BLASTX nr result

ID: Panax21_contig00018511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018511
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15262.3| unnamed protein product [Vitis vinifera]              327   2e-87
ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 ...   327   2e-87
ref|XP_002511533.1| ribonuclease z, chloroplast, putative [Ricin...   324   1e-86
ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glyc...   318   4e-85
ref|XP_002330087.1| predicted protein [Populus trichocarpa] gi|2...   313   2e-83

>emb|CBI15262.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  327 bits (837), Expect = 2e-87
 Identities = 155/203 (76%), Positives = 177/203 (87%)
 Frame = +2

Query: 38  GMSIEGYQIEGLSIAGHETCVILPTLNLSFDIGRCPQRAISQSFLFISHGHMDHIGGLPM 217
           G+ IEGY +EGLSI G ETC+ILP+L L+FDIGRCPQRAISQ FLFISHGHMDHIGGLPM
Sbjct: 56  GIQIEGYPVEGLSIGGQETCIILPSLKLAFDIGRCPQRAISQDFLFISHGHMDHIGGLPM 115

Query: 218 YVATRGLYSMTPPTIIVPTVIKQSVERLFEAHRSMDQSDLNHTLIGLDVGEEFRLRKDVK 397
           YVATRGLY M PP IIVP  IK++VE LF+ HR+MD+S+L H LIGL+VGEEF LRKD+K
Sbjct: 116 YVATRGLYRMKPPIIIVPKAIKENVEMLFQVHRAMDESELKHNLIGLNVGEEFYLRKDLK 175

Query: 398 VKAFRTYHTIPSQGYIVYSVKQKLKKEFVGLPANEIKDLKFSGVEVTYTTTAPEIAFTGD 577
           V+AFRTYH IPSQGY+VYSVKQKLK+E+VGLP NEIK+LK SGVE+TYT T PEIAFTGD
Sbjct: 176 VRAFRTYHVIPSQGYVVYSVKQKLKQEYVGLPGNEIKNLKLSGVEITYTMTTPEIAFTGD 235

Query: 578 TMSDFIVDDANSDVLNAKILIME 646
           TMSDFI+D  N D L A++LIME
Sbjct: 236 TMSDFILDHTNVDALMARVLIME 258


>ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 [Vitis vinifera]
          Length = 290

 Score =  327 bits (837), Expect = 2e-87
 Identities = 155/203 (76%), Positives = 177/203 (87%)
 Frame = +2

Query: 38  GMSIEGYQIEGLSIAGHETCVILPTLNLSFDIGRCPQRAISQSFLFISHGHMDHIGGLPM 217
           G+ IEGY +EGLSI G ETC+ILP+L L+FDIGRCPQRAISQ FLFISHGHMDHIGGLPM
Sbjct: 16  GIQIEGYPVEGLSIGGQETCIILPSLKLAFDIGRCPQRAISQDFLFISHGHMDHIGGLPM 75

Query: 218 YVATRGLYSMTPPTIIVPTVIKQSVERLFEAHRSMDQSDLNHTLIGLDVGEEFRLRKDVK 397
           YVATRGLY M PP IIVP  IK++VE LF+ HR+MD+S+L H LIGL+VGEEF LRKD+K
Sbjct: 76  YVATRGLYRMKPPIIIVPKAIKENVEMLFQVHRAMDESELKHNLIGLNVGEEFYLRKDLK 135

Query: 398 VKAFRTYHTIPSQGYIVYSVKQKLKKEFVGLPANEIKDLKFSGVEVTYTTTAPEIAFTGD 577
           V+AFRTYH IPSQGY+VYSVKQKLK+E+VGLP NEIK+LK SGVE+TYT T PEIAFTGD
Sbjct: 136 VRAFRTYHVIPSQGYVVYSVKQKLKQEYVGLPGNEIKNLKLSGVEITYTMTTPEIAFTGD 195

Query: 578 TMSDFIVDDANSDVLNAKILIME 646
           TMSDFI+D  N D L A++LIME
Sbjct: 196 TMSDFILDHTNVDALMARVLIME 218


>ref|XP_002511533.1| ribonuclease z, chloroplast, putative [Ricinus communis]
           gi|223550648|gb|EEF52135.1| ribonuclease z, chloroplast,
           putative [Ricinus communis]
          Length = 269

 Score =  324 bits (830), Expect = 1e-86
 Identities = 155/202 (76%), Positives = 177/202 (87%)
 Frame = +2

Query: 41  MSIEGYQIEGLSIAGHETCVILPTLNLSFDIGRCPQRAISQSFLFISHGHMDHIGGLPMY 220
           M+IE Y IEGLSI GHETC+ILP+LNL+FDIGRCPQRAISQ FLFISH HMDHIGGLPMY
Sbjct: 1   MTIEEYPIEGLSIGGHETCIILPSLNLAFDIGRCPQRAISQDFLFISHAHMDHIGGLPMY 60

Query: 221 VATRGLYSMTPPTIIVPTVIKQSVERLFEAHRSMDQSDLNHTLIGLDVGEEFRLRKDVKV 400
           VATRGLY M PPTIIVPT IK++VE+LFE HR +D S+LNH LIGLDVGEEF +RKD+KV
Sbjct: 61  VATRGLYRMKPPTIIVPTSIKETVEQLFEVHRKLDGSELNHKLIGLDVGEEFYVRKDLKV 120

Query: 401 KAFRTYHTIPSQGYIVYSVKQKLKKEFVGLPANEIKDLKFSGVEVTYTTTAPEIAFTGDT 580
           +AFRTYH I SQGY+VYS+K KLK+EF+GL  NEIK+LK SGVE+T T TAPEIAFTGDT
Sbjct: 121 RAFRTYHAIQSQGYVVYSIKHKLKQEFLGLSGNEIKNLKASGVEITNTVTAPEIAFTGDT 180

Query: 581 MSDFIVDDANSDVLNAKILIME 646
           MSDFI+D+ N D L A+IL+ME
Sbjct: 181 MSDFIIDETNIDALRARILVME 202


>ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glycine max]
          Length = 279

 Score =  318 bits (816), Expect = 4e-85
 Identities = 152/202 (75%), Positives = 173/202 (85%)
 Frame = +2

Query: 41  MSIEGYQIEGLSIAGHETCVILPTLNLSFDIGRCPQRAISQSFLFISHGHMDHIGGLPMY 220
           + IEGY + GLSI GHETCVI PTL ++FDIGRCP RA+SQ+FL I+H HMDHIGGLPMY
Sbjct: 6   LEIEGYTVGGLSIGGHETCVIFPTLKVAFDIGRCPPRAVSQNFLLITHAHMDHIGGLPMY 65

Query: 221 VATRGLYSMTPPTIIVPTVIKQSVERLFEAHRSMDQSDLNHTLIGLDVGEEFRLRKDVKV 400
           VATRGLY M PPTIIVP  +K+ VE+LFE HR MDQS+L H LIGLDVGEEF LRKD+KV
Sbjct: 66  VATRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELKHNLIGLDVGEEFYLRKDLKV 125

Query: 401 KAFRTYHTIPSQGYIVYSVKQKLKKEFVGLPANEIKDLKFSGVEVTYTTTAPEIAFTGDT 580
           KAFRTYH IPSQGYI+YS KQKLK E+VGL  NEIK+LK SGVE+TYT T PEIAFTGDT
Sbjct: 126 KAFRTYHVIPSQGYILYSEKQKLKPEYVGLSGNEIKNLKSSGVEITYTLTEPEIAFTGDT 185

Query: 581 MSDFIVDDANSDVLNAKILIME 646
           MSDFIVD+ N+DVL A+IL++E
Sbjct: 186 MSDFIVDENNTDVLRARILVLE 207


>ref|XP_002330087.1| predicted protein [Populus trichocarpa] gi|222871221|gb|EEF08352.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  313 bits (801), Expect = 2e-83
 Identities = 146/200 (73%), Positives = 173/200 (86%)
 Frame = +2

Query: 47  IEGYQIEGLSIAGHETCVILPTLNLSFDIGRCPQRAISQSFLFISHGHMDHIGGLPMYVA 226
           IEGY +EGLSI GHETC+I  +LN++FDIGRCPQRAISQ FLFISH HMDHIGGLPMYVA
Sbjct: 1   IEGYPVEGLSIGGHETCIIFSSLNMAFDIGRCPQRAISQDFLFISHAHMDHIGGLPMYVA 60

Query: 227 TRGLYSMTPPTIIVPTVIKQSVERLFEAHRSMDQSDLNHTLIGLDVGEEFRLRKDVKVKA 406
           TRGLY M PPT++VPT IK++VE+LFE HR +D S+L H LI LDVG+EF +RKD+KV+A
Sbjct: 61  TRGLYRMKPPTVVVPTCIKETVEQLFEVHRRLDGSELKHHLIALDVGQEFYVRKDLKVRA 120

Query: 407 FRTYHTIPSQGYIVYSVKQKLKKEFVGLPANEIKDLKFSGVEVTYTTTAPEIAFTGDTMS 586
           F+TYH I SQGY+VYSVKQKLK+E++GL  NEIK LK SGVE+T T T+PEIAFTGDTMS
Sbjct: 121 FKTYHAIQSQGYVVYSVKQKLKQEYLGLSGNEIKSLKSSGVEITNTVTSPEIAFTGDTMS 180

Query: 587 DFIVDDANSDVLNAKILIME 646
           DFI+D+ N DVL AK+L+ME
Sbjct: 181 DFIIDETNIDVLRAKVLVME 200


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