BLASTX nr result

ID: Panax21_contig00018668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018668
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39173.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002268984.1| PREDICTED: uncharacterized protein LOC100244...   111   5e-23
ref|XP_002530548.1| ubx domain-containing, putative [Ricinus com...    85   7e-15
ref|XP_002309827.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
ref|XP_002880031.1| UBX domain-containing protein [Arabidopsis l...    80   2e-13

>emb|CBI39173.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score =  111 bits (278), Expect = 5e-23
 Identities = 72/158 (45%), Positives = 93/158 (58%), Gaps = 6/158 (3%)
 Frame = +1

Query: 1   EVNSKVDDEVFHAPDNESGSGHAEQ-SSPSKVHESLDPVKTNPDNIADRHKSVSEEVGYP 177
           EV      +V HA  NE  SG  EQ +S +   + L P+  + +N      S + + G P
Sbjct: 199 EVGDATSSKVLHA--NELDSGENEQPTSLNATAKELLPITADHNNSEGCPISPTVKDGCP 256

Query: 178 VPKEN--LIDPRSGAKEATSQVIANEANEAV---HTEIFKDEKDDGLDLSANKSNDVHLN 342
           VP+EN    +P     E +SQ I  E N+AV    TE  +D+K   LD+S NKS DVHLN
Sbjct: 257 VPEENSNFTNPHLEVSEGSSQSIPTEVNQAVVGTKTENVEDQKAGTLDISTNKSTDVHLN 316

Query: 343 IRLPDFTSLQEKFSLTSTLRVVKDYVDEKQDSSIGSYD 456
           IRLP+  SLQEKF +TSTL +VKD+VD+ Q S IGSYD
Sbjct: 317 IRLPNGNSLQEKFPVTSTLSMVKDFVDQNQASGIGSYD 354


>ref|XP_002268984.1| PREDICTED: uncharacterized protein LOC100244691 [Vitis vinifera]
          Length = 543

 Score =  111 bits (278), Expect = 5e-23
 Identities = 72/158 (45%), Positives = 93/158 (58%), Gaps = 6/158 (3%)
 Frame = +1

Query: 1   EVNSKVDDEVFHAPDNESGSGHAEQ-SSPSKVHESLDPVKTNPDNIADRHKSVSEEVGYP 177
           EV      +V HA  NE  SG  EQ +S +   + L P+  + +N      S + + G P
Sbjct: 200 EVGDATSSKVLHA--NELDSGENEQPTSLNATAKELLPITADHNNSEGCPISPTVKDGCP 257

Query: 178 VPKEN--LIDPRSGAKEATSQVIANEANEAV---HTEIFKDEKDDGLDLSANKSNDVHLN 342
           VP+EN    +P     E +SQ I  E N+AV    TE  +D+K   LD+S NKS DVHLN
Sbjct: 258 VPEENSNFTNPHLEVSEGSSQSIPTEVNQAVVGTKTENVEDQKAGTLDISTNKSTDVHLN 317

Query: 343 IRLPDFTSLQEKFSLTSTLRVVKDYVDEKQDSSIGSYD 456
           IRLP+  SLQEKF +TSTL +VKD+VD+ Q S IGSYD
Sbjct: 318 IRLPNGNSLQEKFPVTSTLSMVKDFVDQNQASGIGSYD 355


>ref|XP_002530548.1| ubx domain-containing, putative [Ricinus communis]
           gi|223529910|gb|EEF31839.1| ubx domain-containing,
           putative [Ricinus communis]
          Length = 513

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
 Frame = +1

Query: 34  HAPDNESGSGHAEQSSPSKVHESLDPV---KTNPDNIADRHKSVSEEVGYPVPKENLIDP 204
           H     S S   ++S      ES  P    K +   I DR  S++++ G+P  +E +++ 
Sbjct: 202 HVDKRSSESSKTDKSRSIGTKESTSPTEEAKGSSSMIVDRDNSIADDYGHP-DQEFILNH 260

Query: 205 RSGAKEATSQVIANEANEAVHTEIFKDEKDDGLDLSANKSNDVHLNIRLPDFTSLQEKFS 384
             G  +  SQ+   E NE V  E   D    G +   N  +DVHLNIRLP   SLQ++FS
Sbjct: 261 HPGRGD--SQLATTETNEGVRDEGKADII--GHNERVNAPSDVHLNIRLPSGVSLQDRFS 316

Query: 385 LTSTLRVVKDYVDEKQDSSIGSYD 456
           + S+LR+VKDYVD  Q S IGSYD
Sbjct: 317 VASSLRMVKDYVDRNQASEIGSYD 340


>ref|XP_002309827.1| predicted protein [Populus trichocarpa] gi|222852730|gb|EEE90277.1|
           predicted protein [Populus trichocarpa]
          Length = 520

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 54/123 (43%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
 Frame = +1

Query: 118 TNPDNIADRHKSVSEEVGYPVPKENLIDPRSGAKEATSQVIANEANEAVHTEIFKDEKDD 297
           T+ DNI   H S + E G  + +E  +   +G     S++   E  E        D+K +
Sbjct: 240 TSTDNIIADHTSSAAEDGL-LAQEKSVSNHTGVPTGGSELSTTEIKEV------GDKKAE 292

Query: 298 GLD------LSANK----SNDVHLNIRLPDFTSLQEKFSLTSTLRVVKDYVDEKQDSSIG 447
            +D      L+ NK    S+DVHLNIRLPD  SLQEKFS+TSTLR VKDYVD  Q S IG
Sbjct: 293 SMDDMVPGTLNNNKKVNVSSDVHLNIRLPDGVSLQEKFSVTSTLRTVKDYVDRNQASGIG 352

Query: 448 SYD 456
           +YD
Sbjct: 353 AYD 355


>ref|XP_002880031.1| UBX domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325870|gb|EFH56290.1| UBX domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
 Frame = +1

Query: 64  HAEQSSPSKVHESLDPVKTNPDNIADRHKSVSEEVGYPVPKENLIDPRSGAKEATSQVIA 243
           H    +PS V    +P++       D   SV   V     K  +I+        + + I 
Sbjct: 226 HEATGAPSHVQAEKEPIRPAAPGTNDNASSVRSSVDSKRKKGTVINKDDSGLGVSERDI- 284

Query: 244 NEANEAVHTEIFKDEKDDG----LDLSANKSNDVHLNIRLPDFTSLQEKFSLTSTLRVVK 411
               ++V TE     KD+G    +   + KS+DVHLNIRLPD +SLQEKFS+TS LR+VK
Sbjct: 285 -NLTKSVGTEEVMKPKDEGGEEEVGEKSKKSSDVHLNIRLPDGSSLQEKFSVTSILRMVK 343

Query: 412 DYVDEKQDSSIGSYD 456
           DYV+  Q   +G+YD
Sbjct: 344 DYVNSNQTIGLGAYD 358


Top