BLASTX nr result

ID: Panax21_contig00018545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018545
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog ...   258   5e-67
dbj|BAF02935.1| RAD51 homolog [Populus nigra]                         256   1e-66
ref|XP_003609937.1| DNA repair protein RAD51-like protein [Medic...   255   3e-66
ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog ...   253   1e-65
gb|AFK39468.1| unknown [Medicago truncatula]                          253   1e-65

>ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog [Vitis vinifera]
           gi|297738498|emb|CBI27743.3| unnamed protein product
           [Vitis vinifera]
          Length = 337

 Score =  258 bits (658), Expect = 5e-67
 Identities = 128/146 (87%), Positives = 136/146 (93%)
 Frame = +1

Query: 1   QNTVQEHDEQEEMQHGPSPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKDLLQIKG 180
           Q   Q H+E E+MQHGP PVE LQASGIA+LD+KKLKDAGLCTVESVAYSPRKDLLQIKG
Sbjct: 4   QKMAQAHEEVEDMQHGPFPVEHLQASGIASLDIKKLKDAGLCTVESVAYSPRKDLLQIKG 63

Query: 181 ISEAKVDKIVEAASKLVPMGFTSAKQLHAQREEIILITSGSRELDKVLEGGIETGSITEI 360
           ISEAKVDKIVEAASKLVP+GFTSA QLHAQR EII ITSGSRELDK+LEGG+ETGSITEI
Sbjct: 64  ISEAKVDKIVEAASKLVPLGFTSASQLHAQRLEIIQITSGSRELDKILEGGLETGSITEI 123

Query: 361 YGEFRSGKTQLCHTLCVTCQLPLEQG 438
           YGEFRSGKTQLCHTLCVTCQLPL+QG
Sbjct: 124 YGEFRSGKTQLCHTLCVTCQLPLDQG 149


>dbj|BAF02935.1| RAD51 homolog [Populus nigra]
          Length = 342

 Score =  256 bits (655), Expect = 1e-66
 Identities = 124/142 (87%), Positives = 138/142 (97%)
 Frame = +1

Query: 13  QEHDEQEEMQHGPSPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKDLLQIKGISEA 192
           Q+H++ EE+QHGP PVEQLQASGIA+LDVKKLKDAGLCTVESVA+SPRK+LLQIKGISEA
Sbjct: 13  QQHEDHEEVQHGPFPVEQLQASGIASLDVKKLKDAGLCTVESVAFSPRKELLQIKGISEA 72

Query: 193 KVDKIVEAASKLVPMGFTSAKQLHAQREEIILITSGSRELDKVLEGGIETGSITEIYGEF 372
           KVDKI+EAASKLVP+GFTSA QLHAQR+EII ITSGSRELDK+LEGG+ETGSITE+YGEF
Sbjct: 73  KVDKIIEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKILEGGVETGSITEMYGEF 132

Query: 373 RSGKTQLCHTLCVTCQLPLEQG 438
           RSGKTQLCHTLCVTCQLPL+QG
Sbjct: 133 RSGKTQLCHTLCVTCQLPLDQG 154


>ref|XP_003609937.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355510992|gb|AES92134.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 341

 Score =  255 bits (651), Expect = 3e-66
 Identities = 124/147 (84%), Positives = 139/147 (94%), Gaps = 1/147 (0%)
 Frame = +1

Query: 1   QNTVQEHDEQ-EEMQHGPSPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKDLLQIK 177
           + T Q+HD++ EE+QHGP PVEQLQASGIAALD+KKLKDAG+CTVESVAY+PRKDLLQIK
Sbjct: 7   EKTAQQHDQETEEIQHGPLPVEQLQASGIAALDIKKLKDAGICTVESVAYTPRKDLLQIK 66

Query: 178 GISEAKVDKIVEAASKLVPMGFTSAKQLHAQREEIILITSGSRELDKVLEGGIETGSITE 357
           GIS+AKVDKI+EAA KLVPMGFTSA +LHAQRE II IT+GSRELDK+LEGGIETGSITE
Sbjct: 67  GISDAKVDKIIEAAGKLVPMGFTSASELHAQRESIIQITTGSRELDKILEGGIETGSITE 126

Query: 358 IYGEFRSGKTQLCHTLCVTCQLPLEQG 438
           +YGEFRSGKTQLCHTLCVTCQLPL+QG
Sbjct: 127 LYGEFRSGKTQLCHTLCVTCQLPLDQG 153


>ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
           gi|449518135|ref|XP_004166099.1| PREDICTED: DNA repair
           protein RAD51 homolog [Cucumis sativus]
          Length = 340

 Score =  253 bits (646), Expect = 1e-65
 Identities = 125/146 (85%), Positives = 137/146 (93%)
 Frame = +1

Query: 1   QNTVQEHDEQEEMQHGPSPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKDLLQIKG 180
           Q   +E +E +E+QHGP PVEQLQASGIAA+DVKKLKDAGLCTVESVAYSPRK+LLQIKG
Sbjct: 7   QKPSEEQEEADEIQHGPFPVEQLQASGIAAMDVKKLKDAGLCTVESVAYSPRKELLQIKG 66

Query: 181 ISEAKVDKIVEAASKLVPMGFTSAKQLHAQREEIILITSGSRELDKVLEGGIETGSITEI 360
           ISEAKVDKI+EAASK+VP+GFTSA QLHAQR EII +TSGSRELDK+LEGGIETGSITEI
Sbjct: 67  ISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIETGSITEI 126

Query: 361 YGEFRSGKTQLCHTLCVTCQLPLEQG 438
           YGEFRSGKTQLCHTLCVTCQLPL+QG
Sbjct: 127 YGEFRSGKTQLCHTLCVTCQLPLDQG 152


>gb|AFK39468.1| unknown [Medicago truncatula]
          Length = 161

 Score =  253 bits (645), Expect = 1e-65
 Identities = 123/146 (84%), Positives = 138/146 (94%), Gaps = 1/146 (0%)
 Frame = +1

Query: 1   QNTVQEHDEQ-EEMQHGPSPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKDLLQIK 177
           + T Q+HD++ EE+QHGP PVEQLQASGIAALD+KKLKDAG+CTVESVAY+PRKDLLQIK
Sbjct: 7   EKTAQQHDQETEEIQHGPLPVEQLQASGIAALDIKKLKDAGICTVESVAYTPRKDLLQIK 66

Query: 178 GISEAKVDKIVEAASKLVPMGFTSAKQLHAQREEIILITSGSRELDKVLEGGIETGSITE 357
           GIS+AKVDKI+EAA KLVPMGFTSA +LHAQRE II IT+GSRELDK+LEGGIETGSITE
Sbjct: 67  GISDAKVDKIIEAAGKLVPMGFTSASELHAQRESIIQITTGSRELDKILEGGIETGSITE 126

Query: 358 IYGEFRSGKTQLCHTLCVTCQLPLEQ 435
           +YGEFRSGKTQLCHTLCVTCQLPL+Q
Sbjct: 127 LYGEFRSGKTQLCHTLCVTCQLPLDQ 152


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