BLASTX nr result

ID: Panax21_contig00018640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018640
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155050.1| PREDICTED: LOW QUALITY PROTEIN: putative pre...   208   4e-52
ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor...   208   4e-52
emb|CBI15151.3| unnamed protein product [Vitis vinifera]              202   2e-50
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...   202   2e-50
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...   195   3e-48

>ref|XP_004155050.1| PREDICTED: LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor
           ATP-dependent RNA helicase DHX16-like, partial [Cucumis
           sativus]
          Length = 1049

 Score =  208 bits (529), Expect = 4e-52
 Identities = 95/136 (69%), Positives = 121/136 (88%)
 Frame = -2

Query: 408 KYRMPDAYDQDGGVNQEKRFSVAVERYRDSSAADKMNPFAEQEAWEDHQIGKATLKFGSK 229
           +YRMP+AYDQ+GGVNQ+KRF+VA++RYRDS AADKMNPFAEQEAWE+HQIGKAT+KFGSK
Sbjct: 286 EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 345

Query: 228 DRKQKSQDYEFVFENQIEFIQDEVMHGENYAEEPHSESLEKYLARTAFEKLQEDRKTLPV 49
           ++KQ S DY+FVFE+QIEFI+  VM G+ + +E  +ESLEK  A++A EKLQE+RKTLP+
Sbjct: 346 NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERQTESLEKSKAQSALEKLQEERKTLPI 405

Query: 48  YPYREELLAAVKEHQV 1
           YPYR++LL AV ++QV
Sbjct: 406 YPYRDQLLQAVNDYQV 421


>ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Cucumis sativus]
          Length = 1055

 Score =  208 bits (529), Expect = 4e-52
 Identities = 95/136 (69%), Positives = 121/136 (88%)
 Frame = -2

Query: 408 KYRMPDAYDQDGGVNQEKRFSVAVERYRDSSAADKMNPFAEQEAWEDHQIGKATLKFGSK 229
           +YRMP+AYDQ+GGVNQ+KRF+VA++RYRDS AADKMNPFAEQEAWE+HQIGKAT+KFGSK
Sbjct: 292 EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 351

Query: 228 DRKQKSQDYEFVFENQIEFIQDEVMHGENYAEEPHSESLEKYLARTAFEKLQEDRKTLPV 49
           ++KQ S DY+FVFE+QIEFI+  VM G+ + +E  +ESLEK  A++A EKLQE+RKTLP+
Sbjct: 352 NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERQTESLEKSKAQSALEKLQEERKTLPI 411

Query: 48  YPYREELLAAVKEHQV 1
           YPYR++LL AV ++QV
Sbjct: 412 YPYRDQLLQAVNDYQV 427


>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score =  202 bits (515), Expect = 2e-50
 Identities = 95/136 (69%), Positives = 116/136 (85%)
 Frame = -2

Query: 408 KYRMPDAYDQDGGVNQEKRFSVAVERYRDSSAADKMNPFAEQEAWEDHQIGKATLKFGSK 229
           +YRMPDAYDQ+GGVNQEKRFSVA++RYRDSSA DKMNPFAEQEAWE+HQIGKATLKFGSK
Sbjct: 298 EYRMPDAYDQEGGVNQEKRFSVALQRYRDSSANDKMNPFAEQEAWEEHQIGKATLKFGSK 357

Query: 228 DRKQKSQDYEFVFENQIEFIQDEVMHGENYAEEPHSESLEKYLARTAFEKLQEDRKTLPV 49
           D+ QKS DY+ VFE+QIEFI+  VM G+ + +   +ES +  +A++  EKLQEDRK LP+
Sbjct: 358 DKNQKSDDYQLVFEDQIEFIKASVMDGDKFEDGLFAESHDDSVAKSELEKLQEDRKMLPI 417

Query: 48  YPYREELLAAVKEHQV 1
           YPYR+ELL AV +HQ+
Sbjct: 418 YPYRDELLKAVDDHQI 433


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score =  202 bits (515), Expect = 2e-50
 Identities = 95/136 (69%), Positives = 116/136 (85%)
 Frame = -2

Query: 408 KYRMPDAYDQDGGVNQEKRFSVAVERYRDSSAADKMNPFAEQEAWEDHQIGKATLKFGSK 229
           +YRMPDAYDQ+GGVNQEKRFSVA++RYRDSSA DKMNPFAEQEAWE+HQIGKATLKFGSK
Sbjct: 298 EYRMPDAYDQEGGVNQEKRFSVALQRYRDSSANDKMNPFAEQEAWEEHQIGKATLKFGSK 357

Query: 228 DRKQKSQDYEFVFENQIEFIQDEVMHGENYAEEPHSESLEKYLARTAFEKLQEDRKTLPV 49
           D+ QKS DY+ VFE+QIEFI+  VM G+ + +   +ES +  +A++  EKLQEDRK LP+
Sbjct: 358 DKNQKSDDYQLVFEDQIEFIKASVMDGDKFEDGLFAESHDDSVAKSELEKLQEDRKMLPI 417

Query: 48  YPYREELLAAVKEHQV 1
           YPYR+ELL AV +HQ+
Sbjct: 418 YPYRDELLKAVDDHQI 433


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score =  195 bits (496), Expect = 3e-48
 Identities = 92/136 (67%), Positives = 115/136 (84%)
 Frame = -2

Query: 408 KYRMPDAYDQDGGVNQEKRFSVAVERYRDSSAADKMNPFAEQEAWEDHQIGKATLKFGSK 229
           +YRMP+AYDQ+GGVNQEKRFSVA++RYRD +A DKMNPFAEQEAWE+HQIGKATLKFGSK
Sbjct: 288 EYRMPEAYDQEGGVNQEKRFSVAMQRYRDLNAEDKMNPFAEQEAWEEHQIGKATLKFGSK 347

Query: 228 DRKQKSQDYEFVFENQIEFIQDEVMHGENYAEEPHSESLEKYLARTAFEKLQEDRKTLPV 49
           ++KQ S DY++VFE+QI+FI+  VM G+ +  E   +S EK  A++AFE LQE+RK LP+
Sbjct: 348 NKKQVSDDYQYVFEDQIDFIKASVMEGDKFDYEEMEDSHEKSKAKSAFEALQEERKKLPM 407

Query: 48  YPYREELLAAVKEHQV 1
           +PYR+ELL AV  HQV
Sbjct: 408 FPYRDELLEAVHNHQV 423


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