BLASTX nr result

ID: Panax21_contig00018527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018527
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258...   197   2e-48
ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|1...   179   5e-43
ref|XP_002523833.1| conserved hypothetical protein [Ricinus comm...   174   3e-41
gb|AFK38933.1| unknown [Medicago truncatula]                          170   4e-40
ref|NP_001238654.1| uncharacterized protein LOC100306681 precurs...   167   3e-39

>ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258720 [Vitis vinifera]
           gi|147828169|emb|CAN68427.1| hypothetical protein
           VITISV_031997 [Vitis vinifera]
           gi|296084887|emb|CBI28296.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  197 bits (502), Expect = 2e-48
 Identities = 103/167 (61%), Positives = 128/167 (76%), Gaps = 8/167 (4%)
 Frame = -1

Query: 819 HQIMAMVFFALALARVELSACQVLKGSISCLDCDKDYDFSGIKVAVKCNQVKKLAVTTTG 640
           ++++A +FFAL LA ++LS C V+KGS++CLDC + +DFSGIKV VKC++VKKLA+ TT 
Sbjct: 4   NRVIAPLFFALVLATIDLSTCHVMKGSVTCLDCHRHHDFSGIKVLVKCDRVKKLAMATTE 63

Query: 639 KDGSFKTELPKDTPTSTHHGSLNCLARVLGGPDQLYASRKDMVSNVVKAHDSDDSSYTIS 460
            DGSFKT LP DT TS+    LNCLA++LGGP+QLYA RK+ VS +VKA   DDSSYTIS
Sbjct: 64  ADGSFKTNLPSDTQTSS--PPLNCLAKLLGGPNQLYAFRKNTVSKIVKAR--DDSSYTIS 119

Query: 459 KPLSFYTSINSGI--------GSSKTIDLPLPKEWGLAPSSYYLNPF 343
            PLSF T+  S +        GSSKT+DLPLP EWGLAPSSYY+ PF
Sbjct: 120 TPLSFSTTCPSSVKGAKYGEFGSSKTVDLPLPPEWGLAPSSYYI-PF 165


>ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|118488493|gb|ABK96060.1|
           unknown [Populus trichocarpa]
           gi|222849897|gb|EEE87444.1| predicted protein [Populus
           trichocarpa]
          Length = 173

 Score =  179 bits (455), Expect = 5e-43
 Identities = 94/168 (55%), Positives = 122/168 (72%), Gaps = 9/168 (5%)
 Frame = -1

Query: 819 HQIMAMVFFALALARVELSACQVLKGSISCLDCDKDYDFSGIKVAVKCNQVKKLAVTTTG 640
           H +  ++  ALAL+ ++LS CQVLKG +SCLDC   YD+S IKV VKC++V+KLA TTT 
Sbjct: 4   HPLTIVLLLALALSGIQLSTCQVLKGKVSCLDCGGHYDYSEIKVGVKCDKVRKLATTTTQ 63

Query: 639 KDGSFKTELPKDTPTSTHHGSLNCLARVLGGPDQLYASRKDMVSNVVKAHDSDDSSYTIS 460
            DGSF+ +LP    TST    L CLA++LGGP QLY SR++MVS +V+ HDS  +SYTIS
Sbjct: 64  SDGSFEVKLPPG--TSTAATPLICLAKLLGGPSQLYVSRQNMVSKIVQTHDS--NSYTIS 119

Query: 459 KPLSFYTSINSG---------IGSSKTIDLPLPKEWGLAPSSYYLNPF 343
            PL+F ++ ++G          GSSKT+DLPLP+EWGLAPSSYY+ PF
Sbjct: 120 TPLAFSSTCSAGGGKCGVSNQFGSSKTVDLPLPREWGLAPSSYYV-PF 166


>ref|XP_002523833.1| conserved hypothetical protein [Ricinus communis]
           gi|223536921|gb|EEF38559.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 169

 Score =  174 bits (440), Expect = 3e-41
 Identities = 92/161 (57%), Positives = 115/161 (71%), Gaps = 5/161 (3%)
 Frame = -1

Query: 810 MAMVFFALALARVELSACQVLKGSISCLDCDKDYDFSGIKVAVKCNQVKKLAVTTTGKDG 631
           + ++ FAL+L+ ++ S  QVLK  +SCLDC   YDFSGIKV VKC  VKKLA TTT   G
Sbjct: 7   VVVLLFALSLSGIQFSTSQVLKAKVSCLDCTAHYDFSGIKVLVKCANVKKLATTTTKSKG 66

Query: 630 SFKTELPKDTPTSTHHGSLNCLARVLGGPDQLYASRKDMVSNVVKAHDSDDSSYTISKPL 451
           SF+ ELP  +  S     LNCLA+++GG  Q+YA+RK+MVS +VK  DS  SSYTIS PL
Sbjct: 67  SFEVELP--SGNSKAETPLNCLAKLIGGTSQIYATRKNMVSRIVKTKDS--SSYTISTPL 122

Query: 450 SFYTS-----INSGIGSSKTIDLPLPKEWGLAPSSYYLNPF 343
           +F T+     +  GIG SKT+DLPLP+EWGLAPSSYY+ PF
Sbjct: 123 AFSTAFPEGQLKGGIGESKTVDLPLPREWGLAPSSYYV-PF 162


>gb|AFK38933.1| unknown [Medicago truncatula]
          Length = 170

 Score =  170 bits (430), Expect = 4e-40
 Identities = 89/165 (53%), Positives = 113/165 (68%), Gaps = 8/165 (4%)
 Frame = -1

Query: 813 IMAMVFFALALARVELSACQVLKGSISCLDCDKDYDFSGIKVAVKCNQVKKLAVTTTGKD 634
           ++  + FAL L R++LSAC++L+G +SC+DC   YD S IKV VKC  VK LA+TTT +D
Sbjct: 6   VITALLFALVLVRIDLSACEILQGKVSCVDCTHSYDLSDIKVTVKCEGVKNLAMTTTEED 65

Query: 633 GSFKTELPKDTPTSTHHGSLNCLARVLGGPDQLYASRKDMVSNVVKAHDSDDSSYTISKP 454
           GSFK  LP D   +    S+NCLA++LGGP QLYA +++ VS V+K    +++SY IS P
Sbjct: 66  GSFKVNLPSDNTKT----SMNCLAKLLGGPIQLYAKKQNQVSQVIKG--KEENSYIISTP 119

Query: 453 LSFYTS--------INSGIGSSKTIDLPLPKEWGLAPSSYYLNPF 343
           LSF  S            IGSSKTIDLPLP EWGLAPSSYY+ PF
Sbjct: 120 LSFLISCPQNTNCKATKPIGSSKTIDLPLPPEWGLAPSSYYV-PF 163


>ref|NP_001238654.1| uncharacterized protein LOC100306681 precursor [Glycine max]
           gi|255629265|gb|ACU14977.1| unknown [Glycine max]
          Length = 173

 Score =  167 bits (423), Expect = 3e-39
 Identities = 89/166 (53%), Positives = 114/166 (68%), Gaps = 8/166 (4%)
 Frame = -1

Query: 816 QIMAMVFFALALARVELSACQVLKGSISCLDCDKDYDFSGIKVAVKCNQVKKLAVTTTGK 637
           Q++ +  FALALA++  S CQV++G +SC+DC  +YD S IKV+V+C+ VKKLA+ TT  
Sbjct: 5   QVITVFLFALALAKIYPSTCQVVQGKVSCVDCTHNYDLSDIKVSVRCDGVKKLALATTEN 64

Query: 636 DGSFKTELPKDTPTSTHHGSLNCLARVLGGPDQLYASRKDMVSNVVKAHDSDDSSYTISK 457
           DGSFK +LP D  T       NCLA++LGGP QLY SR++ VS ++K    D +SYTIS 
Sbjct: 65  DGSFKVDLPLD-HTKPSSSVNNCLAKLLGGPVQLYVSRENQVSQIIKG--KDQNSYTIST 121

Query: 456 PLSFYTSI--------NSGIGSSKTIDLPLPKEWGLAPSSYYLNPF 343
            LSF TS            +GSSKT+DLPLP EWGLAPSSYY+ PF
Sbjct: 122 SLSFRTSCPLTTKCKGGKQVGSSKTVDLPLPPEWGLAPSSYYV-PF 166


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