
Sbjct: 156 FSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 209


>emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  239 bits (610), Expect = 6e-61
 Identities = 122/283 (43%), Positives = 177/283 (62%), Gaps = 8/283 (2%)
 Frame = -2

Query: 827  KALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSL 648
            KAL +FRKM+  GVKPN +TIAS VS CTNLSL +HG+EIHGYCIK  ELDSDLLVGNSL
Sbjct: 195  KALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSL 254

Query: 647  VDLYTKCQYLDVARKKFSRIKQKDLVSWNAMLA--GYATKGCRDDAIELLHEMEL----- 489
            VD Y KC+ ++VAR+KF  IKQ DLVSWNAMLA  G+   G    A+E    M +     
Sbjct: 255  VDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVF 314

Query: 488  -QGVETDVITWNGLLTGFTKYGDGKTAQEFFYKMCMKGIHPNTTSLSGALAACAQVKDLK 312
             +    DV+ WN +++   + G    A +   +M +  +  NT ++  AL AC+++  L+
Sbjct: 315  SELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALR 374

Query: 311  LGKEIHGYVIRNEIELSTGVGSALISMYSACGSLEIACSVFNELSRKDVVIWNSIIAACA 132
             GKEIH ++IR  ++    + ++LI MY  CGS++ +  +F+ + ++D+V WN +I+   
Sbjct: 375  QGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYG 434

Query: 131  KSGFGVGALNLMRGLASSNLRPDTVTMVSALPACSRLASVRHG 3
              GFG+ A+NL +   +  L+P+ +T  + L ACS    +  G
Sbjct: 435  MHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 477



 Score =  169 bits (427), Expect = 9e-40
 Identities = 102/315 (32%), Positives = 161/315 (51%), Gaps = 44/315 (13%)
 Frame = -2

Query: 815 IFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSLVDLY 636
           +F  M+  GV+P+      V   C+ L  Y+ GK+++ Y +     + +  V  S++D++
Sbjct: 98  LFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIG-FEGNSCVKGSILDMF 156

Query: 635 TKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDVITWN 456
            KC  +D+AR+ F  I+ KD+  WN M++GY +KG    A+ +  +M L+GV+       
Sbjct: 157 IKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVK------- 209

Query: 455 GLLTGFTKYGDGKTAQEFFYKMCMKGIHPNTTSLSGALAACAQVKDLKLGKEIHGYVIR- 279
                                       PN+ +++ A++AC  +  L+ G+EIHGY I+ 
Sbjct: 210 ----------------------------PNSITIASAVSACTNLSLLRHGREIHGYCIKV 241

Query: 278 NEIELSTGVGSALISMYSACGSLE------------------------------------ 207
            E++    VG++L+  Y+ C S+E                                    
Sbjct: 242 EELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAAL 301

Query: 206 -------IACSVFNELSRKDVVIWNSIIAACAKSGFGVGALNLMRGLASSNLRPDTVTMV 48
                  IACSVF+ELS +DVV+WNSII+ACA+SG  V AL+L+R +  SN+  +TVTMV
Sbjct: 302 EFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMV 361

Query: 47  SALPACSRLASVRHG 3
           SALPACS+LA++R G
Sbjct: 362 SALPACSKLAALRQG 376



 Score =  108 bits (270), Expect = 1e-21
 Identities = 52/185 (28%), Positives = 102/185 (55%)
 Frame = -2

Query: 557 MLAGYATKGCRDDAIELLHEMELQGVETDVITWNGLLTGFTKYGDGKTAQEFFYKMCMKG 378
           +L  Y   GC +DA  +  +M     E +V +W  ++  +   GD +   + FY M  +G
Sbjct: 51  LLEVYCQTGCVEDARRMFDKMS----ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 106

Query: 377 IHPNTTSLSGALAACAQVKDLKLGKEIHGYVIRNEIELSTGVGSALISMYSACGSLEIAC 198
           + P+         AC+++K+ ++GK+++ Y++    E ++ V  +++ M+  CG ++IA 
Sbjct: 107 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 166

Query: 197 SVFNELSRKDVVIWNSIIAACAKSGFGVGALNLMRGLASSNLRPDTVTMVSALPACSRLA 18
             F E+  KDV +WN +++     G    ALN+ R +    ++P+++T+ SA+ AC+ L+
Sbjct: 167 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLS 226

Query: 17  SVRHG 3
            +RHG
Sbjct: 227 LLRHG 231



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 48/145 (33%), Positives = 82/145 (56%)
 Frame = -2

Query: 824 ALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSLV 645
           AL + R+M  + V+ N VT+ S +  C+ L+  + GKEIH + I+   LD+   + NSL+
Sbjct: 341 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG-LDTCNFILNSLI 399

Query: 644 DLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDVI 465
           D+Y +C  +  +R+ F  + Q+DLVSWN M++ Y   G   DA+ L  +    G++ + I
Sbjct: 400 DMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHI 459

Query: 464 TWNGLLTGFTKYGDGKTAQEFFYKM 390
           T+  LL+  +  G  +   ++F  M
Sbjct: 460 TFTNLLSACSHSGLIEEGWKYFKMM 484



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/114 (26%), Positives = 58/114 (50%)
 Frame = -2

Query: 344 LAACAQVKDLKLGKEIHGYVIRNEIELSTGVGSALISMYSACGSLEIACSVFNELSRKDV 165
           L  C ++ +L+LG ++H  ++ N +++   +GS L+ +Y   G +E A  +F+++S ++V
Sbjct: 17  LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNV 76

Query: 164 VIWNSIIAACAKSGFGVGALNLMRGLASSNLRPDTVTMVSALPACSRLASVRHG 3
             W +I+      G     + L   + +  +RPD         ACS L + R G
Sbjct: 77  FSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 130


>ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543299|gb|EEF44831.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 628

 Score =  197 bits (501), Expect = 2e-48
 Identities = 105/281 (37%), Positives = 167/281 (59%), Gaps = 6/281 (2%)
 Frame = -2

Query: 827  KALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSL 648
            +AL IF +M+ +G +P+ VT+ASVVS C +L+  + G EIH   +K  +L  DL++ N+L
Sbjct: 235  EALEIFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNAL 294

Query: 647  VDLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDV 468
            VD+Y KC  ++ AR  F R+  +++VS  +M++GYA       A  L  +M    +E +V
Sbjct: 295  VDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKM----IERNV 350

Query: 467  ITWNGLLTGFTKYGDGKTAQEFFYKMCMKGIHPNTTSLSGALAACAQVKDLKLGKEIHGY 288
            ++WN L+ G+T+ G+ + A   F  +  + I P   +    L ACA + DL+LG++ H +
Sbjct: 351  VSWNALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAH 410

Query: 287  VIRNEIELSTG------VGSALISMYSACGSLEIACSVFNELSRKDVVIWNSIIAACAKS 126
            V+++      G      VG+ALI MY  CGS+E  C +F  +  +D V WN++I   A++
Sbjct: 411  VLKHGFRFQYGEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQN 470

Query: 125  GFGVGALNLMRGLASSNLRPDTVTMVSALPACSRLASVRHG 3
            G+G+ AL L R + +S  +PD VTM+ AL ACS    V+ G
Sbjct: 471  GYGMEALGLFRKMLASGEKPDHVTMIGALCACSHAGLVQEG 511



 Score =  160 bits (405), Expect = 3e-37
 Identities = 86/254 (33%), Positives = 139/254 (54%)
 Frame = -2

Query: 764 ASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSLVDLYTKCQYLDVARKKFSRIK 585
           A ++ +C      +  + IH   IKT +   ++ + N L+D Y KC   D ARK F ++ 
Sbjct: 23  AKLLDSCLKSKSLRDTRRIHARIIKT-QFAYEVFIQNRLIDAYGKCGCFDDARKIFDQMP 81

Query: 584 QKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDVITWNGLLTGFTKYGDGKTAQE 405
           +K++ SWNA+++     G  D+   L   M     E D  +WN L+ GF ++   + A  
Sbjct: 82  EKNVFSWNAIVSTLVKSGFLDEGARLFVSMP----EPDQCSWNSLIAGFAQHDRFEEALN 137

Query: 404 FFYKMCMKGIHPNTTSLSGALAACAQVKDLKLGKEIHGYVIRNEIELSTGVGSALISMYS 225
           +F KM  KG   N  +    L+ACA +KDLK+G +IHG +++++  L   +GSALI +YS
Sbjct: 138 YFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYS 197

Query: 224 ACGSLEIACSVFNELSRKDVVIWNSIIAACAKSGFGVGALNLMRGLASSNLRPDTVTMVS 45
            CG ++ A  VF+ +  ++VV WNS+I    ++G    AL +   +  S   PD VT+ S
Sbjct: 198 KCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMMESGFEPDEVTLAS 257

Query: 44  ALPACSRLASVRHG 3
            + AC+ LA+ + G
Sbjct: 258 VVSACASLAAAKQG 271



 Score =  111 bits (278), Expect = 2e-22
 Identities = 77/279 (27%), Positives = 138/279 (49%), Gaps = 4/279 (1%)
 Frame = -2

Query: 827 KALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSL 648
           +AL  F KM   G   N  T  S +S C  L   + G +IHG  +K+  L  D+ +G++L
Sbjct: 134 EALNYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFL-LDVYMGSAL 192

Query: 647 VDLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDV 468
           +D+Y+KC ++D A++ F  + ++++VSWN+++  Y   G   +A+E+   M   G E D 
Sbjct: 193 IDIYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMMESGFEPDE 252

Query: 467 ITWNGLLTGFTKYGDGKTAQEFFYKMCMKGIHPNTTSLSGAL----AACAQVKDLKLGKE 300
           +T   +++        K   E    +  +    +   LS AL    A C ++ + +    
Sbjct: 253 VTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARC--V 310

Query: 299 IHGYVIRNEIELSTGVGSALISMYSACGSLEIACSVFNELSRKDVVIWNSIIAACAKSGF 120
                IRN +       ++++S Y+   S++ A  +F ++  ++VV WN++IA   ++G 
Sbjct: 311 FDRMPIRNVVS-----ETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQNGE 365

Query: 119 GVGALNLMRGLASSNLRPDTVTMVSALPACSRLASVRHG 3
              AL L R L    + P   T  + L AC+ LA ++ G
Sbjct: 366 NEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLG 404



 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
 Frame = -2

Query: 827 KALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAEL-----DSDLL 663
           +AL +FR +    + P   T  ++++ C NL+  Q G++ H + +K         +SD+ 
Sbjct: 368 EALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEESDVF 427

Query: 662 VGNSLVDLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQG 483
           VGN+L+D+Y KC  ++   + F  + ++D VSWNAM+ GYA  G   +A+ L  +M   G
Sbjct: 428 VGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNGYGMEALGLFRKMLASG 487

Query: 482 VETDVITWNGLLTGFTKYGDGKTAQEFFYKM 390
            + D +T  G L   +  G  +  ++ F  M
Sbjct: 488 EKPDHVTMIGALCACSHAGLVQEGRKHFSSM 518


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
            [Vitis vinifera]
          Length = 684

 Score =  192 bits (489), Expect = 6e-47
 Identities = 100/281 (35%), Positives = 166/281 (59%), Gaps = 6/281 (2%)
 Frame = -2

Query: 827  KALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSL 648
            +AL +F +M+ +G++P+ VT+ASVVS C +L   + G +IH   +KT +   DL++GN+L
Sbjct: 231  EALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNAL 290

Query: 647  VDLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDV 468
            VD+Y KC  ++ AR+ F R+  +++VS  +M++GYA    R  +++    M  +  + +V
Sbjct: 291  VDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYA----RAASVKAARFMFSKMTQRNV 346

Query: 467  ITWNGLLTGFTKYGDGKTAQEFFYKMCMKGIHPNTTSLSGALAACAQVKDLKLGKEIHGY 288
            ++WN L+ G+T+ G+ + A   F  +  + I P   +    L+ACA + DL LG++ H +
Sbjct: 347  VSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTH 406

Query: 287  VIRNEIELSTG------VGSALISMYSACGSLEIACSVFNELSRKDVVIWNSIIAACAKS 126
            V++   E  +G      VG++LI MY  CGS+E    VF ++  +D V WN+II   A++
Sbjct: 407  VLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQN 466

Query: 125  GFGVGALNLMRGLASSNLRPDTVTMVSALPACSRLASVRHG 3
            G+G  AL + R +     +PD VTM+  L ACS    V  G
Sbjct: 467  GYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEG 507



 Score =  154 bits (388), Expect = 3e-35
 Identities = 82/260 (31%), Positives = 139/260 (53%)
 Frame = -2

Query: 782 PNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSLVDLYTKCQYLDVARK 603
           PN    A ++ +C      +  + +H   + T +   ++ + N L+D+Y KC  LD ARK
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMT-QFSMEIFIQNRLIDVYGKCDCLDDARK 71

Query: 602 KFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDVITWNGLLTGFTKYGD 423
            F R+ Q++  +WN++++     G  D+A  L   M     E D  +WN +++GF ++  
Sbjct: 72  LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVSGFAQHDR 127

Query: 422 GKTAQEFFYKMCMKGIHPNTTSLSGALAACAQVKDLKLGKEIHGYVIRNEIELSTGVGSA 243
            + + E+F KM  +    N  S   AL+ACA + DL +G ++H  V ++       +GSA
Sbjct: 128 FEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSA 187

Query: 242 LISMYSACGSLEIACSVFNELSRKDVVIWNSIIAACAKSGFGVGALNLMRGLASSNLRPD 63
           LI MYS CGS+  A  VF+ +  +++V WNS+I    ++G    AL +   +  S L PD
Sbjct: 188 LIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPD 247

Query: 62  TVTMVSALPACSRLASVRHG 3
            VT+ S + AC+ L +++ G
Sbjct: 248 EVTLASVVSACASLCALKEG 267



 Score =  101 bits (252), Expect = 2e-19
 Identities = 75/307 (24%), Positives = 135/307 (43%), Gaps = 32/307 (10%)
 Frame = -2

Query: 827 KALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKTAELDSDLLVGNSL 648
           ++L  F KM       N  +  S +S C  L     G ++H    K+    +D+ +G++L
Sbjct: 130 ESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKS-RYSTDVYMGSAL 188

Query: 647 VDLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQGVETDV 468
           +D+Y+KC  +  A + FS +                                   +E ++
Sbjct: 189 IDMYSKCGSVACAEEVFSGM-----------------------------------IERNL 213

Query: 467 ITWNGLLTGFTKYGDGKTAQEFFYKMCMKGIHPNTTSLSGALAACAQVKDLKLGKEIHGY 288
           +TWN L+T + + G    A E F +M   G+ P+  +L+  ++ACA +  LK G +IH  
Sbjct: 214 VTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHAR 273

Query: 287 VIR-NEIELSTGVGSALISMYSAC-------------------------------GSLEI 204
           V++ N+      +G+AL+ MY+ C                                S++ 
Sbjct: 274 VVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKA 333

Query: 203 ACSVFNELSRKDVVIWNSIIAACAKSGFGVGALNLMRGLASSNLRPDTVTMVSALPACSR 24
           A  +F+++++++VV WN++IA   ++G    AL L R L   ++ P   T  + L AC+ 
Sbjct: 334 ARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACAN 393

Query: 23  LASVRHG 3
           LA +  G
Sbjct: 394 LADLLLG 400



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 61/241 (25%), Positives = 113/241 (46%), Gaps = 6/241 (2%)
 Frame = -2

Query: 827 KALCIFRKMLAAGVKPNLVTIASVVSTCTNLSLYQHGKEIHGYCIKT-----AELDSDLL 663
           +AL +FR +    + P   T  +++S C NL+    G++ H + +K      +  +SD+ 
Sbjct: 364 EALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIF 423

Query: 662 VGNSLVDLYTKCQYLDVARKKFSRIKQKDLVSWNAMLAGYATKGCRDDAIELLHEMELQG 483
           VGNSL+D+Y KC  ++   + F ++K++D VSWNA++ GYA  G   +A+++  +M + G
Sbjct: 424 VGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCG 483

Query: 482 VETDVITWNGLLTGFTKYGDGKTAQEFFYKMCMKGIHPNTTSLSGALAACAQVKDLKLGK 303
            + D +T  G+L   +  G  +  + +F+ M   G+ P              +KD     
Sbjct: 484 EKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIP--------------LKDHY--- 526

Query: 302 EIHGYVIRNEIELSTGVGSALISMYSACGSLEIACSVFNELS-RKDVVIWNSIIAACAKS 126
                             + ++ +    G L  A ++   +    D V+W S++AAC   
Sbjct: 527 ------------------TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVH 568

Query: 125 G 123
           G
Sbjct: 569 G 569