BLASTX nr result

ID: Panax21_contig00018603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018603
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synt...    77   2e-12
ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt...    77   2e-12
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...    74   2e-11
emb|CBI34194.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...    70   2e-10

>ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine
           max]
          Length = 687

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 36/46 (78%), Positives = 44/46 (95%)
 Frame = -2

Query: 471 AGSNVQEAQKAIRMSFTLPSSCYATMAIRELLKTSTSVAYHKTLNQ 334
           +GS+ Q++Q A+++SFTLP+SCYATMAIRELLKTSTSVAYHKTLNQ
Sbjct: 642 SGSSSQDSQIALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLNQ 687


>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine
           max]
          Length = 687

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/45 (80%), Positives = 43/45 (95%)
 Frame = -2

Query: 468 GSNVQEAQKAIRMSFTLPSSCYATMAIRELLKTSTSVAYHKTLNQ 334
           GS+ Q++Q A+++SFTLP+SCYATMAIRELLKTSTSVAYHKTLNQ
Sbjct: 643 GSSSQDSQIALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLNQ 687


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
           gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
           d, putative [Ricinus communis]
          Length = 753

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/45 (75%), Positives = 41/45 (91%)
 Frame = -2

Query: 468 GSNVQEAQKAIRMSFTLPSSCYATMAIRELLKTSTSVAYHKTLNQ 334
           G N + AQ A++++FTLP+SCYATMAIRELLKTSTSVA+HKTLNQ
Sbjct: 709 GPNTRGAQTALKLTFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 753


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -2

Query: 465 SNVQEAQKAIRMSFTLPSSCYATMAIRELLKTSTSVAYHKTLN 337
           S   EAQ+A+++SFTLP+SCYATMAIRELLKTSTSVA+ KTLN
Sbjct: 648 SGAPEAQRALKLSFTLPASCYATMAIRELLKTSTSVAFQKTLN 690


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
           vinifera]
          Length = 694

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -2

Query: 465 SNVQEAQKAIRMSFTLPSSCYATMAIRELLKTSTSVAYHKTLN 337
           S   EAQ+A+++SFTLP+SCYATMAIRELLKTSTSVA+ KTLN
Sbjct: 649 SGAPEAQRALKLSFTLPASCYATMAIRELLKTSTSVAFQKTLN 691


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