BLASTX nr result
ID: Panax21_contig00018561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00018561
(716 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera] 194 2e-47
ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin... 194 2e-47
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu... 184 2e-44
ref|XP_002320490.1| predicted protein [Populus trichocarpa] gi|2... 178 1e-42
ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|2... 177 2e-42
>emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
Length = 460
Score = 194 bits (493), Expect = 2e-47
Identities = 84/113 (74%), Positives = 93/113 (82%)
Frame = -1
Query: 716 GTCKYGSSCKYHHPRDRHGAGPVVLNTLGLPMRQEEKSCPYYMRTGACKFGVGCKFHHPQ 537
GTCKYGS+CKYHHPRDRHGAGPV LN +GLPMRQEEK C YYMRTG CKFG CKFHHPQ
Sbjct: 81 GTCKYGSTCKYHHPRDRHGAGPVXLNIVGLPMRQEEKPCSYYMRTGLCKFGAACKFHHPQ 140
Query: 536 PESAGSAFPVTGPAAYGSTALSILPSSGVSYTGGLPAWSLTKSTYLSAPRSEG 378
P SAG+ P TGPAA+GST SILPSSG+ Y GGLPAWSL ++ Y+ PR +G
Sbjct: 141 PASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQG 193
Score = 68.9 bits (167), Expect = 1e-09
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = -1
Query: 716 GTCKYGSSCKYHHPRDRHGA-GPVVLNTLGLPMRQEEKSCPYYMRTGACKFGVGCKFHHP 540
G+CKYGS CKYHHP++R L LGLP+R + C +Y G CK+G CKF HP
Sbjct: 307 GSCKYGSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKYGPTCKFDHP 366
>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
product [Vitis vinifera]
Length = 450
Score = 194 bits (492), Expect = 2e-47
Identities = 84/113 (74%), Positives = 93/113 (82%)
Frame = -1
Query: 716 GTCKYGSSCKYHHPRDRHGAGPVVLNTLGLPMRQEEKSCPYYMRTGACKFGVGCKFHHPQ 537
GTCKYGS+CKYHHPRDRHGAGPV LN +GLPMRQEEK C YYMRTG CKFG CKFHHPQ
Sbjct: 102 GTCKYGSTCKYHHPRDRHGAGPVSLNIVGLPMRQEEKPCSYYMRTGLCKFGAACKFHHPQ 161
Query: 536 PESAGSAFPVTGPAAYGSTALSILPSSGVSYTGGLPAWSLTKSTYLSAPRSEG 378
P SAG+ P TGPAA+GST SILPSSG+ Y GGLPAWSL ++ Y+ PR +G
Sbjct: 162 PASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQG 214
Score = 68.9 bits (167), Expect = 1e-09
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = -1
Query: 716 GTCKYGSSCKYHHPRDRHGA-GPVVLNTLGLPMRQEEKSCPYYMRTGACKFGVGCKFHHP 540
G+CKYGS CKYHHP++R L LGLP+R + C +Y G CK+G CKF HP
Sbjct: 297 GSCKYGSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKYGPTCKFDHP 356
>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
gi|223531614|gb|EEF33442.1| zinc finger protein,
putative [Ricinus communis]
Length = 456
Score = 184 bits (466), Expect = 2e-44
Identities = 80/113 (70%), Positives = 91/113 (80%)
Frame = -1
Query: 716 GTCKYGSSCKYHHPRDRHGAGPVVLNTLGLPMRQEEKSCPYYMRTGACKFGVGCKFHHPQ 537
GTCKYGS+CKYHHPRDR+GAGPV N +GLPMRQ+EKSCPYYMRTG+CKFGV CKFHHPQ
Sbjct: 109 GTCKYGSTCKYHHPRDRNGAGPVSFNIVGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 168
Query: 536 PESAGSAFPVTGPAAYGSTALSILPSSGVSYTGGLPAWSLTKSTYLSAPRSEG 378
P G+ P TGPAA G A S LPSSG+ Y GGLP WSL ++ Y+S PR +G
Sbjct: 169 PAPLGTGLPFTGPAASGPMASSNLPSSGLPYVGGLPTWSLPRAPYVSGPRLQG 221
Score = 68.6 bits (166), Expect = 1e-09
Identities = 43/100 (43%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Frame = -1
Query: 716 GTCKYGSSCKYHHPRDR------HGAGPVVLNTLGLPMRQEEKSCPYYMRTGACKFGVGC 555
GTCKYGS CKYHHP++R + GPV GLP R + C Y G CKFG C
Sbjct: 304 GTCKYGSDCKYHHPKERIAQLATNSIGPV-----GLPSRPGQPICSNYSMYGLCKFGPTC 358
Query: 554 KFHHPQPESAGSAFPVTG-PAAYGST--ALSILPSSGVSY 444
+F H P TG P Y + LSI+ SS +SY
Sbjct: 359 RFDH----------PFTGYPYGYSLSLQPLSIIDSSLLSY 388
>ref|XP_002320490.1| predicted protein [Populus trichocarpa] gi|222861263|gb|EEE98805.1|
predicted protein [Populus trichocarpa]
Length = 446
Score = 178 bits (451), Expect = 1e-42
Identities = 77/113 (68%), Positives = 91/113 (80%)
Frame = -1
Query: 716 GTCKYGSSCKYHHPRDRHGAGPVVLNTLGLPMRQEEKSCPYYMRTGACKFGVGCKFHHPQ 537
GTCKYGS+CKYHHPRDR+GAGPV N LGLPMRQ+EKSCPYYMRT +CKFGV CKFHHPQ
Sbjct: 104 GTCKYGSTCKYHHPRDRNGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQ 163
Query: 536 PESAGSAFPVTGPAAYGSTALSILPSSGVSYTGGLPAWSLTKSTYLSAPRSEG 378
P S G++F +TG AA+GST I+PSSG+ Y GGLP WSL ++ +S +G
Sbjct: 164 PASLGTSFSLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPLMSGTNLQG 216
Score = 70.9 bits (172), Expect = 3e-10
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Frame = -1
Query: 716 GTCKYGSSCKYHHPRDRHGAGPVVLNT---LGLPMRQEEKSCPYYMRTGACKFGVGCKFH 546
GTCKYGS CKYHHP++R + NT LGLP R + CP Y G CKFG C++
Sbjct: 299 GTCKYGSDCKYHHPKER--IAQLATNTMGLLGLPSRPGQAVCPDYSMYGICKFGPTCRYD 356
Query: 545 HP---QPESAGSAFPVTGPAAYGSTALSILPSSGVSY 444
HP P + + P +LSI+ SS ++Y
Sbjct: 357 HPIHTYPYNYSLSLP----------SLSIMDSSLITY 383
>ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|222844581|gb|EEE82128.1|
predicted protein [Populus trichocarpa]
Length = 450
Score = 177 bits (449), Expect = 2e-42
Identities = 78/114 (68%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Frame = -1
Query: 716 GTCKYGSSCKYHHPRDRHGAGPVVLNTLGLPMRQEEKSCPYYMRTGACKFGVGCKFHHPQ 537
GTCKYGS+CKYHHPRDR+GAGPV N LGLPMRQ+EKSCPYYMRT +CKFGV CKFHHPQ
Sbjct: 104 GTCKYGSTCKYHHPRDRNGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQ 163
Query: 536 PESAGSAFPVTGPAAYGSTALSILPSSGVSYTGGLPAWSLTKS-TYLSAPRSEG 378
P S G++ P+TG AA+GST I+PSSG+ Y GGLP WSL ++ Y+S +G
Sbjct: 164 PASLGTSLPLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPPYMSGTHLQG 217
Score = 73.9 bits (180), Expect = 3e-11
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Frame = -1
Query: 716 GTCKYGSSCKYHHPRDRHGAGPVVLNTLG---LPMRQEEKSCPYYMRTGACKFGVGCKFH 546
GTCKYGS CKYHHP++R + NT+G LP+R + CP Y G CKFG C++
Sbjct: 298 GTCKYGSDCKYHHPKER--IAQLATNTMGPFGLPLRPGQAVCPDYSMYGICKFGPTCRYD 355
Query: 545 HPQPESAGSAFPVTGPAAYGST--ALSILPSSGVSY 444
HP P T P Y + +LS++ SS V+Y
Sbjct: 356 HPLP---------TYPYNYSLSLPSLSMMDSSLVTY 382