BLASTX nr result
ID: Panax21_contig00018584
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00018584
(847 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280841.1| PREDICTED: WD repeat-containing protein 20-l... 209 4e-95
emb|CBI32723.3| unnamed protein product [Vitis vinifera] 209 4e-95
ref|XP_003521386.1| PREDICTED: WD repeat-containing protein 20-l... 209 1e-94
ref|XP_003554372.1| PREDICTED: WD repeat-containing protein 20-l... 206 6e-94
ref|XP_002326176.1| predicted protein [Populus trichocarpa] gi|2... 200 7e-92
>ref|XP_002280841.1| PREDICTED: WD repeat-containing protein 20-like [Vitis vinifera]
Length = 554
Score = 209 bits (532), Expect(2) = 4e-95
Identities = 116/190 (61%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Frame = -3
Query: 845 SSANNNKPQSPAGTLKTYFKTPEGRYKLQYEKTHPAGLLHYAHGKTLTQVTLAHLKDKP- 669
SS+ N QSP LKTYFKTPEGRYKL YEKTHPAGLLHY HGKT+TQVTLAHLKDKP
Sbjct: 13 SSSATNNAQSPG--LKTYFKTPEGRYKLHYEKTHPAGLLHYGHGKTVTQVTLAHLKDKPV 70
Query: 668 TLXXXXXXXXXXXXXXXXXXXXRFLSTGNGSRALXXXXXXXXXXXXXGANRIXXXXXXXX 489
+ RFL NGSRAL G RI
Sbjct: 71 SASPPAPPSSYSTGGGVRSAAARFLGGSNGSRALSFVGGNGGSKSVSGNGRIGSIGVSSL 130
Query: 488 XXXXXXXNFDGKGTYLIFNVGDAVFISDLNSQDKDPIKSIHFSTSNPICHAFDADAKDGH 309
NFDGKGTYLIFNVGDA+FI DLN+QDKDPIKSIHFS SNP+CHAFD DAKDGH
Sbjct: 131 SNPTGTSNFDGKGTYLIFNVGDAIFICDLNTQDKDPIKSIHFSNSNPVCHAFDPDAKDGH 190
Query: 308 DLLIGLASGD 279
DLLIGL SGD
Sbjct: 191 DLLIGLNSGD 200
Score = 166 bits (419), Expect(2) = 4e-95
Identities = 76/93 (81%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 RCSSISWMPSGDGTFVVTHADGNLYVYEKSKDGSSDPSFPAIKDQTQFSVAHARYSK-NP 100
RC+SI+W+P GDG FVV HADGNLYVYEKSK+G+ D SFP IKDQTQFSVAHARYSK NP
Sbjct: 233 RCTSIAWVPDGDGAFVVAHADGNLYVYEKSKEGAGDSSFPVIKDQTQFSVAHARYSKSNP 292
Query: 99 IARWHICQGSVNSIAFSTDGAYIATVGRDGYLR 1
IARWHIC GS+N + FSTDGAYIATVGRDGYLR
Sbjct: 293 IARWHICPGSINGVTFSTDGAYIATVGRDGYLR 325
>emb|CBI32723.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 209 bits (532), Expect(2) = 4e-95
Identities = 116/190 (61%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Frame = -3
Query: 845 SSANNNKPQSPAGTLKTYFKTPEGRYKLQYEKTHPAGLLHYAHGKTLTQVTLAHLKDKP- 669
SS+ N QSP LKTYFKTPEGRYKL YEKTHPAGLLHY HGKT+TQVTLAHLKDKP
Sbjct: 13 SSSATNNAQSPG--LKTYFKTPEGRYKLHYEKTHPAGLLHYGHGKTVTQVTLAHLKDKPV 70
Query: 668 TLXXXXXXXXXXXXXXXXXXXXRFLSTGNGSRALXXXXXXXXXXXXXGANRIXXXXXXXX 489
+ RFL NGSRAL G RI
Sbjct: 71 SASPPAPPSSYSTGGGVRSAAARFLGGSNGSRALSFVGGNGGSKSVSGNGRIGSIGVSSL 130
Query: 488 XXXXXXXNFDGKGTYLIFNVGDAVFISDLNSQDKDPIKSIHFSTSNPICHAFDADAKDGH 309
NFDGKGTYLIFNVGDA+FI DLN+QDKDPIKSIHFS SNP+CHAFD DAKDGH
Sbjct: 131 SNPTGTSNFDGKGTYLIFNVGDAIFICDLNTQDKDPIKSIHFSNSNPVCHAFDPDAKDGH 190
Query: 308 DLLIGLASGD 279
DLLIGL SGD
Sbjct: 191 DLLIGLNSGD 200
Score = 166 bits (419), Expect(2) = 4e-95
Identities = 76/93 (81%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 RCSSISWMPSGDGTFVVTHADGNLYVYEKSKDGSSDPSFPAIKDQTQFSVAHARYSK-NP 100
RC+SI+W+P GDG FVV HADGNLYVYEKSK+G+ D SFP IKDQTQFSVAHARYSK NP
Sbjct: 233 RCTSIAWVPDGDGAFVVAHADGNLYVYEKSKEGAGDSSFPVIKDQTQFSVAHARYSKSNP 292
Query: 99 IARWHICQGSVNSIAFSTDGAYIATVGRDGYLR 1
IARWHIC GS+N + FSTDGAYIATVGRDGYLR
Sbjct: 293 IARWHICPGSINGVTFSTDGAYIATVGRDGYLR 325
>ref|XP_003521386.1| PREDICTED: WD repeat-containing protein 20-like [Glycine max]
Length = 550
Score = 209 bits (531), Expect(2) = 1e-94
Identities = 116/191 (60%), Positives = 123/191 (64%), Gaps = 2/191 (1%)
Frame = -3
Query: 845 SSANNNKPQSPAGTLKTYFKTPEGRYKLQYEKTHPAGLLHYAHGKTLTQVTLAHLKDKP- 669
SS++ QSP LKTYFKTPEGRYKLQYEKTHP+GLLHYAHGKT+TQVTLAHLKDKP
Sbjct: 13 SSSSGTAAQSPG--LKTYFKTPEGRYKLQYEKTHPSGLLHYAHGKTVTQVTLAHLKDKPA 70
Query: 668 -TLXXXXXXXXXXXXXXXXXXXXRFLSTGNGSRALXXXXXXXXXXXXXGANRIXXXXXXX 492
+ R L NGSRAL G RI
Sbjct: 71 PSTPTASSSSSFSASSGVRSAAARLLGGSNGSRALSFVGGNGGSKSNGGNTRISSIGASS 130
Query: 491 XXXXXXXXNFDGKGTYLIFNVGDAVFISDLNSQDKDPIKSIHFSTSNPICHAFDADAKDG 312
NFDGKGTYLIFNVGDA+FISDLNSQDKDPIKSIHFS SNP+CH FD DAKDG
Sbjct: 131 TSSAMANPNFDGKGTYLIFNVGDAIFISDLNSQDKDPIKSIHFSNSNPVCHTFDQDAKDG 190
Query: 311 HDLLIGLASGD 279
HDLLIGL SGD
Sbjct: 191 HDLLIGLNSGD 201
Score = 164 bits (416), Expect(2) = 1e-94
Identities = 74/93 (79%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 RCSSISWMPSGDGTFVVTHADGNLYVYEKSKDGSSDPSFPAIKDQTQFSVAHARYSK-NP 100
RC+ I+W+P GDG+FVV+H DGNLYVYEK+KDG+ D SFP +KDQTQFSVAHARYSK NP
Sbjct: 234 RCTCIAWVPGGDGSFVVSHTDGNLYVYEKNKDGAGDSSFPVVKDQTQFSVAHARYSKSNP 293
Query: 99 IARWHICQGSVNSIAFSTDGAYIATVGRDGYLR 1
IARWHICQGS+NSI+FS DGAY+ATVGRDGYLR
Sbjct: 294 IARWHICQGSINSISFSMDGAYLATVGRDGYLR 326
>ref|XP_003554372.1| PREDICTED: WD repeat-containing protein 20-like [Glycine max]
Length = 550
Score = 206 bits (525), Expect(2) = 6e-94
Identities = 116/191 (60%), Positives = 123/191 (64%), Gaps = 3/191 (1%)
Frame = -3
Query: 842 SANNNKPQSPAGTLKTYFKTPEGRYKLQYEKTHPAGLLHYAHGKTLTQVTLAHLKDKP-- 669
S+++ QSP LKTYFKTPEGRYKL YEKTHP+GLLHYAHGKT+TQVTLAHLKDKP
Sbjct: 13 SSSSVTAQSPG--LKTYFKTPEGRYKLHYEKTHPSGLLHYAHGKTVTQVTLAHLKDKPAP 70
Query: 668 -TLXXXXXXXXXXXXXXXXXXXXRFLSTGNGSRALXXXXXXXXXXXXXGANRIXXXXXXX 492
T R L NGSRAL G RI
Sbjct: 71 STPTASSSSSSFSASSGVRSAAARLLGGSNGSRALSFVGGNGGSKSNGGNTRIGSIGASS 130
Query: 491 XXXXXXXXNFDGKGTYLIFNVGDAVFISDLNSQDKDPIKSIHFSTSNPICHAFDADAKDG 312
NFDGKGTYLIFNVGDA+FISDLNSQDKDPIKSIHFS SNP+CHAFD DAKDG
Sbjct: 131 TSSAMANPNFDGKGTYLIFNVGDAIFISDLNSQDKDPIKSIHFSNSNPVCHAFDQDAKDG 190
Query: 311 HDLLIGLASGD 279
HDLLIGL SGD
Sbjct: 191 HDLLIGLNSGD 201
Score = 164 bits (416), Expect(2) = 6e-94
Identities = 74/93 (79%), Positives = 86/93 (92%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 RCSSISWMPSGDGTFVVTHADGNLYVYEKSKDGSSDPSFPAIKDQTQFSVAHARYSK-NP 100
RC+ I+W+P GDG+FVV+HADGNLYVYEK+KDG+ D SFP +KDQTQFSVAHARYSK NP
Sbjct: 234 RCTCIAWVPGGDGSFVVSHADGNLYVYEKNKDGAGDSSFPVVKDQTQFSVAHARYSKSNP 293
Query: 99 IARWHICQGSVNSIAFSTDGAYIATVGRDGYLR 1
IARWHICQGS+NSI+FS DGA++ATVGRDGYLR
Sbjct: 294 IARWHICQGSINSISFSMDGAFLATVGRDGYLR 326
>ref|XP_002326176.1| predicted protein [Populus trichocarpa] gi|222833369|gb|EEE71846.1|
predicted protein [Populus trichocarpa]
Length = 548
Score = 200 bits (508), Expect(2) = 7e-92
Identities = 111/191 (58%), Positives = 122/191 (63%), Gaps = 2/191 (1%)
Frame = -3
Query: 845 SSANNNKPQSPAGTLKTYFKTPEGRYKLQYEKTHPAGLLHYAHGKTLTQVTLAHLKDKPT 666
+S+ + PQSP LKTYFKTPEGRYKL YEKTHP+GLLHYAHGKT TQVTLA+LKDKP
Sbjct: 11 TSSTSANPQSPG--LKTYFKTPEGRYKLHYEKTHPSGLLHYAHGKTATQVTLANLKDKPA 68
Query: 665 LXXXXXXXXXXXXXXXXXXXXRFLSTG-NGSRALXXXXXXXXXXXXXGAN-RIXXXXXXX 492
L G NGSRAL ++ RI
Sbjct: 69 PSTPTAPPSSFSASSGVRSAAARLLGGSNGSRALSFVGGNGGSKSISSSSSRIGSLGASS 128
Query: 491 XXXXXXXXNFDGKGTYLIFNVGDAVFISDLNSQDKDPIKSIHFSTSNPICHAFDADAKDG 312
NFDGKGTYLIFNVGDA+FISDLNS DKDPIKSIHFS SNP+CHAFD DAKDG
Sbjct: 129 SSNSMINTNFDGKGTYLIFNVGDAIFISDLNSPDKDPIKSIHFSNSNPVCHAFDQDAKDG 188
Query: 311 HDLLIGLASGD 279
HD L+GL+SGD
Sbjct: 189 HDFLVGLSSGD 199
Score = 164 bits (415), Expect(2) = 7e-92
Identities = 77/98 (78%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
Frame = -2
Query: 291 SFWRCRCSSISWMPSGDGTFVVTHADGNLYVYEKSKDGSSDPSFPAIKDQTQFSVAHARY 112
S R RC SI+W+P GDG FVV HADGNLYVYEKSKDG+ D SFP IKDQTQFSV+HARY
Sbjct: 227 SLKRHRCMSIAWVPGGDGAFVVAHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVSHARY 286
Query: 111 SK-NPIARWHICQGSVNSIAFSTDGAYIATVGRDGYLR 1
SK NPIARWH+ QGS+N IAFSTDG Y+ATVGRDGYLR
Sbjct: 287 SKSNPIARWHVSQGSINGIAFSTDGTYLATVGRDGYLR 324