BLASTX nr result

ID: Panax21_contig00018716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018716
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541656.1| PREDICTED: uncharacterized protein LOC100779...   167   6e-40
ref|XP_002266568.2| PREDICTED: uncharacterized protein LOC100255...   166   2e-39
ref|XP_003521727.1| PREDICTED: uncharacterized protein LOC100782...   164   7e-39
ref|XP_002328404.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
ref|XP_003547217.1| PREDICTED: uncharacterized protein LOC100817...   162   2e-38

>ref|XP_003541656.1| PREDICTED: uncharacterized protein LOC100779228 [Glycine max]
          Length = 968

 Score =  167 bits (424), Expect = 6e-40
 Identities = 81/134 (60%), Positives = 101/134 (75%)
 Frame = -2

Query: 415 IGRGSYLIYPRMGETWALFKDWDIGWSSDSENHKKYIFEIVEILSDFSHVTGIKVGYLRK 236
           IGR +Y +YPR GETWALFK+WDI W  D+E+H++Y FE VEILSD+    G+ V YL K
Sbjct: 543 IGRCTYKVYPRKGETWALFKNWDIKWHMDAESHREYDFEFVEILSDYVEGVGVVVSYLAK 602

Query: 235 MEGFVSLFLRIRLGGDAIFVIPSSEMLRFSHRVPSFKMTGAESEGVPEGSFELDPSALPT 56
           ++GFV LF R+  GG+  F IPSSE+ RFSHRVPSFKMTG E  GVP GS+ELDP +LP 
Sbjct: 603 LKGFVCLFSRME-GGNRTFQIPSSELFRFSHRVPSFKMTGQERAGVPVGSYELDPVSLPM 661

Query: 55  NLKELWQPEEEKVE 14
           NL+E+  PE  +V+
Sbjct: 662 NLEEIAVPEHLEVK 675



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
 Frame = -2

Query: 400  YLIYPRMGETWALFKDWDIGWSSDSENHKKYIFEIVEILSDFSHVTGIKVGYLRKMEGFV 221
            Y I+PR GE WAL+++W          + +Y  +IVE++ +      + V  L  + G+ 
Sbjct: 852  YEIFPRKGEIWALYRNWTTKIKRSDLLNLEY--DIVEVVGE--QDLWMDVLPLELVSGYN 907

Query: 220  SLFLRIRLGGDA-IFVIPSSEMLRFSHRVPSFKMTGAESEGVPEGSFELDPSALP 59
            S+F R    G A    I   ++LRFSH++P+F++T  E +G   G +ELDP A+P
Sbjct: 908  SVFKRKSNAGSARATKIYWKDLLRFSHQIPAFELT-EEQDGNLRGFWELDPGAVP 961


>ref|XP_002266568.2| PREDICTED: uncharacterized protein LOC100255461 [Vitis vinifera]
          Length = 1169

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/136 (58%), Positives = 101/136 (74%)
 Frame = -2

Query: 409  RGSYLIYPRMGETWALFKDWDIGWSSDSENHKKYIFEIVEILSDFSHVTGIKVGYLRKME 230
            R SY +YPR GETWA++K+W+  WSS+ E H+KY FE VEILSDF    GI V YL K++
Sbjct: 621  RNSYFVYPRKGETWAIYKNWNTDWSSNPEIHRKYEFEYVEILSDFVPDAGIGVAYLGKVK 680

Query: 229  GFVSLFLRIRLGGDAIFVIPSSEMLRFSHRVPSFKMTGAESEGVPEGSFELDPSALPTNL 50
            GFVSLF +    G  +F IP SE+LRFSHR+PSF+MTG+E EGVP+GSFELDP+ALP NL
Sbjct: 681  GFVSLFRQSVQHGIVLFQIPPSELLRFSHRIPSFRMTGSEGEGVPKGSFELDPAALPNNL 740

Query: 49   KELWQPEEEKVEAQSI 2
             +    ++ K E +S+
Sbjct: 741  NDFSGNDDLKTEKESV 756



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
 Frame = -2

Query: 415  IGRGSYLIYPRMGETWALFKDWDIG-WSSDSENHKKYIFEIVEILSDFSHVTGIKVGYLR 239
            IG+  + I P  G+ WAL+K+W+     SD  N K   ++IVE+L D  H T  KV  L 
Sbjct: 1047 IGKNKFAILPIKGQVWALYKNWENNLMCSDIVNCK---YDIVEVLEDNDHST--KVSVLL 1101

Query: 238  KMEGFVSLFL--RIRLGGDAIFVIPSSEMLRFSHRVPSFKMTGAESEGVPEGSFELDPSA 65
             + GF S++   R +     I  IP  E+ RFSH++P+ + TG E++      +ELDP++
Sbjct: 1102 PLNGFKSVYKAPRRQRSSTGILDIPRDELPRFSHQIPAVRHTG-ENDARLADCWELDPAS 1160

Query: 64   LP 59
            +P
Sbjct: 1161 VP 1162


>ref|XP_003521727.1| PREDICTED: uncharacterized protein LOC100782762 [Glycine max]
          Length = 1051

 Score =  164 bits (415), Expect = 7e-39
 Identities = 75/135 (55%), Positives = 98/135 (72%)
 Frame = -2

Query: 418 GIGRGSYLIYPRMGETWALFKDWDIGWSSDSENHKKYIFEIVEILSDFSHVTGIKVGYLR 239
           G   G+YL+YP+ GETWA+F+ WD+GWSSD E H +Y FE VE+LSDF    GIKV YL 
Sbjct: 546 GSDSGTYLVYPKKGETWAIFRHWDLGWSSDPEKHSEYQFEYVEVLSDFDENAGIKVAYLS 605

Query: 238 KMEGFVSLFLRIRLGGDAIFVIPSSEMLRFSHRVPSFKMTGAESEGVPEGSFELDPSALP 59
           K++GFVSLF R  L   ++F I  +E+ +FSHR+PS+KMTGAE + VP GSFELDP+ LP
Sbjct: 606 KLKGFVSLFQRTVLNRISLFCILPNELYKFSHRIPSYKMTGAERQDVPRGSFELDPAGLP 665

Query: 58  TNLKELWQPEEEKVE 14
            +L E+  P   K++
Sbjct: 666 NSLSEVGDPGVVKMD 680



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
 Frame = -2

Query: 415  IGRGSYLIYPRMGETWALFKDWDIGWSSDSENHKKYIFEIVEILSDFSHVTGIKVGYLRK 236
            +    Y IYPR  E WAL+KD +  +   S N  +    IVE+L+D      + V     
Sbjct: 931  VANNRYEIYPRKCEIWALYKDQN--YELTSSNQGRGECHIVEVLADSYQSIQVVVLVPHG 988

Query: 235  MEGFVSLFLRIRLGGDAIFVIPSSEMLRFSHRVPSFKMTGAESEGVP-EGSFELDPSALP 59
              G +    RI+     +  I   E+ RFSH++P+F+     S+ V   G +ELDPS++P
Sbjct: 989  NSGTIFKAPRIQRSKTGVIEILRKEVGRFSHQIPAFQ----HSDNVHLRGCWELDPSSVP 1044


>ref|XP_002328404.1| predicted protein [Populus trichocarpa] gi|222838119|gb|EEE76484.1|
           predicted protein [Populus trichocarpa]
          Length = 974

 Score =  164 bits (415), Expect = 7e-39
 Identities = 77/140 (55%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
 Frame = -2

Query: 418 GIGRGSYLIYPRMGETWALFKDWDIGWSSDSENHKK-YIFEIVEILSDFSHVTGIKVGYL 242
           G  RGSYLIYP+ GETWALFKDW++ WSS+ E H+  Y FE VE+LSDF    GI V YL
Sbjct: 558 GNSRGSYLIYPQKGETWALFKDWEVKWSSEPEKHRPPYRFEFVEVLSDFDENFGIGVAYL 617

Query: 241 RKMEGFVSLFLRIRLGGDAIFVIPSSEMLRFSHRVPSFKMTGAESEGVPEGSFELDPSAL 62
           +K+ GFVS+F R        F IP +E+ +FSHR+PSF+M+G E +GVP GSFELDP++L
Sbjct: 618 QKVNGFVSIFRRAARDRVIQFCIPPTELYKFSHRIPSFRMSGKEGDGVPAGSFELDPASL 677

Query: 61  PTNLKELWQPEEEKVEAQSI 2
           P+NL +L  P + K+E +++
Sbjct: 678 PSNLDDLSDPSDTKLEKENV 697



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
 Frame = -2

Query: 415  IGRGSYLIYPRMGETWALFKDWDIGWSSDSENHKKYIFEIVEILSDFSHVTGIKVGYLRK 236
            IG   Y I+PR GE WAL+K+W+    SD    +  I E++E       V  +    + +
Sbjct: 846  IGNSKYEIHPRKGEIWALYKNWNSESCSDQSVGESDIVELLEDNECSVKVVVLIPARVSE 905

Query: 235  MEGFVSLFL---RIRLGGDAIFVIPSSEMLRFSHRVPSFKMTGAESEGVPEGSFELDPSA 65
              G    F    RI+     +  IP +E  RFSH+  +FK  G E    P   +E+DPS+
Sbjct: 906  SPGRNKCFYWAPRIQRSKTGVLDIPRAEFCRFSHQCSAFKHAG-EKGKCPRSYWEIDPSS 964

Query: 64   LPTN 53
            + +N
Sbjct: 965  IISN 968


>ref|XP_003547217.1| PREDICTED: uncharacterized protein LOC100817232 [Glycine max]
          Length = 968

 Score =  162 bits (411), Expect = 2e-38
 Identities = 79/134 (58%), Positives = 101/134 (75%)
 Frame = -2

Query: 415 IGRGSYLIYPRMGETWALFKDWDIGWSSDSENHKKYIFEIVEILSDFSHVTGIKVGYLRK 236
           IGR +Y +YPR GETWALFK+WDI W  D+E+H++Y +E VEILSD+    G+ V YL K
Sbjct: 543 IGRCTYKVYPRKGETWALFKNWDIKWHMDAESHRQYEYEFVEILSDYVEGVGVVVLYLAK 602

Query: 235 MEGFVSLFLRIRLGGDAIFVIPSSEMLRFSHRVPSFKMTGAESEGVPEGSFELDPSALPT 56
           ++GFVSLF R+  GG+  F IPS+E+ RFSHRVPSFKMTG E  GVP GS+ELDP +LP 
Sbjct: 603 LKGFVSLFSRME-GGNCTFQIPSTELFRFSHRVPSFKMTGQERVGVPVGSYELDPVSLPM 661

Query: 55  NLKELWQPEEEKVE 14
           NL+E+   E  +V+
Sbjct: 662 NLEEIAVAEHLEVK 675



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
 Frame = -2

Query: 400  YLIYPRMGETWALFKDWDIGWSSDSENHKKYIFEIVEILSDFSHVTGIKVGYLRKMEGFV 221
            Y I+PR GE WAL+++W          + +Y  +IVE++ +  H   + V  L  + G+ 
Sbjct: 852  YEIFPREGEIWALYRNWTTKIKRSDLLNLEY--DIVEVVGE--HDLWMDVLPLELVSGYN 907

Query: 220  SLFLRIRLGGDA-IFVIPSSEMLRFSHRVPSFKMTGAESEGVPEGSFELDPSALP 59
            S+F R    G A    I   ++LRFSH++P+FK+T  E +G   G +ELDP A+P
Sbjct: 908  SVFKRKSNAGSARATKIYWKDLLRFSHQIPAFKLT-EEQDGTLRGFWELDPGAVP 961


Top