BLASTX nr result

ID: Panax21_contig00018613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018613
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318857.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002321863.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_004171333.1| PREDICTED: LOW QUALITY PROTEIN: receptor-lik...   111   7e-23
ref|XP_004148119.1| PREDICTED: receptor-like serine/threonine-pr...   111   7e-23
ref|XP_002510881.1| ATP binding protein, putative [Ricinus commu...   110   2e-22

>ref|XP_002318857.1| predicted protein [Populus trichocarpa] gi|222859530|gb|EEE97077.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/95 (60%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
 Frame = -1

Query: 304 ISPTPTPVTPLYHHNNLIPPIAGGFVAAFSFLIALTLCFRKLTHKRTVPSPDCKPPYRFS 125
           + P P+P+      ++LIPP+A    AAFSFL+   +CFRKLT KRTVP+   KPP+RFS
Sbjct: 10  LPPQPSPLPYHQRSSSLIPPLAAASTAAFSFLLLFVICFRKLTRKRTVPTDFSKPPHRFS 69

Query: 124 YSALRRATSSFSPSHRLGQGGFGSVYRGTL-NSIN 23
           Y+ LRRAT+ FSPS RLGQGGFGSVY GTL N +N
Sbjct: 70  YTTLRRATNKFSPSLRLGQGGFGSVYHGTLPNELN 104


>ref|XP_002321863.1| predicted protein [Populus trichocarpa] gi|222868859|gb|EEF05990.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = -1

Query: 304 ISPTPTPVTPLYHH-NNLIPPIAGGFVAAFSFLIALTLCFRKLTHKRTVPSPDCKPPYRF 128
           + P P P+ P +HH + LI P+A    AAFS L+   +CFRK+T KRTVP+   KPP+ F
Sbjct: 10  LPPQPPPLLPPHHHPSRLIAPLAAATAAAFSVLVLFVICFRKITRKRTVPTDFSKPPHGF 69

Query: 127 SYSALRRATSSFSPSHRLGQGGFGSVYRGTL 35
           SY+ LRRAT++FSPS RLGQGGFGSVY GTL
Sbjct: 70  SYTTLRRATNNFSPSLRLGQGGFGSVYHGTL 100


>ref|XP_004171333.1| PREDICTED: LOW QUALITY PROTEIN: receptor-like
           serine/threonine-protein kinase At4g25390-like [Cucumis
           sativus]
          Length = 681

 Score =  111 bits (277), Expect = 7e-23
 Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
 Frame = -1

Query: 301 SPTPTPVTPLYHHN----NLIPPIAGGFVAAFSFLIALTLCFRKLTHKRTVPSPDCKPPY 134
           SP+P+P +   HH+    +++PPI     AAFS  + L + FRKLT KRT P+ D KPP+
Sbjct: 8   SPSPSPSSLQTHHHPLSSHILPPIVAASTAAFSLFLFLIILFRKLTRKRTAPA-DSKPPH 66

Query: 133 RFSYSALRRATSSFSPSHRLGQGGFGSVYRGTLNSINNHRSVAV 2
           RFSYS LRRAT SFSPS RLGQGGFGSVY GTL     H+ +AV
Sbjct: 67  RFSYSLLRRATESFSPSRRLGQGGFGSVYYGTLP--QTHKEIAV 108


>ref|XP_004148119.1| PREDICTED: receptor-like serine/threonine-protein kinase
           At4g25390-like [Cucumis sativus]
          Length = 682

 Score =  111 bits (277), Expect = 7e-23
 Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
 Frame = -1

Query: 301 SPTPTPVTPLYHHN----NLIPPIAGGFVAAFSFLIALTLCFRKLTHKRTVPSPDCKPPY 134
           SP+P+P +   HH+    +++PPI     AAFS  + L + FRKLT KRT P+ D KPP+
Sbjct: 8   SPSPSPSSLQTHHHPLSSHILPPIVAASTAAFSLFLFLIILFRKLTRKRTAPA-DSKPPH 66

Query: 133 RFSYSALRRATSSFSPSHRLGQGGFGSVYRGTLNSINNHRSVAV 2
           RFSYS LRRAT SFSPS RLGQGGFGSVY GTL     H+ +AV
Sbjct: 67  RFSYSLLRRATDSFSPSRRLGQGGFGSVYYGTLP--QTHKEIAV 108


>ref|XP_002510881.1| ATP binding protein, putative [Ricinus communis]
           gi|223549996|gb|EEF51483.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 655

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 6/93 (6%)
 Frame = -1

Query: 295 TPTPVTPLYHHNN------LIPPIAGGFVAAFSFLIALTLCFRKLTHKRTVPSPDCKPPY 134
           +P P    +HH++      L+PP+     AAFSFL+   +CFRK+T KRTVPS D KPP+
Sbjct: 10  SPQPSFAQFHHHHHPLSSRLLPPLTAA-TAAFSFLLIFAVCFRKITRKRTVPS-DSKPPH 67

Query: 133 RFSYSALRRATSSFSPSHRLGQGGFGSVYRGTL 35
           RFSYSALRRAT+SFS S RLGQGGFGSVYRGTL
Sbjct: 68  RFSYSALRRATNSFSSSLRLGQGGFGSVYRGTL 100


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