BLASTX nr result
ID: Panax21_contig00018639
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00018639 (638 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycin... 140 2e-31 ref|XP_003612486.1| F-box protein SKIP31 [Medicago truncatula] g... 139 4e-31 gb|AFK43582.1| unknown [Lotus japonicus] 139 6e-31 ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|2... 138 1e-30 ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycin... 136 3e-30 >ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycine max] Length = 324 Score = 140 bits (354), Expect = 2e-31 Identities = 78/157 (49%), Positives = 98/157 (62%) Frame = -3 Query: 471 MSVSEDEDERLAQFLESEVLSETSEQXXXXXXXXXXXXXXEGPQHKRPRVEDEVYVSEEG 292 M++S+DEDE LAQFLESEVLSE S++ P+ KR R+E++ ++ Sbjct: 1 MTLSDDEDENLAQFLESEVLSEVSDKEEENVEE---------PKAKRARLEEDEITKQKQ 51 Query: 291 NSTRSASSIQVQDPSPSRKIRVVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHI 112 +S S S + NN PRRI+TG FS++PPEL+HHI Sbjct: 52 SSD----------------------SLSAPKNIVVNNGVVPRRIETGYFSQIPPELFHHI 89 Query: 111 LKFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRW 1 LKFLSSEDLV+CSLVCRFL++AASDEALWRRLYCMRW Sbjct: 90 LKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRW 126 >ref|XP_003612486.1| F-box protein SKIP31 [Medicago truncatula] gi|355513821|gb|AES95444.1| F-box protein SKIP31 [Medicago truncatula] Length = 324 Score = 139 bits (350), Expect = 4e-31 Identities = 84/157 (53%), Positives = 95/157 (60%) Frame = -3 Query: 471 MSVSEDEDERLAQFLESEVLSETSEQXXXXXXXXXXXXXXEGPQHKRPRVEDEVYVSEEG 292 M+ S+DEDE LAQFLESEVLSE S++ P+ KR R DEV Sbjct: 1 MTFSDDEDENLAQFLESEVLSEVSDKEEVNVEE---------PKAKRKRT-DEV------ 44 Query: 291 NSTRSASSIQVQDPSPSRKIRVVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHI 112 D S I+ +SS G NN PRRI+TG FSKVPPEL+HHI Sbjct: 45 ------------DSSKQSTIQCSGSSSKPKNYGANNAMV-PRRIETGFFSKVPPELFHHI 91 Query: 111 LKFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRW 1 LKFLSSEDL++CSLVC FLS AASDEALWRRLYCMRW Sbjct: 92 LKFLSSEDLISCSLVCSFLSCAASDEALWRRLYCMRW 128 >gb|AFK43582.1| unknown [Lotus japonicus] Length = 328 Score = 139 bits (349), Expect = 6e-31 Identities = 77/157 (49%), Positives = 99/157 (63%) Frame = -3 Query: 471 MSVSEDEDERLAQFLESEVLSETSEQXXXXXXXXXXXXXXEGPQHKRPRVEDEVYVSEEG 292 M++S+DEDE LAQFLESEVLSE S++ P+ KR R+E E +++G Sbjct: 1 MTLSDDEDENLAQFLESEVLSEVSDKEEENLEE---------PKAKRKRIE-EAESTKQG 50 Query: 291 NSTRSASSIQVQDPSPSRKIRVVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHI 112 T+ S+ S + G+NN P+RI+TG FSK+PPE +HHI Sbjct: 51 QGTKQISA----------------PLSEPENYGVNNGVV-PKRIETGFFSKIPPEFFHHI 93 Query: 111 LKFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRW 1 LKFLSSEDL++CS VC FL++AASDEALWRRLYCMRW Sbjct: 94 LKFLSSEDLISCSAVCTFLNYAASDEALWRRLYCMRW 130 >ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|222839148|gb|EEE77499.1| predicted protein [Populus trichocarpa] Length = 330 Score = 138 bits (347), Expect = 1e-30 Identities = 74/157 (47%), Positives = 96/157 (61%) Frame = -3 Query: 471 MSVSEDEDERLAQFLESEVLSETSEQXXXXXXXXXXXXXXEGPQHKRPRVEDEVYVSEEG 292 M++S++EDE LA+FLESEVLSE S+Q + P+ KR R ++ +E Sbjct: 1 MTISDEEDEILAKFLESEVLSEVSDQDQEEEETEEAKKEEDEPKFKRVRFQETQEEEKEQ 60 Query: 291 NSTRSASSIQVQDPSPSRKIRVVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHI 112 N + A++ NNN+ RRI +G+ SK+PPEL+ HI Sbjct: 61 NQKKKANN-------------------------NNNNKGEQRRIKSGVLSKIPPELFPHI 95 Query: 111 LKFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRW 1 LKFLSSEDL+ACSLVCRFL+FAASDE+LWRRLYCMRW Sbjct: 96 LKFLSSEDLIACSLVCRFLNFAASDESLWRRLYCMRW 132 >ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycine max] Length = 325 Score = 136 bits (343), Expect = 3e-30 Identities = 80/157 (50%), Positives = 100/157 (63%) Frame = -3 Query: 471 MSVSEDEDERLAQFLESEVLSETSEQXXXXXXXXXXXXXXEGPQHKRPRVEDEVYVSEEG 292 M++S+DEDE LAQFLESEVLSE S++ P+ KR RVE++ ++ Sbjct: 1 MTLSDDEDENLAQFLESEVLSEVSDKEEENVEE---------PKAKRKRVEEDEITKQKQ 51 Query: 291 NSTRSASSIQVQDPSPSRKIRVVSTSSSCDGGGINNNRENPRRIDTGIFSKVPPELYHHI 112 +S D S + K VVS N RRI+TG FS++PPEL++HI Sbjct: 52 SS----------DSSSAPKNIVVS------------NGVVLRRIETGYFSQIPPELFNHI 89 Query: 111 LKFLSSEDLVACSLVCRFLSFAASDEALWRRLYCMRW 1 LKFLSSEDLV+CSLVCRFL++AASDEALWRRLYCMRW Sbjct: 90 LKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRW 126