BLASTX nr result

ID: Panax21_contig00018594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018594
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542494.1| PREDICTED: zinc finger CCCH domain-containin...    74   1e-26
ref|XP_003537244.1| PREDICTED: zinc finger CCCH domain-containin...    74   1e-26
ref|XP_002326328.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-26
emb|CBI31527.3| unnamed protein product [Vitis vinifera]               74   4e-26
ref|XP_003520639.1| PREDICTED: zinc finger CCCH domain-containin...    72   4e-26

>ref|XP_003542494.1| PREDICTED: zinc finger CCCH domain-containing protein 11-like
           [Glycine max]
          Length = 361

 Score = 73.9 bits (180), Expect(3) = 1e-26
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +3

Query: 48  KFYKVGQCAKGFKCKFSHDLNV*RKGEKIDIYSDKGNE 161
           +FYKVGQCAKGFKCKFSHDLNV RKGEKIDIYSDK ++
Sbjct: 95  EFYKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDQ 132



 Score = 57.8 bits (138), Expect(3) = 1e-26
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +1

Query: 274 KEKEPMEDWD*ETLEKVVESKGNEYNQNKPTDI 372
           +++E MEDWD ETLEKVVESK  EYNQNKPTDI
Sbjct: 130 RDQETMEDWDQETLEKVVESKKTEYNQNKPTDI 162



 Score = 33.9 bits (76), Expect(3) = 1e-26
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   QPKVPVGVDLKSILCE 49
           QPKVPVGVD KSILCE
Sbjct: 80  QPKVPVGVDPKSILCE 95


>ref|XP_003537244.1| PREDICTED: zinc finger CCCH domain-containing protein 11-like
           [Glycine max]
          Length = 362

 Score = 73.6 bits (179), Expect(3) = 1e-26
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +3

Query: 48  KFYKVGQCAKGFKCKFSHDLNV*RKGEKIDIYSDKGNE 161
           +F+KVGQCAKGFKCKFSHDLNV RKGEKIDIYSDK +E
Sbjct: 96  EFFKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDE 133



 Score = 57.8 bits (138), Expect(3) = 1e-26
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +1

Query: 274 KEKEPMEDWD*ETLEKVVESKGNEYNQNKPTDI 372
           +++E MEDWD ETLEKVVESK  EYNQNKPTDI
Sbjct: 131 RDEETMEDWDQETLEKVVESKKTEYNQNKPTDI 163



 Score = 33.9 bits (76), Expect(3) = 1e-26
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   QPKVPVGVDLKSILCE 49
           QPKVPVGVD KSILCE
Sbjct: 81  QPKVPVGVDPKSILCE 96


>ref|XP_002326328.1| predicted protein [Populus trichocarpa] gi|222833521|gb|EEE71998.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 72.4 bits (176), Expect(3) = 2e-26
 Identities = 32/38 (84%), Positives = 36/38 (94%)
 Frame = +3

Query: 48  KFYKVGQCAKGFKCKFSHDLNV*RKGEKIDIYSDKGNE 161
           +F+KVGQCAKGFKCKFSHDLNV RKGEKIDIYSDK ++
Sbjct: 95  EFFKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDQ 132



 Score = 58.5 bits (140), Expect(3) = 2e-26
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +1

Query: 274 KEKEPMEDWD*ETLEKVVESKGNEYNQNKPTDI 372
           +++E MEDWD ETLEKVVESKG EY QNKPTDI
Sbjct: 130 RDQETMEDWDQETLEKVVESKGKEYQQNKPTDI 162



 Score = 33.9 bits (76), Expect(3) = 2e-26
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   QPKVPVGVDLKSILCE 49
           QPKVPVGVD KSILCE
Sbjct: 80  QPKVPVGVDPKSILCE 95


>emb|CBI31527.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 73.6 bits (179), Expect(3) = 4e-26
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +3

Query: 48  KFYKVGQCAKGFKCKFSHDLNV*RKGEKIDIYSDKGNE 161
           +FYKVGQCAKGFKCKFSHDLNV RKGEKIDIYSD+ +E
Sbjct: 95  EFYKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDQRDE 132



 Score = 56.2 bits (134), Expect(3) = 4e-26
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +1

Query: 274 KEKEPMEDWD*ETLEKVVESKGNEYNQNKPTDI 372
           +++E MEDWD ETLEKVVESK  EYNQNKPT+I
Sbjct: 130 RDEETMEDWDQETLEKVVESKKKEYNQNKPTEI 162



 Score = 33.9 bits (76), Expect(3) = 4e-26
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   QPKVPVGVDLKSILCE 49
           QPKVPVGVD KSILCE
Sbjct: 80  QPKVPVGVDPKSILCE 95


>ref|XP_003520639.1| PREDICTED: zinc finger CCCH domain-containing protein 11-like
           [Glycine max]
          Length = 356

 Score = 72.0 bits (175), Expect(3) = 4e-26
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +3

Query: 48  KFYKVGQCAKGFKCKFSHDLNV*RKGEKIDIYSDKGNE 161
           +F+KVGQC KGFKCKFSHDLNV RKGEKIDIYSDK +E
Sbjct: 95  EFFKVGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDE 132



 Score = 57.8 bits (138), Expect(3) = 4e-26
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +1

Query: 274 KEKEPMEDWD*ETLEKVVESKGNEYNQNKPTDI 372
           +++E MEDWD ETLEKVVESK  EYNQNKPTDI
Sbjct: 130 RDEETMEDWDQETLEKVVESKKTEYNQNKPTDI 162



 Score = 33.9 bits (76), Expect(3) = 4e-26
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   QPKVPVGVDLKSILCE 49
           QPKVPVGVD KSILCE
Sbjct: 80  QPKVPVGVDPKSILCE 95


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