BLASTX nr result

ID: Panax21_contig00018583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018583
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...   123   2e-26
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...   119   3e-25
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...   118   7e-25
ref|XP_002300861.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14

>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  128 bits (322), Expect = 5e-28
 Identities = 72/167 (43%), Positives = 102/167 (61%), Gaps = 7/167 (4%)
 Frame = -1

Query: 480 IEIQGFFRLEPIGAVDSDLINDLGLINVESLGDLEVILYYRFPYWEIRCPIQGLHEFGIF 301
           +++QG F LE +   D+ +I +L L N+ESLG +EV +            +Q L E GIF
Sbjct: 224 VQVQGLFNLEMMREFDAKMIYNLHLFNIESLGSIEVEMINSITKTSRITRLQILQEQGIF 283

Query: 300 STYIPVSKVPGWFNDENRRLSSSFTVPSL-NLRIRGLNVCAVYGNHYWD-----LYPTIT 139
           S ++P S+VP W++ + +  S SF VP L + +IRGLN+C VYG    D     LYP   
Sbjct: 284 SIFLPGSEVPSWYSHQKQNNSVSFAVPPLPSRKIRGLNLCIVYGLRNTDKKCATLYPPDA 343

Query: 138 KIHNKTKNLTWIYHPVYFGTRVDDRDGEDIVWLSHWKFG-NQLEGGD 1
           +I NKTK L W Y+P+ +G     + GED++WLSHW+FG +QLE GD
Sbjct: 344 EISNKTKVLKWSYNPIVYGV---PQIGEDMLWLSHWRFGTDQLEVGD 387


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score =  123 bits (308), Expect = 2e-26
 Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 7/167 (4%)
 Frame = -1

Query: 480  IEIQGFFRLEPIGAVDSDLINDLGLINVESLGDLEVILYYRFPYWEIRCPIQGLHEFGIF 301
            +E+QG F+LEP+G +++ ++  +GLIN+ESL  +EV ++      E+R  IQ L E GIF
Sbjct: 924  VEVQGLFKLEPVGNINTQILKSVGLINLESLKGVEVEMFNALACTEMRTSIQVLQECGIF 983

Query: 300  STYIPVSKVPGWFNDENRRLSSSFTVPSL-NLRIRGLNVCAVY------GNHYWDLYPTI 142
            S ++P + +P WFN  +   S SF V +    +I+GL++C +Y      G  Y D     
Sbjct: 984  SIFLPGNTIPEWFNQRSESSSISFEVEAKPGHKIKGLSLCTLYTYDKLEGGGYID--ENC 1041

Query: 141  TKIHNKTKNLTWIYHPVYFGTRVDDRDGEDIVWLSHWKFGNQLEGGD 1
             KI+NKT    W Y P ++G     +  E+++WLSHW FG+QLE GD
Sbjct: 1042 AKINNKTICEKWTYSPTFYGM---PKPLEEMLWLSHWTFGDQLEVGD 1085


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/165 (38%), Positives = 97/165 (58%), Gaps = 5/165 (3%)
 Frame = -1

Query: 480  IEIQGFFRLEPIGAVDSDLINDLGLINVESLGDLEVILYYRFPYWEIRCPIQGLHEFGIF 301
            +E+QG F+LEP   +D +++N LGL N  +LG  E+ ++      E+R P Q L E GI 
Sbjct: 835  VEVQGLFKLEPTINMDIEMMNGLGLHNFSTLGSSEMKMFSAIANREMRSPPQVLQECGIV 894

Query: 300  STYIPVSKVPGWFNDENRRLSSSFTV-PSLNLRIRGLNVCAVYGNH---YW-DLYPTITK 136
            S ++  ++VP WF+ ++   S SFT+ P  + +IRGLN+C VY      YW        +
Sbjct: 895  SFFLAGNEVPHWFDHKSTGSSLSFTINPLSDYKIRGLNLCTVYARDHEVYWLHAAGHYAR 954

Query: 135  IHNKTKNLTWIYHPVYFGTRVDDRDGEDIVWLSHWKFGNQLEGGD 1
            ++N+TK   W Y P ++    D  D ED++WLS+WKFG + E GD
Sbjct: 955  MNNETKGTNWSYSPTFYALPED--DDEDMLWLSYWKFGGEFEVGD 997


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score =  118 bits (295), Expect = 7e-25
 Identities = 65/171 (38%), Positives = 98/171 (57%), Gaps = 11/171 (6%)
 Frame = -1

Query: 480  IEIQGFFRLEPIGAVDSDLINDLGLINVESLGDLEVILYYRFPYWEIRCPIQGLHEFGIF 301
            +E+QGFF+LEPI   D ++ N LGL N+  +  ++V ++          P + LHE GI 
Sbjct: 913  VEVQGFFKLEPINNHDKEMANMLGLFNLGPVETIKVEMFSVMTMTSRITPPKVLHECGIC 972

Query: 300  STYIPVSKVPGWFNDENRRLSSSFTVPSLNLR-IRGLNVCAVY----------GNHYWDL 154
            S ++P S+VPGW++ +N     SFT+P  ++R + GLN+C VY           +HY   
Sbjct: 973  SIFLPGSEVPGWYSPQNEGPLISFTMPPSHVRKVCGLNICIVYTCNDVRNGLTDHHY--- 1029

Query: 153  YPTITKIHNKTKNLTWIYHPVYFGTRVDDRDGEDIVWLSHWKFGNQLEGGD 1
                 KI NKTK+L W Y P+++G    ++    ++WLSHWK  + LEGGD
Sbjct: 1030 ----IKIWNKTKDLKWTYSPIFYGIPEPEK---SMLWLSHWKLEDLLEGGD 1073


>ref|XP_002300861.1| predicted protein [Populus trichocarpa] gi|222842587|gb|EEE80134.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
 Frame = -1

Query: 474 IQGFFRLEPIGA-VDSDLINDLGLINVESLGDLEVILYYRFPYWEIRCPIQGLHEFGIFS 298
           I+G+F LE +G  +    +   GL   +SL  + V +           P+Q L E  I+S
Sbjct: 346 IEGYFNLESLGIEIVEKYLGTCGLFTEDSLPSINVHVINNLTRAATISPLQALSEKSIYS 405

Query: 297 TYIPVSKVPGWFNDENRRLSSSFTVPSLN--LRIRGLNVCAVYGNHYWD------LYPTI 142
            ++P+S +P WF+ +N   S S  VP L+   +  G ++ AVY    W+       +  I
Sbjct: 406 IFLPMSDIPTWFSHQNEGDSVSLQVPPLDHGCKFSGFSISAVYA---WESSSAPCFFCPI 462

Query: 141 TKIHNKTKNLTWIYHP--VYFGTRVDDRDGEDIVWLSHWKFGNQLEGGD 1
             + N+TKN  W Y P   +F   V+    +D++WLS W F NQ+EG D
Sbjct: 463 IAVTNRTKNFHWNYSPKITFFMREVE----QDLMWLSCWSFENQVEGID 507


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