BLASTX nr result

ID: Panax21_contig00018639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018639
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycin...   140   2e-31
ref|XP_003612486.1| F-box protein SKIP31 [Medicago truncatula] g...   139   4e-31
gb|AFK43582.1| unknown [Lotus japonicus]                              139   6e-31
ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|2...   138   1e-30
ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycin...   136   3e-30

>ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycine max]
          Length = 324

 Score =  140 bits (354), Expect = 2e-31
 Identities = 78/157 (49%), Positives = 98/157 (62%)
 Frame = -3

Query: 471 MSVSEDEDERLAQFLESEVLSETSEQXXXXXXXXXXXXXXEGPQHKRPRVEDEVYVSEEG 292
           M++S+DEDE LAQFLESEVLSE S++                P+ KR R+E++    ++ 
Sbjct: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEENVEE---------PKAKRARLEEDEITKQKQ 51

Query: 291 NSTRSASSIQVQDPSPSRKIRVVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHI 112
           +S                       S S     + NN   PRRI+TG FS++PPEL+HHI
Sbjct: 52  SSD----------------------SLSAPKNIVVNNGVVPRRIETGYFSQIPPELFHHI 89

Query: 111 LKFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRW 1
           LKFLSSEDLV+CSLVCRFL++AASDEALWRRLYCMRW
Sbjct: 90  LKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRW 126


>ref|XP_003612486.1| F-box protein SKIP31 [Medicago truncatula]
           gi|355513821|gb|AES95444.1| F-box protein SKIP31
           [Medicago truncatula]
          Length = 324

 Score =  139 bits (350), Expect = 4e-31
 Identities = 84/157 (53%), Positives = 95/157 (60%)
 Frame = -3

Query: 471 MSVSEDEDERLAQFLESEVLSETSEQXXXXXXXXXXXXXXEGPQHKRPRVEDEVYVSEEG 292
           M+ S+DEDE LAQFLESEVLSE S++                P+ KR R  DEV      
Sbjct: 1   MTFSDDEDENLAQFLESEVLSEVSDKEEVNVEE---------PKAKRKRT-DEV------ 44

Query: 291 NSTRSASSIQVQDPSPSRKIRVVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHI 112
                       D S    I+   +SS     G NN    PRRI+TG FSKVPPEL+HHI
Sbjct: 45  ------------DSSKQSTIQCSGSSSKPKNYGANNAMV-PRRIETGFFSKVPPELFHHI 91

Query: 111 LKFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRW 1
           LKFLSSEDL++CSLVC FLS AASDEALWRRLYCMRW
Sbjct: 92  LKFLSSEDLISCSLVCSFLSCAASDEALWRRLYCMRW 128


>gb|AFK43582.1| unknown [Lotus japonicus]
          Length = 328

 Score =  139 bits (349), Expect = 6e-31
 Identities = 77/157 (49%), Positives = 99/157 (63%)
 Frame = -3

Query: 471 MSVSEDEDERLAQFLESEVLSETSEQXXXXXXXXXXXXXXEGPQHKRPRVEDEVYVSEEG 292
           M++S+DEDE LAQFLESEVLSE S++                P+ KR R+E E   +++G
Sbjct: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEENLEE---------PKAKRKRIE-EAESTKQG 50

Query: 291 NSTRSASSIQVQDPSPSRKIRVVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHI 112
             T+  S+                  S  +  G+NN    P+RI+TG FSK+PPE +HHI
Sbjct: 51  QGTKQISA----------------PLSEPENYGVNNGVV-PKRIETGFFSKIPPEFFHHI 93

Query: 111 LKFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRW 1
           LKFLSSEDL++CS VC FL++AASDEALWRRLYCMRW
Sbjct: 94  LKFLSSEDLISCSAVCTFLNYAASDEALWRRLYCMRW 130


>ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|222839148|gb|EEE77499.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  138 bits (347), Expect = 1e-30
 Identities = 74/157 (47%), Positives = 96/157 (61%)
 Frame = -3

Query: 471 MSVSEDEDERLAQFLESEVLSETSEQXXXXXXXXXXXXXXEGPQHKRPRVEDEVYVSEEG 292
           M++S++EDE LA+FLESEVLSE S+Q              + P+ KR R ++     +E 
Sbjct: 1   MTISDEEDEILAKFLESEVLSEVSDQDQEEEETEEAKKEEDEPKFKRVRFQETQEEEKEQ 60

Query: 291 NSTRSASSIQVQDPSPSRKIRVVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHI 112
           N  + A++                          NNN+   RRI +G+ SK+PPEL+ HI
Sbjct: 61  NQKKKANN-------------------------NNNNKGEQRRIKSGVLSKIPPELFPHI 95

Query: 111 LKFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRW 1
           LKFLSSEDL+ACSLVCRFL+FAASDE+LWRRLYCMRW
Sbjct: 96  LKFLSSEDLIACSLVCRFLNFAASDESLWRRLYCMRW 132


>ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycine max]
          Length = 325

 Score =  136 bits (343), Expect = 3e-30
 Identities = 80/157 (50%), Positives = 100/157 (63%)
 Frame = -3

Query: 471 MSVSEDEDERLAQFLESEVLSETSEQXXXXXXXXXXXXXXEGPQHKRPRVEDEVYVSEEG 292
           M++S+DEDE LAQFLESEVLSE S++                P+ KR RVE++    ++ 
Sbjct: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEENVEE---------PKAKRKRVEEDEITKQKQ 51

Query: 291 NSTRSASSIQVQDPSPSRKIRVVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHI 112
           +S          D S + K  VVS            N    RRI+TG FS++PPEL++HI
Sbjct: 52  SS----------DSSSAPKNIVVS------------NGVVLRRIETGYFSQIPPELFNHI 89

Query: 111 LKFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRW 1
           LKFLSSEDLV+CSLVCRFL++AASDEALWRRLYCMRW
Sbjct: 90  LKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRW 126


Top