BLASTX nr result

ID: Panax21_contig00018581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018581
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318002.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002511495.1| tRNA ligase, putative [Ricinus communis] gi|...   102   3e-20
emb|CBI15298.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002266347.1| PREDICTED: uncharacterized protein LOC100243...    91   1e-16
emb|CAN79617.1| hypothetical protein VITISV_004978 [Vitis vinifera]    91   1e-16

>ref|XP_002318002.1| predicted protein [Populus trichocarpa] gi|222858675|gb|EEE96222.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 8/102 (7%)
 Frame = -2

Query: 421 SNASDKHADVSENAEFSLGSDSEDTEQNDDHQEMK--------TXXXXXXXXXXXXXADS 266
           SNASD+H+D SEN E+S  S S D++ NDD Q MK        T             ++S
Sbjct: 151 SNASDEHSDASENGEYSARSQSGDSDGNDDEQNMKVDQPVEGDTVIAREEQNQPPEESNS 210

Query: 265 PDQDKVEGVQKRRFLDLNELAPGSSFDDGPNSMMKDEDTDNF 140
           P Q++VEGV+KRRFLDLNELAPGS FDD PN++MKDED ++F
Sbjct: 211 PVQEEVEGVRKRRFLDLNELAPGSGFDDSPNTVMKDEDRNDF 252


>ref|XP_002511495.1| tRNA ligase, putative [Ricinus communis]
           gi|223550610|gb|EEF52097.1| tRNA ligase, putative
           [Ricinus communis]
          Length = 721

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 8/102 (7%)
 Frame = -2

Query: 421 SNASDKHADVSENAEFSLGSDSEDTEQNDDHQEMKTXXXXXXXXXXXXXA--------DS 266
           SNASD++ D SENAE+S GS   D + +D+ Q+MK                       +S
Sbjct: 621 SNASDENTDASENAEYSAGSQDSD-DNDDEEQDMKVDRPVEDYNGATEKVQSQPPEKSNS 679

Query: 265 PDQDKVEGVQKRRFLDLNELAPGSSFDDGPNSMMKDEDTDNF 140
           P QD+VEGV+KRRFLDLNELAPGSSFDDGPN+++KDED D+F
Sbjct: 680 PGQDEVEGVRKRRFLDLNELAPGSSFDDGPNTVLKDEDRDDF 721


>emb|CBI15298.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/92 (52%), Positives = 63/92 (68%)
 Frame = -2

Query: 421 SNASDKHADVSENAEFSLGSDSEDTEQNDDHQEMKTXXXXXXXXXXXXXADSPDQDKVEG 242
           SNASD  +D S+  E+S+GS  +D++ NDD QE+K               +SP QD+ EG
Sbjct: 481 SNASDGRSDESDKVEYSMGS--QDSDDNDDDQELKVDQPKS---------NSPVQDEAEG 529

Query: 241 VQKRRFLDLNELAPGSSFDDGPNSMMKDEDTD 146
           V+KRRFLDLNELAPGS FDDGPN+++KD+  D
Sbjct: 530 VRKRRFLDLNELAPGSGFDDGPNTILKDDTND 561


>ref|XP_002266347.1| PREDICTED: uncharacterized protein LOC100243405 [Vitis vinifera]
          Length = 718

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 8/100 (8%)
 Frame = -2

Query: 421 SNASDKHADVSENAEFSLGSDSEDTEQNDDHQEMKTXXXXXXXXXXXXXA--------DS 266
           SNASD  +D S+  E+S+GS  +D++ NDD QE+K                       +S
Sbjct: 620 SNASDGRSDESDKVEYSMGS--QDSDDNDDDQELKVDQPVENYPQTVEKEINQPSEKSNS 677

Query: 265 PDQDKVEGVQKRRFLDLNELAPGSSFDDGPNSMMKDEDTD 146
           P QD+ EGV+KRRFLDLNELAPGS FDDGPN+++KD+  D
Sbjct: 678 PVQDEAEGVRKRRFLDLNELAPGSGFDDGPNTILKDDTND 717


>emb|CAN79617.1| hypothetical protein VITISV_004978 [Vitis vinifera]
          Length = 757

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 8/100 (8%)
 Frame = -2

Query: 421 SNASDKHADVSENAEFSLGSDSEDTEQNDDHQEMKTXXXXXXXXXXXXXA--------DS 266
           SNASD  +D S+  E+S+GS  +D++ NDD QE+K                       +S
Sbjct: 659 SNASDGRSDESDKVEYSMGS--QDSDDNDDDQELKVDQPVENYPQTVEKEINQPSEKSNS 716

Query: 265 PDQDKVEGVQKRRFLDLNELAPGSSFDDGPNSMMKDEDTD 146
           P QD+ EGV+KRRFLDLNELAPGS FDDGPN+++KD+  D
Sbjct: 717 PVQDEAEGVRKRRFLDLNELAPGSGFDDGPNTILKDDTND 756


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