BLASTX nr result

ID: Panax21_contig00018542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018542
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...    73   5e-11
ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containi...    73   5e-11
tpg|DAA46621.1| TPA: ATP binding protein [Zea mays]                    72   1e-10
tpg|DAA46620.1| TPA: hypothetical protein ZEAMMB73_163376 [Zea m...    72   1e-10
gb|ACN27302.1| unknown [Zea mays]                                      72   1e-10

>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 31/55 (56%), Positives = 47/55 (85%)
 Frame = +2

Query: 2   LLPESLYKRISSIGDPSISVVPVLDQWVQKGREIRKQELQDIIRELKNYKQFKHA 166
           ++ ++LY+RIS +GDP+ISV P+LDQWV +GR +++ EL+ II+EL+ YK+FKHA
Sbjct: 26  VVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHA 80


>ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 227

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 31/55 (56%), Positives = 47/55 (85%)
 Frame = +2

Query: 2   LLPESLYKRISSIGDPSISVVPVLDQWVQKGREIRKQELQDIIRELKNYKQFKHA 166
           ++ ++LY+RIS +GDP+ISV P+LDQWV +GR +++ EL+ II+EL+ YK+FKHA
Sbjct: 26  VVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHA 80


>tpg|DAA46621.1| TPA: ATP binding protein [Zea mays]
          Length = 308

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +3

Query: 312 NSPEVCPALSCLLDFYKVRHLIKVEVRPNLILNAEKELGIV 434
           +S  VC ALSCLLDFY VRHLIKVE+RPNLILNAEKELGIV
Sbjct: 76  SSAIVCAALSCLLDFYNVRHLIKVEMRPNLILNAEKELGIV 116


>tpg|DAA46620.1| TPA: hypothetical protein ZEAMMB73_163376 [Zea mays]
          Length = 175

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +3

Query: 312 NSPEVCPALSCLLDFYKVRHLIKVEVRPNLILNAEKELGIV 434
           +S  VC ALSCLLDFY VRHLIKVE+RPNLILNAEKELGIV
Sbjct: 76  SSAIVCAALSCLLDFYNVRHLIKVEMRPNLILNAEKELGIV 116


>gb|ACN27302.1| unknown [Zea mays]
          Length = 362

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +3

Query: 312 NSPEVCPALSCLLDFYKVRHLIKVEVRPNLILNAEKELGIV 434
           +S  VC ALSCLLDFY VRHLIKVE+RPNLILNAEKELGIV
Sbjct: 130 SSAIVCAALSCLLDFYNVRHLIKVEMRPNLILNAEKELGIV 170


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