BLASTX nr result

ID: Panax21_contig00018643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018643
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258...   137   7e-31
emb|CAN61817.1| hypothetical protein VITISV_015154 [Vitis vinifera]   137   7e-31
gb|AFK76482.1| tRNA ligase [Solanum melongena]                        119   3e-25
gb|ABI34284.1| hypothetical protein SDM1_23t00005 [Solanum demis...   111   5e-23
ref|XP_004170424.1| PREDICTED: uncharacterized LOC101224355, par...   102   2e-20

>ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258617 [Vitis vinifera]
          Length = 1165

 Score =  137 bits (346), Expect = 7e-31
 Identities = 75/132 (56%), Positives = 92/132 (69%), Gaps = 5/132 (3%)
 Frame = -1

Query: 381 ESINNRLNVMNVTENSGQSHASVPPSIRFGSDGTTLHAPVQGHKSIWMPKSYGTVRGATT 202
           E++ NR   + V E+SGQ++    PS++FGS      APVQG ++IW PKS+GTV GA +
Sbjct: 56  EAVTNRFGGLAVDESSGQTYQVPDPSVQFGSVLPADLAPVQGQEAIWKPKSFGTVSGARS 115

Query: 201 VEVGKTPVDQATVTNKGNGAKTASAEKSETVLIKL-----MENFTVDNSTYSLVDIRATF 37
           VEV KTP+D+  V   GNGA+ A AEKS   L KL     + +FTVDNSTYSL  IRATF
Sbjct: 116 VEVEKTPIDKTGVEILGNGAEMAVAEKSCAGLSKLFSSNALADFTVDNSTYSLAQIRATF 175

Query: 36  YPKFENEKSDQE 1
           YPKFENEKSDQE
Sbjct: 176 YPKFENEKSDQE 187


>emb|CAN61817.1| hypothetical protein VITISV_015154 [Vitis vinifera]
          Length = 2186

 Score =  137 bits (346), Expect = 7e-31
 Identities = 75/132 (56%), Positives = 92/132 (69%), Gaps = 5/132 (3%)
 Frame = -1

Query: 381  ESINNRLNVMNVTENSGQSHASVPPSIRFGSDGTTLHAPVQGHKSIWMPKSYGTVRGATT 202
            E++ NR   + V E+SGQ++    PS++FGS      APVQG ++IW PKS+GTV GA +
Sbjct: 943  EAVTNRFGGLAVDESSGQTYQVPDPSVQFGSVLPADLAPVQGQEAIWKPKSFGTVSGARS 1002

Query: 201  VEVGKTPVDQATVTNKGNGAKTASAEKSETVLIKL-----MENFTVDNSTYSLVDIRATF 37
            VEV KTP+D+  V   GNGA+ A AEKS   L KL     + +FTVDNSTYSL  IRATF
Sbjct: 1003 VEVEKTPIDKTGVEILGNGAEMAVAEKSCAGLSKLFSSNALADFTVDNSTYSLAQIRATF 1062

Query: 36   YPKFENEKSDQE 1
            YPKFENEKSDQE
Sbjct: 1063 YPKFENEKSDQE 1074


>gb|AFK76482.1| tRNA ligase [Solanum melongena]
          Length = 1167

 Score =  119 bits (298), Expect = 3e-25
 Identities = 67/127 (52%), Positives = 81/127 (63%)
 Frame = -1

Query: 381 ESINNRLNVMNVTENSGQSHASVPPSIRFGSDGTTLHAPVQGHKSIWMPKSYGTVRGATT 202
           E+I +RL  +++TE+  QS   V  S++FGS G    +PVQ  K IW PKSYGTV GA  
Sbjct: 85  EAITDRLKSVDITESGAQSSVPVT-SLQFGSVGLAPQSPVQHQKVIWKPKSYGTVSGAPV 143

Query: 201 VEVGKTPVDQATVTNKGNGAKTASAEKSETVLIKLMENFTVDNSTYSLVDIRATFYPKFE 22
           VE GKTPV+Q             SA  S+     L+ENFTVDNST+S   +RATFYPKFE
Sbjct: 144 VEAGKTPVEQK------------SALLSKLFKGNLLENFTVDNSTFSRAQVRATFYPKFE 191

Query: 21  NEKSDQE 1
           NEKSDQE
Sbjct: 192 NEKSDQE 198


>gb|ABI34284.1| hypothetical protein SDM1_23t00005 [Solanum demissum]
          Length = 414

 Score =  111 bits (278), Expect = 5e-23
 Identities = 63/127 (49%), Positives = 80/127 (62%)
 Frame = -1

Query: 381 ESINNRLNVMNVTENSGQSHASVPPSIRFGSDGTTLHAPVQGHKSIWMPKSYGTVRGATT 202
           E+I +RL+ +++TE+  QS   V  S++FG+ G    +PVQ  K IW PKSYGTV GA  
Sbjct: 93  EAITDRLSSLDITESGAQSSIPVA-SLQFGNVGLAPQSPVQHQKVIWKPKSYGTVSGAPK 151

Query: 201 VEVGKTPVDQATVTNKGNGAKTASAEKSETVLIKLMENFTVDNSTYSLVDIRATFYPKFE 22
           +E  KTP +Q             S   S+     L+ENFTVDNST+S  +IRATFYPKFE
Sbjct: 152 IEAEKTPNEQK------------STLLSKLFKGSLLENFTVDNSTFSRAEIRATFYPKFE 199

Query: 21  NEKSDQE 1
           NEKSDQE
Sbjct: 200 NEKSDQE 206


>ref|XP_004170424.1| PREDICTED: uncharacterized LOC101224355, partial [Cucumis sativus]
          Length = 240

 Score =  102 bits (255), Expect = 2e-20
 Identities = 60/132 (45%), Positives = 78/132 (59%), Gaps = 5/132 (3%)
 Frame = -1

Query: 381 ESINNRLNVMNVTENSGQSHASVPPSIRFGSDGTTLHA-PVQGHKSIWMPKSYGTVRGAT 205
           E + N L  + VTE S Q H  +  S +FG+   T  A P   H++IW PK+YGT  GA 
Sbjct: 33  EVVTNALGKLRVTE-SDQPHV-LTSSAQFGNAQLTNQATPGLAHRAIWKPKAYGTTSGAA 90

Query: 204 TVEVGKTPVDQATVTNKGNGAKTASAEK----SETVLIKLMENFTVDNSTYSLVDIRATF 37
            +E  K P ++ +  NKG+ A  A+ +     S+      +E FTVDNSTY+   IRATF
Sbjct: 91  VIEGEKAPTNETSTENKGSNAGVAAQDGVVSLSQLFKSNQIEKFTVDNSTYTQAQIRATF 150

Query: 36  YPKFENEKSDQE 1
           YPKFENEKSDQE
Sbjct: 151 YPKFENEKSDQE 162


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