BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018572
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531466.1| pentatricopeptide repeat-containing protein,...   225   4e-57
ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containi...   224   8e-57
emb|CBI25851.3| unnamed protein product [Vitis vinifera]              224   8e-57
gb|ACP39958.1| pentatricopeptide repeat protein [Gossypium hirsu...   216   2e-54
ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containi...   210   1e-52

>ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528920|gb|EEF30916.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score =  225 bits (574), Expect = 4e-57
 Identities = 113/193 (58%), Positives = 137/193 (70%)
 Frame = +2

Query: 2   GGDCKPNVVSYTSVIQSFCEDGRSVEALNIFDRMVAYGCAPNRVTVGTLINGLCVEDHAN 181
           GGDC PNV++YTSVIQ  CE GR+++A  + DRM A GCAPNRVTV TL+  LC++ H  
Sbjct: 263 GGDCNPNVLTYTSVIQGLCEKGRTMDAFAVLDRMEACGCAPNRVTVSTLLKRLCMDGHLE 322

Query: 182 EAYKLIDRVVGDGCVSNSECYSSLVVSLLRIEKFEEAEKVFRRMLASAMNPDGLASSLFI 361
           EAYKLIDRVV  G VS+ +CYS +VV L+RI+K EEAEK+FRR + S + PDGLA SL I
Sbjct: 323 EAYKLIDRVVAGGSVSSCDCYSPIVVCLIRIKKVEEAEKLFRRAVVSGVKPDGLACSLMI 382

Query: 362 KELCLKGRVLDGFHLYIEIENSGCVXXXXXXXXXXLLAGLCQDRYLLEAAKLAGLMVERG 541
           KELC   RVLDG+ L+ EIE  G +          LL GLCQ  Y LEAAKLA  ++E+ 
Sbjct: 383 KELCFVNRVLDGYCLHDEIEKIGSLSTIDSDTYSVLLVGLCQQGYSLEAAKLARSLIEKR 442

Query: 542 IQLKPPYVDNIVE 580
           I LK PYVD +VE
Sbjct: 443 IHLKHPYVDKVVE 455



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 57/180 (31%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
 Frame = +2

Query: 8   DCKPNVVSYTSVIQSFCEDGRSVEALNIFDRMVAYGCAPNRVTVGTLINGLCVEDHANEA 187
           D + +  +YT VI+ FC+ G    A  +   M      P+ VT  ++I G C      EA
Sbjct: 158 DIQADTKAYTIVIRLFCDKGDMDMAQKLMGEMSFNDLYPDMVTYVSIIKGFCDIGRLEEA 217

Query: 188 YKLIDRVVGDGCVSNSECYSSLVVSLLRIEKFEEAEKVFRRMLASA--MNPDGLASSLFI 361
            +L+  +   GCV N   YS+LV  + R    E A ++   M       NP+ L  +  I
Sbjct: 218 CRLVKEMRAHGCVPNVVVYSTLVDGICRFGSVERALELLGGMEKEGGDCNPNVLTYTSVI 277

Query: 362 KELCLKGRVLDGFHLYIEIENSGCVXXXXXXXXXXLLAGLCQDRYLLEAAKLAGLMVERG 541
           + LC KGR +D F +   +E  GC           LL  LC D +L EA KL   +V  G
Sbjct: 278 QGLCEKGRTMDAFAVLDRMEACGCA--PNRVTVSTLLKRLCMDGHLEEAYKLIDRVVAGG 335


>ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Vitis vinifera]
          Length = 638

 Score =  224 bits (571), Expect = 8e-57
 Identities = 116/192 (60%), Positives = 137/192 (71%)
 Frame = +2

Query: 5   GDCKPNVVSYTSVIQSFCEDGRSVEALNIFDRMVAYGCAPNRVTVGTLINGLCVEDHANE 184
           GDC PNVV+YTS+IQS CE G+ +EAL I DRM A GCAPNRVTV  L+ G C E    E
Sbjct: 261 GDCSPNVVTYTSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEE 320

Query: 185 AYKLIDRVVGDGCVSNSECYSSLVVSLLRIEKFEEAEKVFRRMLASAMNPDGLASSLFIK 364
           A+KLID+VV  G VS  ECYSSL+VSL+  +  +EAEK+FRRMLA+A+ PDGLA    IK
Sbjct: 321 AFKLIDKVVAGGNVSYGECYSSLIVSLVGNKNLQEAEKLFRRMLANAVKPDGLACGTLIK 380

Query: 365 ELCLKGRVLDGFHLYIEIENSGCVXXXXXXXXXXLLAGLCQDRYLLEAAKLAGLMVERGI 544
            LCL+GRVLDGFHL+ E EN   +          LL GL Q R+ +EA KLA LMV+RGI
Sbjct: 381 ALCLEGRVLDGFHLFDEFENMEGLSYLDSDIYSILLVGLSQKRHSVEAVKLARLMVDRGI 440

Query: 545 QLKPPYVDNIVE 580
           QLK PY D+IVE
Sbjct: 441 QLKTPYFDSIVE 452



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
 Frame = +2

Query: 14  KPNVVSYTSVIQSFCEDGRSVEALNIFDRMVAYGCAPNRVTVGTLINGLCVEDHANEAYK 193
           + + V+Y SVI+ FCE G    A  +   M      PN +T  T+I G C      +A K
Sbjct: 157 RADTVAYNSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGRLEDACK 216

Query: 194 LIDRVVGDGCVSNSECYSSLVVSLLRIEKFEEAEKVFRRMLASA--MNPDGLASSLFIKE 367
           L   + G GC  N   Y+ ++  + R    E A ++   M   +   +P+ +  +  I+ 
Sbjct: 217 LFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTYTSMIQS 276

Query: 368 LCLKGRVLDGFHLYIEIENSGCVXXXXXXXXXXLLAGLCQDRYLLEAAKLAGLMVERG 541
            C KG++++   +   +   GC           L+ G C +  + EA KL   +V  G
Sbjct: 277 CCEKGKLMEALEILDRMRACGCA--PNRVTVSILMKGFCAEGRVEEAFKLIDKVVAGG 332


>emb|CBI25851.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  224 bits (571), Expect = 8e-57
 Identities = 116/192 (60%), Positives = 137/192 (71%)
 Frame = +2

Query: 5   GDCKPNVVSYTSVIQSFCEDGRSVEALNIFDRMVAYGCAPNRVTVGTLINGLCVEDHANE 184
           GDC PNVV+YTS+IQS CE G+ +EAL I DRM A GCAPNRVTV  L+ G C E    E
Sbjct: 267 GDCSPNVVTYTSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEE 326

Query: 185 AYKLIDRVVGDGCVSNSECYSSLVVSLLRIEKFEEAEKVFRRMLASAMNPDGLASSLFIK 364
           A+KLID+VV  G VS  ECYSSL+VSL+  +  +EAEK+FRRMLA+A+ PDGLA    IK
Sbjct: 327 AFKLIDKVVAGGNVSYGECYSSLIVSLVGNKNLQEAEKLFRRMLANAVKPDGLACGTLIK 386

Query: 365 ELCLKGRVLDGFHLYIEIENSGCVXXXXXXXXXXLLAGLCQDRYLLEAAKLAGLMVERGI 544
            LCL+GRVLDGFHL+ E EN   +          LL GL Q R+ +EA KLA LMV+RGI
Sbjct: 387 ALCLEGRVLDGFHLFDEFENMEGLSYLDSDIYSILLVGLSQKRHSVEAVKLARLMVDRGI 446

Query: 545 QLKPPYVDNIVE 580
           QLK PY D+IVE
Sbjct: 447 QLKTPYFDSIVE 458



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
 Frame = +2

Query: 14  KPNVVSYTSVIQSFCEDGRSVEALNIFDRMVAYGCAPNRVTVGTLINGLCVEDHANEAYK 193
           + + V+Y SVI+ FCE G    A  +   M      PN +T  T+I G C      +A K
Sbjct: 163 RADTVAYNSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGRLEDACK 222

Query: 194 LIDRVVGDGCVSNSECYSSLVVSLLRIEKFEEAEKVFRRMLASA--MNPDGLASSLFIKE 367
           L   + G GC  N   Y+ ++  + R    E A ++   M   +   +P+ +  +  I+ 
Sbjct: 223 LFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTYTSMIQS 282

Query: 368 LCLKGRVLDGFHLYIEIENSGCVXXXXXXXXXXLLAGLCQDRYLLEAAKLAGLMVERG 541
            C KG++++   +   +   GC           L+ G C +  + EA KL   +V  G
Sbjct: 283 CCEKGKLMEALEILDRMRACGCA--PNRVTVSILMKGFCAEGRVEEAFKLIDKVVAGG 338


>gb|ACP39958.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227463014|gb|ACP39959.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 288

 Score =  216 bits (550), Expect = 2e-54
 Identities = 108/193 (55%), Positives = 138/193 (71%)
 Frame = +2

Query: 2   GGDCKPNVVSYTSVIQSFCEDGRSVEALNIFDRMVAYGCAPNRVTVGTLINGLCVEDHAN 181
           GG+C PNV++YTS+I+SFCE G+++EAL I DRM A  C PNR+TV TLI GLC + H  
Sbjct: 78  GGNCSPNVITYTSMIKSFCEKGQTIEALRILDRMEACQCVPNRITVITLITGLCTKGHVE 137

Query: 182 EAYKLIDRVVGDGCVSNSECYSSLVVSLLRIEKFEEAEKVFRRMLASAMNPDGLASSLFI 361
           EAYKLIDRV G G VSNS+CYSSLV++L+RI +  EAEK+FR+ML S   P G+A S  I
Sbjct: 138 EAYKLIDRVAGRG-VSNSDCYSSLVLALIRINRLNEAEKLFRKMLVSGAKPSGIACSTMI 196

Query: 362 KELCLKGRVLDGFHLYIEIENSGCVXXXXXXXXXXLLAGLCQDRYLLEAAKLAGLMVERG 541
           +E+C +GRVLDGF LY EIE    +          LL GLC+  + +EA KLA LM+ R 
Sbjct: 197 REICHEGRVLDGFCLYNEIERMQYISSIDTDIYSILLVGLCRQSHSVEAVKLARLMLRRR 256

Query: 542 IQLKPPYVDNIVE 580
           I+L+ PYVD I++
Sbjct: 257 IRLEAPYVDEIIK 269



 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
 Frame = +2

Query: 8   DCKPNVVSYTSVIQSFCEDGRSVEALNIFDRMVAYGCAPNRVTVGTLINGLCVEDHANEA 187
           D  P++++Y ++I+ FC  GR  EA  +F  M   G +PN VT   L+ G+C      +A
Sbjct: 8   DLYPDMMTYFAMIKGFCNAGRLEEACELFQAMKGQGFSPNAVTYSVLLEGICKYRSTEKA 67

Query: 188 YKLIDRV--VGDGCVSNSECYSSLVVSLLRIEKFEEAEKVFRRMLASAMNPDGLASSLFI 361
            +L+  +   G  C  N   Y+S++ S     +  EA ++  RM A    P+ +     I
Sbjct: 68  LELLGEMEKAGGNCSPNVITYTSMIKSFCEKGQTIEALRILDRMEACQCVPNRITVITLI 127

Query: 362 KELCLKGRVLDGFHLYIEIENSGCVXXXXXXXXXXLLAGLCQDRYLLEAAKLAGLMVERG 541
             LC KG V + + L   +   G            L+  L +   L EA KL   M+  G
Sbjct: 128 TGLCTKGHVEEAYKLIDRVAGRG---VSNSDCYSSLVLALIRINRLNEAEKLFRKMLVSG 184


>ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Cucumis sativus]
           gi|449505643|ref|XP_004162530.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g47360-like [Cucumis sativus]
          Length = 475

 Score =  210 bits (535), Expect = 1e-52
 Identities = 102/193 (52%), Positives = 138/193 (71%)
 Frame = +2

Query: 2   GGDCKPNVVSYTSVIQSFCEDGRSVEALNIFDRMVAYGCAPNRVTVGTLINGLCVEDHAN 181
           GG C PN V+YTS+IQS CE+G  +EAL + DRM  YG APNRV V  L+   C + H  
Sbjct: 264 GGTCSPNTVTYTSIIQSLCEEGHPLEALKVLDRMEEYGYAPNRVAVSFLVKEFCKDGHVE 323

Query: 182 EAYKLIDRVVGDGCVSNSECYSSLVVSLLRIEKFEEAEKVFRRMLASAMNPDGLASSLFI 361
           EAYKLIDRVV  G VS  +CYSSLVV+L++++K  EAEK+FR MLA+ + PDG+A SL I
Sbjct: 324 EAYKLIDRVVARGGVSYGDCYSSLVVTLVKMKKIAEAEKLFRNMLANGVKPDGVACSLMI 383

Query: 362 KELCLKGRVLDGFHLYIEIENSGCVXXXXXXXXXXLLAGLCQDRYLLEAAKLAGLMVERG 541
           +ELCL+ RVLDGF+L  E++ +G +          LL GLC+  + ++AAKLA LM+++G
Sbjct: 384 RELCLEERVLDGFNLCYEVDRNGYLCSIDADIYSLLLVGLCEHDHSVDAAKLARLMLKKG 443

Query: 542 IQLKPPYVDNIVE 580
           I+LKP Y ++I++
Sbjct: 444 IRLKPHYAESIIK 456



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 2/178 (1%)
 Frame = +2

Query: 14  KPNVVSYTSVIQSFCEDGRSVEALNIFDRMVAYGCAPNRVTVGTLINGLCVEDHANEAYK 193
           + +   Y  VI+ F E G   +A+ +   M +    PN +T  +++ G C      +AY 
Sbjct: 161 RADTTMYNLVIRLFTEKGEMDKAMELMKEMDSVDIHPNMITYISMLKGFCDVGRWEDAYG 220

Query: 194 LIDRVVGDGCVSNSECYSSLVVSLLRIEKFEEAEKVFRRM--LASAMNPDGLASSLFIKE 367
           L   +  +GC  N+  YS LV   +R+   +   ++ + M       +P+ +  +  I+ 
Sbjct: 221 LFKDMKENGCAPNTVVYSVLVNGAIRLRIMDRLMEMLKEMEKQGGTCSPNTVTYTSIIQS 280

Query: 368 LCLKGRVLDGFHLYIEIENSGCVXXXXXXXXXXLLAGLCQDRYLLEAAKLAGLMVERG 541
           LC +G  L+   +   +E  G            L+   C+D ++ EA KL   +V RG
Sbjct: 281 LCEEGHPLEALKVLDRMEEYG--YAPNRVAVSFLVKEFCKDGHVEEAYKLIDRVVARG 336