BLASTX nr result

ID: Panax21_contig00018687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018687
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319892.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
ref|XP_002520018.1| chromosome region maintenance protein 1/expo...   123   5e-26
ref|XP_002325460.1| predicted protein [Populus trichocarpa] gi|2...   123   5e-26
ref|XP_003633992.1| PREDICTED: exportin-1 isoform 3 [Vitis vinif...   117   3e-24
ref|XP_003633991.1| PREDICTED: exportin-1 isoform 2 [Vitis vinif...   117   3e-24

>ref|XP_002319892.1| predicted protein [Populus trichocarpa] gi|222858268|gb|EEE95815.1|
           predicted protein [Populus trichocarpa]
          Length = 1076

 Score =  125 bits (314), Expect = 1e-26
 Identities = 64/89 (71%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
 Frame = +2

Query: 476 NPQITKPTFGWIHTQMPLLHGVADGFGS-LLQRHQLYATPMSRLRLLMICRMAKPEEVLI 652
           NP +     G    QMPLLHG+ DG GS +LQR QLYATPMS+LR+LMICRMAKPEEVLI
Sbjct: 380 NPAVAVNMMG---LQMPLLHGMVDGLGSQILQRRQLYATPMSKLRMLMICRMAKPEEVLI 436

Query: 653 IEDENGNIVRETMKDNDVLVQYKVVHSYL 739
           +EDENGNIVRETMKDNDVLVQYK++   L
Sbjct: 437 VEDENGNIVRETMKDNDVLVQYKIMRETL 465


>ref|XP_002520018.1| chromosome region maintenance protein 1/exportin, putative [Ricinus
           communis] gi|223540782|gb|EEF42342.1| chromosome region
           maintenance protein 1/exportin, putative [Ricinus
           communis]
          Length = 1069

 Score =  123 bits (309), Expect = 5e-26
 Identities = 63/89 (70%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
 Frame = +2

Query: 476 NPQITKPTFGWIHTQMPLLHGVADGFGS-LLQRHQLYATPMSRLRLLMICRMAKPEEVLI 652
           NP +T    G    QMPLLHG+ DG GS +LQR QLY  PMS+LR+LMICRMAKPEEVLI
Sbjct: 385 NPAVTANMMG---LQMPLLHGMVDGIGSQILQRRQLYTGPMSKLRMLMICRMAKPEEVLI 441

Query: 653 IEDENGNIVRETMKDNDVLVQYKVVHSYL 739
           +EDENGNIVRETMKDNDVLVQYK++   L
Sbjct: 442 VEDENGNIVRETMKDNDVLVQYKIMRETL 470


>ref|XP_002325460.1| predicted protein [Populus trichocarpa] gi|222862335|gb|EEE99841.1|
           predicted protein [Populus trichocarpa]
          Length = 1076

 Score =  123 bits (309), Expect = 5e-26
 Identities = 61/82 (74%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
 Frame = +2

Query: 497 TFGWIHTQMPLLHGVADGFGS-LLQRHQLYATPMSRLRLLMICRMAKPEEVLIIEDENGN 673
           T   +  QMPLLHG+ DG GS +LQR QLYA PMS+LR+LMICRMAKPEEVLI+EDENGN
Sbjct: 384 TVNMMGLQMPLLHGMVDGLGSQILQRRQLYAAPMSKLRMLMICRMAKPEEVLIVEDENGN 443

Query: 674 IVRETMKDNDVLVQYKVVHSYL 739
           IVRETMKDNDVLVQYK++   L
Sbjct: 444 IVRETMKDNDVLVQYKIMRETL 465


>ref|XP_003633992.1| PREDICTED: exportin-1 isoform 3 [Vitis vinifera]
          Length = 1069

 Score =  117 bits (293), Expect = 3e-24
 Identities = 61/89 (68%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
 Frame = +2

Query: 476 NPQITKPTFGWIHTQMPLLHGVADGFGS-LLQRHQLYATPMSRLRLLMICRMAKPEEVLI 652
           NP +     G    Q+PL+ G+ DG GS LLQR QLY+ PMS+LRLLMICRMAKPEEVLI
Sbjct: 380 NPAVAANMMG---LQIPLIPGMVDGLGSQLLQRRQLYSGPMSKLRLLMICRMAKPEEVLI 436

Query: 653 IEDENGNIVRETMKDNDVLVQYKVVHSYL 739
           +EDENGNIVRETMKDNDVLVQYK++   L
Sbjct: 437 VEDENGNIVRETMKDNDVLVQYKIMRETL 465


>ref|XP_003633991.1| PREDICTED: exportin-1 isoform 2 [Vitis vinifera]
          Length = 1061

 Score =  117 bits (293), Expect = 3e-24
 Identities = 61/89 (68%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
 Frame = +2

Query: 476 NPQITKPTFGWIHTQMPLLHGVADGFGS-LLQRHQLYATPMSRLRLLMICRMAKPEEVLI 652
           NP +     G    Q+PL+ G+ DG GS LLQR QLY+ PMS+LRLLMICRMAKPEEVLI
Sbjct: 365 NPAVAANMMG---LQIPLIPGMVDGLGSQLLQRRQLYSGPMSKLRLLMICRMAKPEEVLI 421

Query: 653 IEDENGNIVRETMKDNDVLVQYKVVHSYL 739
           +EDENGNIVRETMKDNDVLVQYK++   L
Sbjct: 422 VEDENGNIVRETMKDNDVLVQYKIMRETL 450


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