BLASTX nr result
ID: Panax21_contig00018686
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00018686 (974 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ... 175 2e-41 ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|2... 168 2e-39 ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycin... 163 7e-38 ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein ... 161 2e-37 ref|XP_002530529.1| RNA binding protein, putative [Ricinus commu... 160 6e-37 >ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera] Length = 133 Score = 175 bits (443), Expect = 2e-41 Identities = 87/103 (84%), Positives = 91/103 (88%) Frame = -2 Query: 760 RGIASKLFVGGLSFYTTENGLSEAFSQYGQVIEAHIVMDRVSDRSKGFGFVTFASEDEAE 581 RGIASKLFVGGLSFYTTE GLSE FSQYGQV+EA IVMDRVSDRSKGFGFVTFASE+EA+ Sbjct: 30 RGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQ 89 Query: 580 KAITEMNGKPLNGRVIFVDRAKPRTGFDGGMPIARGPPEPAGD 452 KA TEM+GK LNGR IFVD AKPR F GGMPIARGPPEP D Sbjct: 90 KARTEMDGKELNGRTIFVDYAKPRADFGGGMPIARGPPEPTAD 132 >ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa] Length = 139 Score = 168 bits (425), Expect = 2e-39 Identities = 91/149 (61%), Positives = 106/149 (71%), Gaps = 5/149 (3%) Frame = -2 Query: 892 MAAFIRRVCSKKT-----TRQLSVSQPNPNFXXXXXXXXXXXXXXXLFRRGIASKLFVGG 728 MAA +RR+ +K+ R V+ P F ++RGI +KLFVGG Sbjct: 1 MAAALRRIAGEKSFMLSSIRAKLVAAPTALFI---------------WQRGITTKLFVGG 45 Query: 727 LSFYTTENGLSEAFSQYGQVIEAHIVMDRVSDRSKGFGFVTFASEDEAEKAITEMNGKPL 548 LS YTTENGLSEAFSQYGQV+EA IVMDR DRSKGFGFVT+ASEDEA+KA+ EMNGK L Sbjct: 46 LSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQKALDEMNGKAL 105 Query: 547 NGRVIFVDRAKPRTGFDGGMPIARGPPEP 461 NGRVI+VD AK +T F GG+PIARGPPEP Sbjct: 106 NGRVIYVDYAKLKTNFGGGIPIARGPPEP 134 >ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max] gi|255631508|gb|ACU16121.1| unknown [Glycine max] Length = 130 Score = 163 bits (412), Expect = 7e-38 Identities = 83/102 (81%), Positives = 86/102 (84%) Frame = -2 Query: 766 FRRGIASKLFVGGLSFYTTENGLSEAFSQYGQVIEAHIVMDRVSDRSKGFGFVTFASEDE 587 FRRGIA KLFVGGLSFYTTEN LSEAFS YGQVIEA IV DRVSDRSKGFGFVTFAS+DE Sbjct: 23 FRRGIAYKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDE 82 Query: 586 AEKAITEMNGKPLNGRVIFVDRAKPRTGFDGGMPIARGPPEP 461 AE AI +M GK LNGRVIFVD AKP G +PIARGPPEP Sbjct: 83 AENAIEDMKGKTLNGRVIFVDYAKPNINTRGEIPIARGPPEP 124 >ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Cucumis sativus] Length = 134 Score = 161 bits (408), Expect = 2e-37 Identities = 80/104 (76%), Positives = 90/104 (86%) Frame = -2 Query: 760 RGIASKLFVGGLSFYTTENGLSEAFSQYGQVIEAHIVMDRVSDRSKGFGFVTFASEDEAE 581 RGIA+KLFVGGLS+YTT+ GLSEAFSQYGQVIEA +VMDRVSD+SKGFGFVTFAS DEA Sbjct: 31 RGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAH 90 Query: 580 KAITEMNGKPLNGRVIFVDRAKPRTGFDGGMPIARGPPEPAGDQ 449 A++EMNGKPLNGRVIFV+ AKP T G +PIARGPPE D+ Sbjct: 91 TALSEMNGKPLNGRVIFVNYAKPTTSSRGAIPIARGPPEEKTDK 134 >ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis] gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis] Length = 127 Score = 160 bits (404), Expect = 6e-37 Identities = 79/101 (78%), Positives = 88/101 (87%) Frame = -2 Query: 760 RGIASKLFVGGLSFYTTENGLSEAFSQYGQVIEAHIVMDRVSDRSKGFGFVTFASEDEAE 581 RGIA+KLFVGGLSFYTT+ GL+EAFSQYGQV+EA IV DRV DRSKGFGFVTFASEDEA Sbjct: 27 RGIATKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASEDEAH 86 Query: 580 KAITEMNGKPLNGRVIFVDRAKPRTGFDGGMPIARGPPEPA 458 A++EMNGK LNGRVI+VD AKPRT +PIARGPPEP+ Sbjct: 87 NALSEMNGKTLNGRVIYVDYAKPRTDSRNEVPIARGPPEPS 127