BLASTX nr result

ID: Panax21_contig00018624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018624
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320581.1| nucleosome/chromatin assembly factor group [...    86   3e-15
ref|XP_002302832.1| nucleosome/chromatin assembly factor group [...    86   3e-15
ref|XP_002526518.1| retinoblastoma-binding protein, putative [Ri...    84   9e-15
ref|XP_003524806.1| PREDICTED: WD-40 repeat-containing protein M...    84   1e-14
ref|NP_001237595.1| MSI1 [Glycine max] gi|158198571|gb|ABW23439....    84   1e-14

>ref|XP_002320581.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
           gi|222861354|gb|EEE98896.1| nucleosome/chromatin
           assembly factor group [Populus trichocarpa]
          Length = 424

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/67 (62%), Positives = 51/67 (76%)
 Frame = -3

Query: 445 GKDYAVQKVILGTQTSENEPNYLMLAQVKLPSDNFKNGSRHEEDSRSDVGGSGATSPQVN 266
           GKDY+VQK+ILGT TSENEPNYLMLAQV+LP D+ +N +RH +D RSD GG GA + +V 
Sbjct: 58  GKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRSDFGGFGAANGKVQ 117

Query: 265 DI*HYMH 245
            I    H
Sbjct: 118 IIQQINH 124


>ref|XP_002302832.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
           gi|118488022|gb|ABK95832.1| unknown [Populus
           trichocarpa] gi|222844558|gb|EEE82105.1|
           nucleosome/chromatin assembly factor group [Populus
           trichocarpa]
          Length = 424

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/67 (62%), Positives = 51/67 (76%)
 Frame = -3

Query: 445 GKDYAVQKVILGTQTSENEPNYLMLAQVKLPSDNFKNGSRHEEDSRSDVGGSGATSPQVN 266
           GKDY+VQK+ILGT TSENEPNYLMLAQV+LP D+ +N +RH +D RSD GG GA + +V 
Sbjct: 58  GKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRSDFGGFGAANGKVQ 117

Query: 265 DI*HYMH 245
            I    H
Sbjct: 118 IIQQINH 124


>ref|XP_002526518.1| retinoblastoma-binding protein, putative [Ricinus communis]
           gi|223534193|gb|EEF35909.1| retinoblastoma-binding
           protein, putative [Ricinus communis]
          Length = 424

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/66 (62%), Positives = 51/66 (77%)
 Frame = -3

Query: 442 KDYAVQKVILGTQTSENEPNYLMLAQVKLPSDNFKNGSRHEEDSRSDVGGSGATSPQVND 263
           KDY+VQK+ILGT TSENEPNYLMLAQV+LP D+ +N +RH +D RSD+GG GA + +V  
Sbjct: 59  KDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRSDMGGFGAANGKVQI 118

Query: 262 I*HYMH 245
           I    H
Sbjct: 119 IQQINH 124


>ref|XP_003524806.1| PREDICTED: WD-40 repeat-containing protein MSI1-like [Glycine max]
          Length = 425

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/67 (59%), Positives = 50/67 (74%)
 Frame = -3

Query: 445 GKDYAVQKVILGTQTSENEPNYLMLAQVKLPSDNFKNGSRHEEDSRSDVGGSGATSPQVN 266
           GKDY++QKVILGT TSENEPNYLMLAQV+LP D+ +N +RH +D R D+GG G  + +V 
Sbjct: 58  GKDYSLQKVILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRPDIGGFGCANGKVQ 117

Query: 265 DI*HYMH 245
            I    H
Sbjct: 118 IIQQINH 124


>ref|NP_001237595.1| MSI1 [Glycine max] gi|158198571|gb|ABW23439.1| MSI1 [Glycine max]
          Length = 425

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/67 (59%), Positives = 50/67 (74%)
 Frame = -3

Query: 445 GKDYAVQKVILGTQTSENEPNYLMLAQVKLPSDNFKNGSRHEEDSRSDVGGSGATSPQVN 266
           GKDY++QKVILGT TSENEPNYLMLAQV+LP D+ +N +RH +D R D+GG G  + +V 
Sbjct: 58  GKDYSLQKVILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRPDIGGFGCANGKVQ 117

Query: 265 DI*HYMH 245
            I    H
Sbjct: 118 IIQQINH 124


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