BLASTX nr result

ID: Panax21_contig00018765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018765
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530951.1| conserved hypothetical protein [Ricinus comm...   171   2e-40
ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinif...   170   2e-40
ref|XP_002319735.1| f-box family protein [Populus trichocarpa] g...   170   3e-40
emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]   168   9e-40
gb|AFK35084.1| unknown [Lotus japonicus]                              159   6e-37

>ref|XP_002530951.1| conserved hypothetical protein [Ricinus communis]
           gi|223529466|gb|EEF31423.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  171 bits (432), Expect = 2e-40
 Identities = 102/231 (44%), Positives = 129/231 (55%), Gaps = 4/231 (1%)
 Frame = -2

Query: 681 MAVLPVELWRRILEIGVIERFPKSLNYKDLCSLSICCTTLNRLSNEXXXXXXXXXXXXXX 502
           M+ LP ELWR+I+E G+      + +YKDLC +SICC  L+RLSNE              
Sbjct: 1   MSGLPDELWRQIIEFGIRS---SNFSYKDLCCISICCRRLHRLSNEHSFWSHFLSSDFPP 57

Query: 501 XXXXXXXXXXXXXXXXXXL----YKLWFERDRARKLLAHRRAVLRIESRIAEHSRRILEI 334
                                  YK+ FE++R +K+ AHRRAVLR ES I E  R+I +I
Sbjct: 58  SPQQQQHQQNPNPNNYTSTAKSTYKIRFEKEREKKVAAHRRAVLRKESEIMERERKIRDI 117

Query: 333 KHILVAETEKMKSTILELSNLRNVRQASVALNVWXXXXXXXXXXXXXXXXXXXXXXXXXX 154
           ++ L  E++KM+ T  ELSNL  VRQASVALN                            
Sbjct: 118 EYRLCQESDKMRDTANELSNLHKVRQASVALN---------------------------- 149

Query: 153 VALNVWQPEVVRGRQKQIVEQCVVNVDSRISALDMELKLCKQQIAGFDKAH 1
               VWQPEVVRGRQKQ+VEQCVV+ +SR+ +L+MELKLCKQQI GF+KAH
Sbjct: 150 ----VWQPEVVRGRQKQLVEQCVVSFESRVHSLEMELKLCKQQIVGFNKAH 196


>ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinifera]
           gi|296085868|emb|CBI31192.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  170 bits (431), Expect = 2e-40
 Identities = 106/228 (46%), Positives = 130/228 (57%), Gaps = 1/228 (0%)
 Frame = -2

Query: 681 MAVLPVELWRRILEIGVIERFPKSLNYKDLCSLSICCTTLNRLSNEXXXXXXXXXXXXXX 502
           MA LP E+WR+ILEIG+      +L YKDLC +SI C  L+RLSN+              
Sbjct: 1   MADLPDEMWRQILEIGIRS---SNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFPH 57

Query: 501 XXXXXXXXXXXXXXXXXXL-YKLWFERDRARKLLAHRRAVLRIESRIAEHSRRILEIKHI 325
                             L Y++ F+R+RARK  AHRRAVLR+ES+IA H R + EI+  
Sbjct: 58  TEASVSNGTVSSSSLSPKLMYRIKFDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMK 117

Query: 324 LVAETEKMKSTILELSNLRNVRQASVALNVWXXXXXXXXXXXXXXXXXXXXXXXXXXVAL 145
           L  ETEKMK+ + EL NLR VRQASVAL                                
Sbjct: 118 LTEETEKMKAAVTELPNLRKVRQASVAL-------------------------------- 145

Query: 144 NVWQPEVVRGRQKQIVEQCVVNVDSRISALDMELKLCKQQIAGFDKAH 1
           NVWQPEV+RG QKQ+V QCVV VD+RI+AL+MELKLC+QQIAG D A+
Sbjct: 146 NVWQPEVIRGWQKQMVGQCVVPVDARINALEMELKLCRQQIAGSDNAY 193


>ref|XP_002319735.1| f-box family protein [Populus trichocarpa]
           gi|222858111|gb|EEE95658.1| f-box family protein
           [Populus trichocarpa]
          Length = 273

 Score =  170 bits (430), Expect = 3e-40
 Identities = 102/227 (44%), Positives = 128/227 (56%)
 Frame = -2

Query: 681 MAVLPVELWRRILEIGVIERFPKSLNYKDLCSLSICCTTLNRLSNEXXXXXXXXXXXXXX 502
           M  +P ELWR+ILE+G+       LNYKDLC +SI C  L+RLS E              
Sbjct: 1   MGGVPDELWRQILEMGIQN---SKLNYKDLCCISISCRRLHRLSAENSLWLLLLSSDFPS 57

Query: 501 XXXXXXXXXXXXXXXXXXLYKLWFERDRARKLLAHRRAVLRIESRIAEHSRRILEIKHIL 322
                              YK+ FER+++RK+ AHRRAVLR ES + E  R+I EI++ L
Sbjct: 58  PNQQNPNPNNSTSASAKSTYKIKFEREKSRKVAAHRRAVLRKESEVLEFERKIREIENGL 117

Query: 321 VAETEKMKSTILELSNLRNVRQASVALNVWXXXXXXXXXXXXXXXXXXXXXXXXXXVALN 142
             ETEKM++T  ELSNL  VRQASVAL                                N
Sbjct: 118 RQETEKMRATAAELSNLHKVRQASVAL--------------------------------N 145

Query: 141 VWQPEVVRGRQKQIVEQCVVNVDSRISALDMELKLCKQQIAGFDKAH 1
           VWQPEV+RGRQKQIVEQ  V V+SR+ +L+MELKLC+Q+I+GFDKA+
Sbjct: 146 VWQPEVIRGRQKQIVEQSAVPVESRVHSLEMELKLCRQRISGFDKAY 192


>emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]
          Length = 256

 Score =  168 bits (426), Expect = 9e-40
 Identities = 105/228 (46%), Positives = 129/228 (56%), Gaps = 1/228 (0%)
 Frame = -2

Query: 681 MAVLPVELWRRILEIGVIERFPKSLNYKDLCSLSICCTTLNRLSNEXXXXXXXXXXXXXX 502
           MA LP E+WR+ILEIG+      +L YKDLC +SI C  L+RLSN+              
Sbjct: 1   MADLPDEMWRQILEIGIRS---SNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFPH 57

Query: 501 XXXXXXXXXXXXXXXXXXL-YKLWFERDRARKLLAHRRAVLRIESRIAEHSRRILEIKHI 325
                             L Y++ F+R+RARK  AHRRAVLR+ES+IA H R + EI+  
Sbjct: 58  TEASVSNGTVSSSSLSPKLMYRIKFDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMK 117

Query: 324 LVAETEKMKSTILELSNLRNVRQASVALNVWXXXXXXXXXXXXXXXXXXXXXXXXXXVAL 145
           L  ETEKMK+ + EL NLR VRQASVAL                                
Sbjct: 118 LTEETEKMKAAVTELPNLRKVRQASVAL-------------------------------- 145

Query: 144 NVWQPEVVRGRQKQIVEQCVVNVDSRISALDMELKLCKQQIAGFDKAH 1
           NVWQPEV+RG QKQ+V QCVV VD+RI+AL+MEL LC+QQIAG D A+
Sbjct: 146 NVWQPEVIRGWQKQMVGQCVVPVDARINALEMELXLCRQQIAGXDNAY 193


>gb|AFK35084.1| unknown [Lotus japonicus]
          Length = 257

 Score =  159 bits (402), Expect = 6e-37
 Identities = 98/227 (43%), Positives = 122/227 (53%)
 Frame = -2

Query: 681 MAVLPVELWRRILEIGVIERFPKSLNYKDLCSLSICCTTLNRLSNEXXXXXXXXXXXXXX 502
           M+ LP ELWRRILEIGV         YKDLC +SI C   +RLS++              
Sbjct: 13  MSSLPEELWRRILEIGVES---SGFTYKDLCCISISCRRFHRLSSDDSLWNPLLSSDFPS 69

Query: 501 XXXXXXXXXXXXXXXXXXLYKLWFERDRARKLLAHRRAVLRIESRIAEHSRRILEIKHIL 322
                              YKL FERD+ R++ AH+R VLR ES++AEHSR++  I+  +
Sbjct: 70  LTPPSSSSTSPSAKSL---YKLRFERDKERRIAAHKRVVLRKESQVAEHSRKLRNIQTRV 126

Query: 321 VAETEKMKSTILELSNLRNVRQASVALNVWXXXXXXXXXXXXXXXXXXXXXXXXXXVALN 142
             E+ K   T +ELS+LR +RQASVALN                                
Sbjct: 127 AEESIKAGETAVELSSLRRIRQASVALN-------------------------------- 154

Query: 141 VWQPEVVRGRQKQIVEQCVVNVDSRISALDMELKLCKQQIAGFDKAH 1
           VWQPEVVRGRQKQ+VEQC V  +SRI AL+MEL+LCKQQI G +K H
Sbjct: 155 VWQPEVVRGRQKQMVEQCAVPAESRIHALEMELRLCKQQIMGLEKYH 201


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