BLASTX nr result

ID: Panax21_contig00018532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018532
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_003553289.1| PREDICTED: pentatricopeptide repeat-containi...    74   9e-12
ref|XP_003524728.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11
ref|XP_002298561.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002526972.1| pentatricopeptide repeat-containing protein,...    72   6e-11

>ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial [Vitis vinifera]
           gi|296087577|emb|CBI34833.3| unnamed protein product
           [Vitis vinifera]
          Length = 445

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = -2

Query: 375 YAIVRDMTAAGLGLNKFCYAGLIAAHRNKTPLMDDTAAKV 256
           YAIVRDMTAAGLGLNKFCYAGLIAAH+NK PL DDTA+K+
Sbjct: 166 YAIVRDMTAAGLGLNKFCYAGLIAAHKNKIPLTDDTASKI 205


>ref|XP_003553289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial-like [Glycine max]
          Length = 450

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = -2

Query: 375 YAIVRDMTAAGLGLNKFCYAGLIAAHRNKTPLMDDTAAKV 256
           YAIVRDMTAAGLGLN+FCYAGLI AH+NKTPL DD AAKV
Sbjct: 170 YAIVRDMTAAGLGLNEFCYAGLIVAHKNKTPLPDDFAAKV 209


>ref|XP_003524728.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial-like [Glycine max]
          Length = 450

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -2

Query: 375 YAIVRDMTAAGLGLNKFCYAGLIAAHRNKTPLMDDTAAKV 256
           YAIVRDMTAAGLGLN+FCYAGLI AH+NK PL DD AAKV
Sbjct: 170 YAIVRDMTAAGLGLNEFCYAGLIVAHKNKKPLPDDFAAKV 209


>ref|XP_002298561.1| predicted protein [Populus trichocarpa] gi|222845819|gb|EEE83366.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = -2

Query: 375 YAIVRDMTAAGLGLNKFCYAGLIAAHRNKTPLMDDTAAKV 256
           YAIVRDMT+AG+GLNKFCYAGLIAAH+NKTP+ +D A K+
Sbjct: 162 YAIVRDMTSAGVGLNKFCYAGLIAAHKNKTPIAEDVATKI 201


>ref|XP_002526972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533724|gb|EEF35459.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 510

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = -2

Query: 375 YAIVRDMTAAGLGLNKFCYAGLIAAHRNKTPLMDDTAAKV 256
           YAIVRDMTAAG GLNKFCYAGLIAAH NK PL DDTA ++
Sbjct: 208 YAIVRDMTAAGAGLNKFCYAGLIAAHMNKKPLSDDTAKRI 247


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