BLASTX nr result

ID: Panax21_contig00018749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018749
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus ...   160   6e-37
ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]   156   9e-36
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...   155   3e-35
ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, p...   154   5e-35
ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...   151   3e-34

>ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223543895|gb|EEF45421.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 358

 Score =  160 bits (405), Expect = 6e-37
 Identities = 121/365 (33%), Positives = 176/365 (48%), Gaps = 15/365 (4%)
 Frame = -1

Query: 1148 METLPGEINTDILLRLPIKTLCTLKCVCKPWKTLISSPHFIK------XXXXXXXXXXRQ 987
            M  L  ++   ILLRLP+K+LC  K VCK W  LIS PHFI                  +
Sbjct: 1    MANLVQDVVLHILLRLPVKSLCRFKVVCKSWWLLISDPHFISMHLSLATKNNCINCHRWR 60

Query: 986  LLLATSSLYTLNIIDDESPQFPPPIKLQIPLIR--RGSIELVGSCDGLVCLLHHHHPSTF 813
            L L + SL ++  +  E+      IKL  PL       ++ +GSC+GL+C+     P   
Sbjct: 61   LCLTSFSLPSVYSVGYEASDRAIAIKLGYPLKSDCYDEVKFIGSCNGLLCVA--SEPGVL 118

Query: 812  SLLNPITKEYKTLPDPGSFPPDAKLTLS---GFGYVDLVDDYKVIKIATDNTGVGESMAK 642
             LLNP T+  + +P  G+  P  + +L    GFGY   ++DYK++KI+            
Sbjct: 119  LLLNPSTRAAQEIPRLGNRRPFTQSSLPYMYGFGYAHSINDYKLVKISC------RGCVF 172

Query: 641  VYSAKGNSWKTIQAYFPFRVFPWVKPVYVNGVVHWLCFGGKFPPTHKIIG-FDFVEENFE 465
            VYS K NSW+++   FP+ +      + +NG +HW+    K     +IIG FD VEE F 
Sbjct: 173  VYSVKENSWRSVGG-FPYSILALDPGIQLNGAIHWVVSRSKDSTKSQIIGAFDLVEEKFW 231

Query: 464  ILPLPEKVNQRSIKCLGVLGGCLCIFARKNDPPCLEMWEMLEYGVGESWIKTLTIPRGYD 285
             +P P  V+  +   +GV G CLCI    +     + W M  YG+ +SW K +       
Sbjct: 232  DVPPP--VSVHNFYGIGVFGECLCILPGSDVTSHNDFWVMKRYGIRDSWTKVVI------ 283

Query: 284  SSGIDY--LYPV-CYLKDKILMRVDFKNLVLYDPGEWRFVNLKVKLREGKYECDVAVYEE 114
               I Y  + P+  +   K L+ +D K LVLY   E  + +L ++      E DV  Y E
Sbjct: 284  --NISYFRMKPLGVFDNHKALLEIDGK-LVLYSFREGTYQDLVIQGIPVGIEFDVETYAE 340

Query: 113  SLVSP 99
            SLVSP
Sbjct: 341  SLVSP 345


>ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]
          Length = 408

 Score =  156 bits (395), Expect = 9e-36
 Identities = 135/391 (34%), Positives = 180/391 (46%), Gaps = 20/391 (5%)
 Frame = -1

Query: 1148 METLPGEINTDILLRLPIKTLCTLKCVCKPWKTLISSPHFIKXXXXXXXXXXRQLLLATS 969
            M  L  EI  +ILLRLP+K+L   +CVCK W TLIS P F K             +L   
Sbjct: 1    MVRLAEEIIEEILLRLPVKSLLRFRCVCKAWCTLISQPQFTKAHLCRQRTHPITQILVPP 60

Query: 968  SLYTLNIIDDESPQFPPPIKLQIPL---IRRGSIELVGSCDGLVCLLH-------HHHPS 819
            S+       D  P     + L  PL     +GS  ++ SC GL+CL+        H  P 
Sbjct: 61   SV-------DSQPNDGFSVDLDFPLGLSSSKGSTAILDSCHGLLCLVDGFYGFHIHQPPH 113

Query: 818  TFSLLNPITKEYKTLPDPGSFPPDAKLTLSGFGYVDLVDDYKVIKI----ATDNTGVGES 651
               L NP T++   LP P SF  +    L GFGY    DDYK++++    AT  TG    
Sbjct: 114  ELVLWNPSTRQSNHLPFP-SF-VNYSSCLYGFGYDSYSDDYKIVRVFSLSATHRTGF--- 168

Query: 650  MAKVYSAKGNSWKTIQAYFPFRVFPWVKPVYVNGVVHWLC----FGGKFPPTHKIIGFDF 483
               V+S K N+W+ +QA     V  +    +  G VHWL       GK      I+ F F
Sbjct: 169  --DVFSLKTNNWRRVQATHS-SVIEYELATFFKGSVHWLARRPNGAGK---RCVIVAFSF 222

Query: 482  VEENFEILPLPEKVNQRSIKCLGVLGGCLCIFAR-KNDPPCLEMWEMLEYGVGESWIKTL 306
             EE  + + LP K        L VLG CLC+      D    EMW M EYG  ESW + +
Sbjct: 223  REEKVQEMELPSK---SVFFGLRVLGECLCVAGLCSYDLDSDEMWVMEEYGKKESWKRLI 279

Query: 305  TIPRGY-DSSGIDYLYPVCYLKDKILMRVDFKNLVLYDPGEWRFVNLKVKLREGKYECDV 129
            T P G  D S   +   + +L++  L+ V  + LVL DP E  + N+         + DV
Sbjct: 280  TFPYGTGDDSNGHFPRVLRFLENGPLLVVHAEKLVLCDPKENTWKNITTYKWTKFLQLDV 339

Query: 128  AVYEESLVSPSGYIGQDVARTDNMLEENEGE 36
            A+Y E+LVSP G  G  V    N LE ++ E
Sbjct: 340  ALYVETLVSPYGKNG-TVITVPNTLEISKKE 369


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
            gi|223527542|gb|EEF29664.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 395

 Score =  155 bits (391), Expect = 3e-35
 Identities = 126/381 (33%), Positives = 183/381 (48%), Gaps = 33/381 (8%)
 Frame = -1

Query: 1148 METLPGEINTDILLRLPIKTLCTLKCVCKPWKTLISSPHFIKXXXXXXXXXXRQLLLATS 969
            M  +P +I +D+LL LP+K L   +C+ KP  +LI SP FI             L L   
Sbjct: 1    MSKIPDDIVSDVLLLLPVKALLRFRCLSKPLCSLIDSPDFIDHHLSHSLKTRSNLFLILR 60

Query: 968  --SLYTLNIIDDESPQFPPPIKLQI-PLIRRGSIELVGSCDGLVCLLHHHHPSTFSLLNP 798
              +LYTL+  D  S   P    + I PL + G  E VGSC+GL+ L +       +L NP
Sbjct: 61   DWNLYTLDF-DSLSSVSPAAADVLIHPLQKGGGTEAVGSCNGLLALRNSERD--LALYNP 117

Query: 797  ITKEYKTLPDPGSFPPDAK----LTLSGFGYVDLVDDYKVIKIATDNTGVGES------- 651
             T++YK +P     PPD          GFG+  + +DY++I++AT    VGE        
Sbjct: 118  ATRKYKRVPVSEIEPPDRNSKTGYVFYGFGFDSVSEDYRLIRMATF---VGEDDRCESFD 174

Query: 650  ---MAKVYSAKGNSWKTIQA---YFPFRVFPWVKPVYVNG-------VVHWLC-FGGKFP 513
                 +VYS K +SWK I+    Y  F   P+ + ++  G        +HW+     +  
Sbjct: 175  YEYQVQVYSLKNDSWKRIKGLPYYLRFLYKPFFQVLHRRGYGVFACNALHWVMPHWPELG 234

Query: 512  PTHKIIGFDFVEENFEILPLPE-KVNQRSIKC-LGVLGGCLCIFARKNDPPCLEMWEMLE 339
              + II FD V E F+ +P P    NQ + +   GVL G LC         C+++W M E
Sbjct: 235  VNNSIIAFDIVNETFQQVPQPNWSDNQLNFQVDAGVLEGRLCAMCNCGHE-CIDLWVMEE 293

Query: 338  YGVGESWIKTLTIPRGYDSSGIDYLYPVCYLKD--KILMRVDFKNLVLYDPGEWRFVNLK 165
            YGV ESWIK  +       S + +L P+CY KD  K+L+ V+   LV YD   W   +++
Sbjct: 294  YGVKESWIKLFSFRLSKSMSNLMFLRPLCYSKDREKMLLEVNDHKLVWYD---WNKTSVR 350

Query: 164  -VKLREGKYECDVAVYEESLV 105
             VK++ G      A+   SLV
Sbjct: 351  TVKVKGGPRSFGAAMCVGSLV 371


>ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus
            communis] gi|223529397|gb|EEF31360.1| Transitional
            endoplasmic reticulum ATPase, putative [Ricinus communis]
          Length = 1029

 Score =  154 bits (389), Expect = 5e-35
 Identities = 125/369 (33%), Positives = 179/369 (48%), Gaps = 19/369 (5%)
 Frame = -1

Query: 1148 METLPGEINTDILLRLPIKTLCTLKCVCKPWKT-----LISSPHFIKXXXXXXXXXXR-- 990
            M  LP +I TDIL RLP+K+L   KCV K W +     LI    F +             
Sbjct: 622  MALLPHDIITDILSRLPVKSLFWFKCVSKHWLSKHWLSLIGDRGFAEKHLHRVLEDEGIH 681

Query: 989  QLLLAT----SSLYTLNIIDDESPQFPPPIKLQIPLIRRGSIELVGSCDGLVCLLHHHHP 822
            Q L A     SSL   N  +D+   F        P      + +VGSC+GL+C+      
Sbjct: 682  QRLFANTVVPSSLGLNNDFEDDLEFFN-----SFPFYGP-DVNIVGSCNGLICIALDL-- 733

Query: 821  STFSLLNPITKEYKTLPDPGSFPPDAKLTLSGFGYVDLVDDYKVIK----IATDNTGVG- 657
            STF +LNP TKE + LPDPGS+P    +   GFGY    DDYKV+K    +     G   
Sbjct: 734  STFFVLNPGTKECRALPDPGSYPDG--VAYYGFGYDASADDYKVLKGHTRVVVKEAGYEH 791

Query: 656  -ESMAKVYSAKGNSWKTIQAYFPFRVFPWVKP-VYVNGVVHWLCFGGKFPPTHKIIGFDF 483
             ES+ KV+S + NSW+TIQ   P    P+  P ++V+G +HW    G  P    I  FD 
Sbjct: 792  HESIVKVFSLRTNSWRTIQDSSP-SYLPYPLPGIFVHGALHWSARHGIEPDYSLIASFDL 850

Query: 482  VEENFEILPLPEKVNQRSIKCLGVLGGCLCIFARKNDPPCLEMWEMLEYGVGESWIKTLT 303
              E F+ +P P+  +++S   LGVL GCL       +     ++ M +Y V +SW K   
Sbjct: 851  AAEKFKEVPEPKGEDRQSFFTLGVLRGCLSYVKTYVEGNISAIYMMNKYNVMDSWTKEFR 910

Query: 302  IPRGYDSSGIDYLYPVCYLKDKIL-MRVDFKNLVLYDPGEWRFVNLKVKLREGKYECDVA 126
                  ++    L P+CY KD ++ M    K L+L  P + + +N+ +++  G +   + 
Sbjct: 911  FASPSATALSPELLPLCYTKDGVIAMMNSSKELLLCSP-KSQMLNV-MEITAGHHNFQMI 968

Query: 125  VYEESLVSP 99
             Y E+LVSP
Sbjct: 969  AYLETLVSP 977


>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
            predicted protein [Populus trichocarpa]
          Length = 364

 Score =  151 bits (382), Expect = 3e-34
 Identities = 131/370 (35%), Positives = 169/370 (45%), Gaps = 21/370 (5%)
 Frame = -1

Query: 1148 METLPGEINTDILLRLPIKTLCTLKCVCKPWKTLISSPHFI----KXXXXXXXXXXRQLL 981
            M  LP +I  DIL  LP+K+L   KCVCKPW+ LIS P F+    K          ++LL
Sbjct: 1    MSKLPQDIIVDILTYLPVKSLVRFKCVCKPWQLLISDPRFVKLHLKRAIEGNNINRQRLL 60

Query: 980  LATSSLYTLNIIDDESPQFPPPIKLQIPLIRRGS-------IELVGSCDGLVCLLHHHHP 822
            +A   LY+    +  S        +++P     S         + GSCDGLVC+ +    
Sbjct: 61   VAAEPLYSSVDFEAASDGDGINAVMELPYPSAASRTESFAFASIRGSCDGLVCIRNGGDV 120

Query: 821  STFSLLNPITKEYKTLPDPGSFPPDAKLTLSGFGYVDLVDDYK-VIKIATDNTGVGESMA 645
                L NP T+E K LP P S        L+G GY   +DDYK VI   T   G  + MA
Sbjct: 121  HDMFLWNPSTRESKKLPKPSSSVQKHGF-LTGLGYDSTIDDYKLVIACLTTANGSHQIMA 179

Query: 644  -KVYSAKGNSWKTIQAYFPFRVFPWVKPVYVNGVVHWL--CFGGKFPPTHKIIGFDFVEE 474
             +V++ K NSW+ IQ             V+ NG +HWL     G       I   D  +E
Sbjct: 180  PEVFTLKTNSWRRIQGIHSGITLEGGAGVFWNGALHWLGKQETGADHDVDVIFSLDVAQE 239

Query: 473  NF-EILPLPEKVNQRSIKCLGVLGGCLCIFARKN-DPPCLEMWEMLEYGVGESWIKTLTI 300
             F   +PLP   N      L + G CLCIF + + D    E W   EYGV  SW +   I
Sbjct: 240  KFMGFVPLP---NHFCTAVLSISGNCLCIFGKLHPDESYFEAWITSEYGVKTSWRRRYAI 296

Query: 299  PRGYDSSGIDYL-YPVCYLKDKILMRVDF--KNLVLYDPGEWRFVNLKVK-LREGKYECD 132
            P  +D   +DY    +C  K  +LM        L LYDP E     L+VK  R+  Y  D
Sbjct: 297  P--FDRLYMDYFSTEMCLTKKGVLMDHHGCPGTLQLYDPVEDATKLLRVKNNRDPMY--D 352

Query: 131  VAVYEESLVS 102
             AVY ESLVS
Sbjct: 353  SAVYTESLVS 362


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