BLASTX nr result

ID: Panax21_contig00018680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018680
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281067.1| PREDICTED: transmembrane protein 136 [Vitis ...   191   8e-68
gb|AFK46468.1| unknown [Lotus japonicus]                              190   9e-66
ref|XP_002893857.1| hypothetical protein ARALYDRAFT_473659 [Arab...   194   1e-63
ref|NP_174751.2| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain ...   193   6e-62
dbj|BAF00411.1| hypothetical protein [Arabidopsis thaliana]           193   7e-62

>ref|XP_002281067.1| PREDICTED: transmembrane protein 136 [Vitis vinifera]
           gi|302142550|emb|CBI19753.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score =  191 bits (484), Expect(3) = 8e-68
 Identities = 94/128 (73%), Positives = 108/128 (84%), Gaps = 1/128 (0%)
 Frame = -2

Query: 716 QDWNCPVCPLASDSSPPQMKALAVSLAYLIYDLICGLF-DKKIKMDNLIHHLVSIVGFTA 540
           +DW CPVCPLAS SSP QM+ LAV+LAYLIYDLIC L  DK++ +DN IHHLVSIVG  A
Sbjct: 56  EDWRCPVCPLASKSSPKQMQTLAVTLAYLIYDLICCLLEDKRVNLDNSIHHLVSIVGIGA 115

Query: 539 GLAYKKCGSEMVAAICITEISSPFLHLRELLKELGHRDTDLNLAADISFAVIFTVARMIG 360
           GL Y+ CGSEMVA++ ITEISSPFLHLRELLKELG+RDTDLNL  D+ FA+IFT+ARMI 
Sbjct: 116 GLFYEMCGSEMVASLWITEISSPFLHLRELLKELGYRDTDLNLIVDMLFAIIFTIARMIC 175

Query: 359 GPYLTYLT 336
           GP L Y+T
Sbjct: 176 GPCLVYVT 183



 Score = 60.8 bits (146), Expect(3) = 8e-68
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -3

Query: 337 LSADNPFLIKAMALGLQLVSAFWFYKIARMVNY 239
           LSA NP LIKAMALGLQLVSAFWF+KIARMV Y
Sbjct: 184 LSASNPLLIKAMALGLQLVSAFWFFKIARMVKY 216



 Score = 54.3 bits (129), Expect(3) = 8e-68
 Identities = 24/38 (63%), Positives = 27/38 (71%)
 Frame = -3

Query: 880 MEDYTVNLVVFGVISWTTAFLLTRRFLPNRSLDFCNRL 767
           MEDY V LVV GVISW + F++ RR  P RS  FCNRL
Sbjct: 1   MEDYIVKLVVSGVISWASTFMVIRRMFPKRSFGFCNRL 38


>gb|AFK46468.1| unknown [Lotus japonicus]
          Length = 244

 Score =  190 bits (482), Expect(3) = 9e-66
 Identities = 91/127 (71%), Positives = 106/127 (83%)
 Frame = -2

Query: 716 QDWNCPVCPLASDSSPPQMKALAVSLAYLIYDLICGLFDKKIKMDNLIHHLVSIVGFTAG 537
           +DW CP+CP+AS SS P+M+ LAVSL+YLIYDL+C LFD +  MDN IHHLVSIVG  AG
Sbjct: 56  EDWKCPICPVASKSSHPKMQVLAVSLSYLIYDLVCCLFDGRANMDNTIHHLVSIVGIGAG 115

Query: 536 LAYKKCGSEMVAAICITEISSPFLHLRELLKELGHRDTDLNLAADISFAVIFTVARMIGG 357
           L Y+KCGSEMVAA+ +TE+SSPFLHLRELLKELG+RDT LN  ADI FA IFT ARM+ G
Sbjct: 116 LYYQKCGSEMVAALWVTEMSSPFLHLRELLKELGYRDTLLNFTADILFAAIFTFARMMAG 175

Query: 356 PYLTYLT 336
           P LTY+T
Sbjct: 176 PCLTYVT 182



 Score = 54.7 bits (130), Expect(3) = 9e-66
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = -3

Query: 880 MEDYTVNLVVFGVISWTTAFLLTRRFLPNRSLDFCNRL 767
           MEDY   ++V GV+SWTTAF+L RR  P R+ DF NR+
Sbjct: 1   MEDYITKIIVVGVVSWTTAFVLVRRIFPKRTFDFSNRI 38



 Score = 54.3 bits (129), Expect(3) = 9e-66
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -3

Query: 337 LSADNPFLIKAMALGLQLVSAFWFYKIARMVNY 239
           LSA+NPFLIKAM LGLQLVS FWF+KI R++ +
Sbjct: 183 LSANNPFLIKAMGLGLQLVSTFWFFKIVRIMKH 215


>ref|XP_002893857.1| hypothetical protein ARALYDRAFT_473659 [Arabidopsis lyrata subsp.
           lyrata] gi|297339699|gb|EFH70116.1| hypothetical protein
           ARALYDRAFT_473659 [Arabidopsis lyrata subsp. lyrata]
          Length = 231

 Score =  194 bits (493), Expect(3) = 1e-63
 Identities = 90/127 (70%), Positives = 109/127 (85%)
 Frame = -2

Query: 716 QDWNCPVCPLASDSSPPQMKALAVSLAYLIYDLICGLFDKKIKMDNLIHHLVSIVGFTAG 537
           QDW+CPVCP+AS SS  QM+ LA SL+Y+IYDLIC  FD+ I +DN +HH V I+GF AG
Sbjct: 59  QDWSCPVCPIASTSSLRQMETLAFSLSYMIYDLICSHFDQVISIDNAVHHSVCILGFVAG 118

Query: 536 LAYKKCGSEMVAAICITEISSPFLHLRELLKELGHRDTDLNLAADISFAVIFTVARMIGG 357
           L Y+KCGSEMVAA+ ITEISSPFLHLRE+LKE+G+RDTDLNLAAD+ FA IF++ARM+GG
Sbjct: 119 LFYQKCGSEMVAALWITEISSPFLHLREILKEIGYRDTDLNLAADVCFATIFSLARMVGG 178

Query: 356 PYLTYLT 336
           PYL Y+T
Sbjct: 179 PYLVYVT 185



 Score = 59.7 bits (143), Expect(3) = 1e-63
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -3

Query: 337 LSADNPFLIKAMALGLQLVSAFWFYKIARMVNY 239
           +SADNP LIKAMALGLQLVSAFWFYKI +M+ Y
Sbjct: 186 ISADNPILIKAMALGLQLVSAFWFYKILKMMRY 218



 Score = 37.7 bits (86), Expect(3) = 1e-63
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 877 EDY--TVNLVVFGVISWTTAFLLTRRFLPNRSLDFCNRL 767
           E+Y   +N+ + GVISW   F+L RR   N S DF  R+
Sbjct: 3   EEYIRVINITIIGVISWGLIFILIRRIFANYSFDFSTRI 41


>ref|NP_174751.2| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
           [Arabidopsis thaliana] gi|38566650|gb|AAR24215.1|
           At1g35180 [Arabidopsis thaliana]
           gi|51536528|gb|AAU05502.1| At3g16870 [Arabidopsis
           thaliana] gi|332193642|gb|AEE31763.1| TRAM, LAG1 and
           CLN8 (TLC) lipid-sensing domain containing protein
           [Arabidopsis thaliana]
          Length = 231

 Score =  193 bits (491), Expect(3) = 6e-62
 Identities = 89/127 (70%), Positives = 109/127 (85%)
 Frame = -2

Query: 716 QDWNCPVCPLASDSSPPQMKALAVSLAYLIYDLICGLFDKKIKMDNLIHHLVSIVGFTAG 537
           QDW+CPVCP+AS SS  QM+ LA SL+Y+IYDLIC  FD+ + +DN +HH V I+GF AG
Sbjct: 59  QDWSCPVCPIASTSSLRQMETLAFSLSYMIYDLICSHFDQVLSIDNAVHHSVCILGFVAG 118

Query: 536 LAYKKCGSEMVAAICITEISSPFLHLRELLKELGHRDTDLNLAADISFAVIFTVARMIGG 357
           L Y+KCGSEMVAA+ ITEISSPFLHLRE+LKE+G+RDTDLNLAAD+ FA IF++ARM+GG
Sbjct: 119 LFYQKCGSEMVAALWITEISSPFLHLREILKEIGYRDTDLNLAADVCFATIFSLARMVGG 178

Query: 356 PYLTYLT 336
           PYL Y+T
Sbjct: 179 PYLVYVT 185



 Score = 59.7 bits (143), Expect(3) = 6e-62
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -3

Query: 337 LSADNPFLIKAMALGLQLVSAFWFYKIARMVNY 239
           +SADNP LIKAMALGLQLVSAFWFYKI +M+ Y
Sbjct: 186 ISADNPILIKAMALGLQLVSAFWFYKILKMMRY 218



 Score = 33.1 bits (74), Expect(3) = 6e-62
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -3

Query: 877 EDYT--VNLVVFGVISWTTAFLLTRRFLPNRSLDFCNRL 767
           E+Y   +++   GVISW   F+L RR   + S DF  R+
Sbjct: 3   EEYVRVISITTIGVISWGLIFILVRRIFSSYSFDFSTRI 41


>dbj|BAF00411.1| hypothetical protein [Arabidopsis thaliana]
          Length = 231

 Score =  193 bits (491), Expect(3) = 7e-62
 Identities = 89/127 (70%), Positives = 109/127 (85%)
 Frame = -2

Query: 716 QDWNCPVCPLASDSSPPQMKALAVSLAYLIYDLICGLFDKKIKMDNLIHHLVSIVGFTAG 537
           QDW+CPVCP+AS SS  QM+ LA SL+Y+IYDLIC  FD+ + +DN +HH V I+GF AG
Sbjct: 59  QDWSCPVCPIASTSSLRQMETLAFSLSYMIYDLICSHFDQVLSIDNAVHHSVCILGFVAG 118

Query: 536 LAYKKCGSEMVAAICITEISSPFLHLRELLKELGHRDTDLNLAADISFAVIFTVARMIGG 357
           L Y+KCGSEMVAA+ ITEISSPFLHLRE+LKE+G+RDTDLNLAAD+ FA IF++ARM+GG
Sbjct: 119 LFYQKCGSEMVAALWITEISSPFLHLREILKEIGYRDTDLNLAADVCFATIFSLARMVGG 178

Query: 356 PYLTYLT 336
           PYL Y+T
Sbjct: 179 PYLVYVT 185



 Score = 59.7 bits (143), Expect(3) = 7e-62
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -3

Query: 337 LSADNPFLIKAMALGLQLVSAFWFYKIARMVNY 239
           +SADNP LIKAMALGLQLVSAFWFYKI +M+ Y
Sbjct: 186 ISADNPILIKAMALGLQLVSAFWFYKILKMMRY 218



 Score = 32.7 bits (73), Expect(3) = 7e-62
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -3

Query: 877 EDYT--VNLVVFGVISWTTAFLLTRRFLPNRSLDFCNRL 767
           E+Y   +++   GVISW   F+L RR   + S DF  R+
Sbjct: 3   EEYVRVISITTIGVISWGLIFILVRRIFSSYSFDFSTRV 41


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