BLASTX nr result

ID: Panax21_contig00018615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018615
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309042.1| predicted protein [Populus trichocarpa] gi|1...    60   2e-07
ref|XP_002522055.1| conserved hypothetical protein [Ricinus comm...    57   1e-06
ref|XP_002278904.1| PREDICTED: uncharacterized protein LOC100253...    57   2e-06
ref|NP_001118831.1| uncharacterized protein [Arabidopsis thalian...    55   8e-06

>ref|XP_002309042.1| predicted protein [Populus trichocarpa] gi|118482905|gb|ABK93366.1|
           unknown [Populus trichocarpa]
           gi|222855018|gb|EEE92565.1| predicted protein [Populus
           trichocarpa]
          Length = 201

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
 Frame = -3

Query: 388 GNYFERLTVKPVV----VAKEDDDEKNDVDQKEEKVVNLGGLKELMDSADLGTSRILHRN 221
           GNYFERL  K         K++ +E  D ++ EE+ +   GL+EL+D  D G +RILHR 
Sbjct: 133 GNYFERLLGKTAASTTATPKQEQEENEDEEEGEEEKIGNLGLRELIDGGDSGAARILHRI 192

Query: 220 ISAGSSRF 197
           ISAGS RF
Sbjct: 193 ISAGSPRF 200


>ref|XP_002522055.1| conserved hypothetical protein [Ricinus communis]
           gi|223538654|gb|EEF40255.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 13/76 (17%)
 Frame = -3

Query: 388 GNYFERLTVKPVV--VAK-----------EDDDEKNDVDQKEEKVVNLGGLKELMDSADL 248
           GNYFERL  K +   V+K           E+++E+ +V++KEE+ V   GL+EL+D  + 
Sbjct: 140 GNYFERLQGKAMSGGVSKVDKEEEEEEEEEEEEEEKEVEEKEEQKVGNLGLRELIDGGNS 199

Query: 247 GTSRILHRNISAGSSR 200
           G +R+LHRNI+AGS R
Sbjct: 200 GGARVLHRNINAGSPR 215


>ref|XP_002278904.1| PREDICTED: uncharacterized protein LOC100253357 [Vitis vinifera]
           gi|297741554|emb|CBI32686.3| unnamed protein product
           [Vitis vinifera]
          Length = 192

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/64 (48%), Positives = 44/64 (68%)
 Frame = -3

Query: 388 GNYFERLTVKPVVVAKEDDDEKNDVDQKEEKVVNLGGLKELMDSADLGTSRILHRNISAG 209
           GNYFER+ VK           K   ++K+EKV N+G L+EL++S D G+SRI+HRN+++G
Sbjct: 138 GNYFERVPVKAAA--------KVGGEEKDEKVGNMG-LRELIESGDSGSSRIIHRNMNSG 188

Query: 208 SSRF 197
           S RF
Sbjct: 189 SPRF 192


>ref|NP_001118831.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332645550|gb|AEE79071.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 72

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
 Frame = -3

Query: 388 GNYFERLTVKPVVVAKEDDDEKNDVDQKEEKVVNLGGLKELMDSADLGTSRILHR-NISA 212
           GNYFERL VK       + ++K +V  KEE+V N G L+EL+D  D+   RILHR NI+ 
Sbjct: 5   GNYFERLPVKLPNNRHVEKEKKKEV--KEEEVENWG-LRELIDGGDVAPGRILHRNNINI 61

Query: 211 GSSRFI 194
           GSSRF+
Sbjct: 62  GSSRFV 67


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