BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018608
         (1213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   257   5e-66
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    241   4e-61
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]   197   6e-48
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   191   2e-46
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]   188   2e-45

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  257 bits (656), Expect = 5e-66
 Identities = 117/169 (69%), Positives = 147/169 (86%)
 Frame = +1

Query: 706  KWKLTKGSMVIARGAACCSLYKTHVKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLA 885
            KW+LTKGS+VIA+G A  +LY+T+ ++C  ELNA +D+ S +LWHKR+GHMSEKGLQ+LA
Sbjct: 382  KWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILA 441

Query: 886  KRSLIPSAKGTVLSPCDYCLFGKQHRVSFSSSAKRKSELLERVYSDVCGPIEVESLGGNR 1065
            K+SLI  AKGT + PCDYCLFGKQHRVSF +S++RK  +L+ VYSDVCGP+E+ES+GGN+
Sbjct: 442  KKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNK 501

Query: 1066 YFVTFIDDASRKVWVFLLRTKDQVFQHFQSLHAMVERETGKSLKCLRSD 1212
            YFVTFIDDASRK+WV++L+TKDQVFQ FQ  HA+VERETG+ LK LRSD
Sbjct: 502  YFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSD 550



 Score =  115 bits (289), Expect = 2e-23
 Identities = 68/165 (41%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
 Frame = +3

Query: 30  LHNEETRRKEQGVNFETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETYRC 209
           L NE+ R+K +    +  AL+TE RGRS  R S+                   +     C
Sbjct: 180 LLNEKMRKKPEN---QGQALITEGRGRSYQRSSNN----YGRSGARGKSKNRSKSRVRNC 232

Query: 210 FHCNKEGHYKRNCRIWLDKQKNGEQGKVEEKNTAATV--TEDVVILSFGEEECLHVDDQK 383
           ++CN+ GH+KR+C     K K    G+  + NTAA V   ++VV+    EEEC+H+   +
Sbjct: 233 YNCNQPGHFKRDCPN-PRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPE 291

Query: 384 VDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIG 518
            +WVVDT AS+HATP R+ F  Y AGDFG V+MGNT  SKI GIG
Sbjct: 292 SEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIG 336


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  241 bits (614), Expect = 4e-61
 Identities = 108/169 (63%), Positives = 142/169 (84%)
 Frame = +1

Query: 706  KWKLTKGSMVIARGAACCSLYKTHVKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLA 885
            KW+LTKG++VIA+G A  +LY+T+ ++C  ELNA  +++S +LWHKR+GH SEKGLQ+L+
Sbjct: 383  KWRLTKGALVIAKGVARGTLYRTNAEICQGELNAAHEENSADLWHKRMGHTSEKGLQILS 442

Query: 886  KRSLIPSAKGTVLSPCDYCLFGKQHRVSFSSSAKRKSELLERVYSDVCGPIEVESLGGNR 1065
            K+SLI   KGT + PC+Y LFGKQHRVSF +S++RKS +L+ VYSDVCGP+E+ES+GGN+
Sbjct: 443  KKSLISFTKGTTIKPCNYWLFGKQHRVSFQTSSERKSNILDLVYSDVCGPMEIESMGGNK 502

Query: 1066 YFVTFIDDASRKVWVFLLRTKDQVFQHFQSLHAMVERETGKSLKCLRSD 1212
            YFVTFIDDASRK+WV++ R KDQVFQ FQ  HA+VERETG+  K LR+D
Sbjct: 503  YFVTFIDDASRKLWVYIFRAKDQVFQVFQKFHALVERETGRKRKRLRTD 551



 Score =  114 bits (285), Expect = 5e-23
 Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 3/166 (1%)
 Frame = +3

Query: 30  LHNEETRRKEQGVNFETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETYRC 209
           L NE+ R+K +         +TE+RGRS  R S    +               + +   C
Sbjct: 181 LLNEKMRKKPEN---HGQVFITESRGRSYQRSS----SNYGRSGARGKSKVRSKSKARNC 233

Query: 210 FHCNKEGHYKRNCRIWLDKQKNGEQ-GKVEEKNTAATV--TEDVVILSFGEEECLHVDDQ 380
           ++C++ GH+KR+C     K+  GE  G+  + NTAA V   +DVV+L   EEEC+H+   
Sbjct: 234 YNCDQPGHFKRDCPN--PKRGKGESSGQKNDDNTAAMVQNNDDVVLLINEEEECMHLAGT 291

Query: 381 KVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIG 518
           + +WVVDT ASYHATP R+ F  Y AGD+G V+MGNT  SKI GIG
Sbjct: 292 ESEWVVDTAASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIAGIG 337


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score =  197 bits (500), Expect = 6e-48
 Identities = 94/170 (55%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
 Frame = +1

Query: 706  KWKLTKGSMVIARGAACCSLYKTHVKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLA 885
            +WKLT+GSMVIA+G    SLY    ++  S +NAV+DDS+  LWH RLGHMSEKGL +LA
Sbjct: 262  QWKLTRGSMVIAKGNKSSSLYLMQTRVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILA 321

Query: 886  KRSLIPSAKGTVLSPCDYCLFGKQHRVSFSSSA-KRKSELLERVYSDVCGPIEVESLGGN 1062
            K++L+   K   L  C +CL GKQ RV+F +    RK  +L+ VYSDVCGP++ ++LGG+
Sbjct: 322  KKNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRYTRKPGMLDLVYSDVCGPMKTKTLGGS 381

Query: 1063 RYFVTFIDDASRKVWVFLLRTKDQVFQHFQSLHAMVERETGKSLKCLRSD 1212
             YFVTFIDD SRK+WV+ L+TKDQV   F+  HA+VER++G+ LKC+R+D
Sbjct: 382  LYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTD 431



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 58/171 (33%), Positives = 80/171 (46%)
 Frame = +3

Query: 3   MTMQMVKDSLHNEETRRKEQGVNFETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXX 182
           M M +VK  + NEE RRK QG + ++  LV E RGRS  RG    D              
Sbjct: 75  MNMDLVKSCVLNEEMRRKSQGSSSQSSVLVIEKRGRSKSRGPKNRD---------RSKNK 125

Query: 183 XXQGETYRCFHCNKEGHYKRNCRIWLDKQKNGEQGKVEEKNTAATVTEDVVILSFGEEEC 362
             +     C +C+ +GH K+ CR     +++ +QGKV+EK       +D V  +    + 
Sbjct: 126 TNKFANVECHYCHLKGHIKKYCR---QLKRDMKQGKVKEKKNDNGGEDDQVATT--TSDF 180

Query: 363 LHVDDQKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGI 515
             V D  VD                FFT+Y +GDFG VRMGN D +K IG+
Sbjct: 181 FIVYDSDVD----------------FFTSYTSGDFGSVRMGNDDSAKAIGM 215


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  191 bits (486), Expect = 2e-46
 Identities = 92/170 (54%), Positives = 125/170 (73%), Gaps = 1/170 (0%)
 Frame = +1

Query: 706  KWKLTKGSMVIARGAACCSLYKTHVKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLA 885
            +WKLT+GSMVIA+G    SLY    ++  S +NAV+DDS+  LWH +LGHMSEKGL +LA
Sbjct: 359  QWKLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNKLGHMSEKGLMILA 418

Query: 886  KRSLIPSAKGTVLSPCDYCLFGKQHRVSFSS-SAKRKSELLERVYSDVCGPIEVESLGGN 1062
            K++L+   K   L  C +CL GKQ RV+F +    RK  +L+ VYSDV GP++ ++LGG+
Sbjct: 419  KKNLLXGMKKGSLKRCAHCLAGKQTRVAFKTLHHTRKPGMLDLVYSDVYGPMKTKTLGGS 478

Query: 1063 RYFVTFIDDASRKVWVFLLRTKDQVFQHFQSLHAMVERETGKSLKCLRSD 1212
             YFVTFIDD SRK+WV+ L+TKDQV   F+  HA+VER++G+ LKC+R+D
Sbjct: 479  LYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTD 528



 Score =  109 bits (273), Expect = 1e-21
 Identities = 65/180 (36%), Positives = 95/180 (52%), Gaps = 8/180 (4%)
 Frame = +3

Query: 3   MTMQMVKDSLHNEETRRKEQGVNFETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXX 182
           M M +VK  + NEE RRK QG + +++ LV    GRS  RG    D              
Sbjct: 148 MNMDLVKSCVLNEEMRRKSQGSSSQSNVLVIXKXGRSKSRGPKNRDRSKSKTNKFA---- 203

Query: 183 XXQGETYRCFHCNKEGHYKRNCRIWLDKQKNGEQGKVEEKNT--------AATVTEDVVI 338
                   C +C+ +GH K+ CR     +++ +QGKV+EK           AT   D +I
Sbjct: 204 -----NVECHYCHLKGHIKKYCR---QLKRDMKQGKVKEKKNDNGGEDDQVATTISDFLI 255

Query: 339 LSFGEEECLHVDDQKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIG 518
           +   + + ++   Q+  WV+D GAS HATP+++FFT+Y +GDFG VRMGN   +K IG+G
Sbjct: 256 VY--DSDVVNFACQESXWVIDXGASIHATPQKDFFTSYTSGDFGSVRMGNDGSAKAIGMG 313


>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
          Length = 1204

 Score =  188 bits (478), Expect = 2e-45
 Identities = 91/170 (53%), Positives = 122/170 (71%), Gaps = 1/170 (0%)
 Frame = +1

Query: 706  KWKLTKGSMVIARGAACCSLYKTHVKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLA 885
            +W LT+GSMVIA+G    SLY    ++  S +NAV+DDS+  LWH RLGHMSEKGL +LA
Sbjct: 331  QWNLTRGSMVIAKGNKSSSLYLMQARVIDSNINAVDDDSTFELWHNRLGHMSEKGLMILA 390

Query: 886  KRSLIPSAKGTVLSPCDYCLFGKQHRVSFSS-SAKRKSELLERVYSDVCGPIEVESLGGN 1062
            K++L+   K   L  C +CL GKQ RV+F +    RK  +L+ VYSDVCGP++ ++L  +
Sbjct: 391  KKNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLHHTRKPGMLDLVYSDVCGPMKTKTLSES 450

Query: 1063 RYFVTFIDDASRKVWVFLLRTKDQVFQHFQSLHAMVERETGKSLKCLRSD 1212
             YFVTFIDD SRK+WV+ L+TKDQV   F+  HA+VER++G+ LKC+R D
Sbjct: 451  LYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRID 500



 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
 Frame = +3

Query: 39  EETRRKEQGVNFETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETYRCFHC 218
           +E RRK QG + +++ LVTE RGRS  +G    D                      C +C
Sbjct: 145 DEMRRKSQGSSSQSNVLVTEKRGRSKSKGPKNRDRSKSKTNKFA---------NVECHYC 195

Query: 219 NKEGHYKRNCRIWLDKQKNGEQGKVEEKNT--------AATVTEDVVILSFGEEECLHVD 374
           + +GH K+ C      +++ +QGKV+EK           AT T D +I+   + + ++  
Sbjct: 196 HLKGHIKKYCH---QLKRDMKQGKVKEKKNDNGGEDDQVATTTSDFLIVY--DSDVVNFA 250

Query: 375 DQKVDWVVDTGASYHATPKREFFTTY---KAGDFGYVRM 482
             +  WV+D+GAS HAT +++FFT+Y   KA   G VR+
Sbjct: 251 CXETSWVIDSGASIHATLRKDFFTSYTSAKAIGMGDVRL 289