BLASTX nr result

ID: Panax21_contig00018754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018754
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511558.1| conserved hypothetical protein [Ricinus comm...   129   3e-28
gb|ABK93021.1| unknown [Populus trichocarpa]                          129   3e-28
ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
dbj|BAH58381.1| AtEB1b-like protein [Nicotiana tabacum]               123   2e-26
ref|XP_002330097.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25

>ref|XP_002511558.1| conserved hypothetical protein [Ricinus communis]
           gi|223550673|gb|EEF52160.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  129 bits (323), Expect = 3e-28
 Identities = 69/107 (64%), Positives = 81/107 (75%), Gaps = 5/107 (4%)
 Frame = +1

Query: 1   SLQANNSHND-----LGNGIETNQGKTNALASGANFVEERQTLTTEITELKLSVDLLEKE 165
           SLQ+NN HN      L       QG+ + +A GAN   E QTL+ E+T+LKLSVD LEKE
Sbjct: 125 SLQSNNMHNSGEPVGLSKMSGPKQGRGSTVAGGANSSVEIQTLSKEVTDLKLSVDHLEKE 184

Query: 166 RDFYFTKLRDIEILCQTPELENLPMSLAIKKILYAADTKESALVEAQ 306
           RDFYF KLRDIE+LCQTPELE++PM++AIKKILYAAD KESAL EAQ
Sbjct: 185 RDFYFAKLRDIELLCQTPELEDIPMAVAIKKILYAADAKESALEEAQ 231


>gb|ABK93021.1| unknown [Populus trichocarpa]
          Length = 276

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 7/109 (6%)
 Frame = +1

Query: 1   SLQANNSHNDL-GNGIETN------QGKTNALASGANFVEERQTLTTEITELKLSVDLLE 159
           SLQANN HN   G+ ++ N      QG+ +A+A GA + EE Q L+ E+T LKLSVD LE
Sbjct: 150 SLQANNLHNSASGDTVDLNKMSGPKQGRGSAVAGGATYSEEIQALSKEVTNLKLSVDHLE 209

Query: 160 KERDFYFTKLRDIEILCQTPELENLPMSLAIKKILYAADTKESALVEAQ 306
           KERDFYF KLRDIEILCQ PE+E+LPM++AIKKILYA D KESAL EAQ
Sbjct: 210 KERDFYFAKLRDIEILCQIPEMEDLPMTVAIKKILYADDAKESALEEAQ 258


>ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|222859277|gb|EEE96824.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  128 bits (321), Expect = 5e-28
 Identities = 69/105 (65%), Positives = 82/105 (78%), Gaps = 3/105 (2%)
 Frame = +1

Query: 1   SLQANNSHNDLGNG-IETNQ--GKTNALASGANFVEERQTLTTEITELKLSVDLLEKERD 171
           SLQANN HN   +  ++ N+  GK +A+A GA + EE Q L+ E+T LKLSVD LEKERD
Sbjct: 150 SLQANNLHNSASSDTVDLNKMSGKGSAVAGGATYSEEIQALSKEVTNLKLSVDHLEKERD 209

Query: 172 FYFTKLRDIEILCQTPELENLPMSLAIKKILYAADTKESALVEAQ 306
           FYF KLRDIEILCQ PE+E+LPM++AIKKILYA D KESAL EAQ
Sbjct: 210 FYFAKLRDIEILCQIPEMEDLPMTVAIKKILYADDAKESALEEAQ 254


>dbj|BAH58381.1| AtEB1b-like protein [Nicotiana tabacum]
          Length = 267

 Score =  123 bits (308), Expect = 2e-26
 Identities = 69/115 (60%), Positives = 83/115 (72%), Gaps = 8/115 (6%)
 Frame = +1

Query: 1   SLQANNSHND-LGNGIET----NQGKTNALASGANFVEERQTLTTEITELKLSVDLLEKE 165
           SLQ NN HN  LG  I       QG+++ +    N   E Q L+ E+T+LKLSVD LEKE
Sbjct: 149 SLQTNNCHNPGLGEDITRITGIKQGRSSPVMGVVNSSAEIQALSKEVTDLKLSVDHLEKE 208

Query: 166 RDFYFTKLRDIEILCQTPELENLPMSLAIKKILYAADTKESALVEAQ---GQSVD 321
           RDFYF KLRDIEILCQTPEL+N+PM++A+KKILYAAD +ESAL EAQ    +SVD
Sbjct: 209 RDFYFAKLRDIEILCQTPELDNVPMAVAVKKILYAADARESALAEAQEFPSESVD 263


>ref|XP_002330097.1| predicted protein [Populus trichocarpa] gi|222871231|gb|EEF08362.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  120 bits (301), Expect = 1e-25
 Identities = 69/107 (64%), Positives = 82/107 (76%), Gaps = 5/107 (4%)
 Frame = +1

Query: 1   SLQANNSHNDL-GNGIETNQ--GKTNALASGANFVEERQTLTTEITELKLSVDLLEKERD 171
           S QA+N HN   G  ++ N+  G+ +A+   AN  EE Q L+ EI ++KLSVDLLEKERD
Sbjct: 150 SQQASNMHNSSSGYTVDLNKMSGRGSAVVGEANSSEEIQALSKEIADMKLSVDLLEKERD 209

Query: 172 FYFTKLRDIEILCQTPELENLPMS--LAIKKILYAADTKESALVEAQ 306
           FYF KLRDIEILCQTPELE+LP+   +AIKKILYAADTKESAL EAQ
Sbjct: 210 FYFAKLRDIEILCQTPELEDLPVRVVVAIKKILYAADTKESALEEAQ 256


Top