BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018502
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272014.2| PREDICTED: transcription elongation regulato...   109   2e-22
ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative ...   103   1e-20
ref|XP_002315062.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002311295.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_003607201.1| Transcription elongation regulator [Medicago...   102   4e-20

>ref|XP_002272014.2| PREDICTED: transcription elongation regulator 1-like [Vitis vinifera]
            gi|297738259|emb|CBI27460.3| unnamed protein product
            [Vitis vinifera]
          Length = 1046

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/62 (85%), Positives = 54/62 (87%)
 Frame = +1

Query: 334  RRKEAVESYQALLVETIKDPQASWMESKPKLEKDPQGRATRHQLDQSDLEKLFREHVKML 513
            RRKEAV SYQALLVETIKDPQ SW ESKPKLEKDPQ RAT   LD SDLEKLFREH+KML
Sbjct: 880  RRKEAVSSYQALLVETIKDPQVSWTESKPKLEKDPQARATNSDLDPSDLEKLFREHIKML 939

Query: 514  HE 519
            HE
Sbjct: 940  HE 941



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   SSRWSKVKDGLRIDPRYKSVKHDDREVLFNEYISELKSVE 122
           S+RWS+VKD LR DPRYK VKH+DRE+LFNEYISELK+ E
Sbjct: 798 STRWSRVKDSLRNDPRYKCVKHEDREILFNEYISELKAAE 837


>ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative [Ricinus communis]
           gi|223545064|gb|EEF46576.1| Pre-mRNA-processing protein
           PRP40, putative [Ricinus communis]
          Length = 886

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/62 (82%), Positives = 53/62 (85%)
 Frame = +1

Query: 334 RRKEAVESYQALLVETIKDPQASWMESKPKLEKDPQGRATRHQLDQSDLEKLFREHVKML 513
           RRKEAV S+QALLVETIKDPQASW ESK +LEKDPQGR T   LD SD EKLFREHVKML
Sbjct: 719 RRKEAVASFQALLVETIKDPQASWTESKTRLEKDPQGRGTNPNLDPSDTEKLFREHVKML 778

Query: 514 HE 519
           HE
Sbjct: 779 HE 780



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = +3

Query: 3   SSRWSKVKDGLRIDPRYKSVKHDDREVLFNEYISELKSVE 122
           +SRWSKVK+ LR DPRYKSVKH++REVLFNEY+SELK+ E
Sbjct: 637 NSRWSKVKESLRNDPRYKSVKHEEREVLFNEYLSELKAAE 676


>ref|XP_002315062.1| predicted protein [Populus trichocarpa] gi|222864102|gb|EEF01233.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/62 (80%), Positives = 54/62 (87%)
 Frame = +1

Query: 334 RRKEAVESYQALLVETIKDPQASWMESKPKLEKDPQGRATRHQLDQSDLEKLFREHVKML 513
           RRKEAV S+QALLVET+KDPQASW ESKPKL+KDPQ RAT   LD SD EKLFREH+KML
Sbjct: 9   RRKEAVASFQALLVETLKDPQASWTESKPKLDKDPQRRATHPDLDPSDTEKLFREHMKML 68

Query: 514 HE 519
           HE
Sbjct: 69  HE 70


>ref|XP_002311295.1| predicted protein [Populus trichocarpa] gi|222851115|gb|EEE88662.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score =  102 bits (255), Expect = 3e-20
 Identities = 49/62 (79%), Positives = 53/62 (85%)
 Frame = +1

Query: 334 RRKEAVESYQALLVETIKDPQASWMESKPKLEKDPQGRATRHQLDQSDLEKLFREHVKML 513
           RR EAV S+QALLVET KDPQASW ESKP+LEKDPQGR T   LD SD+EKLFREHVKML
Sbjct: 129 RRNEAVASFQALLVETTKDPQASWTESKPRLEKDPQGRETNPDLDPSDIEKLFREHVKML 188

Query: 514 HE 519
           H+
Sbjct: 189 HD 190



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +3

Query: 21  VKDGLRIDPRYKSVKHDDREVLFNEYISELKSVE 122
           VKD LR DPRYKSVKH+DREV FNEY+SELK+ E
Sbjct: 53  VKDSLRNDPRYKSVKHEDREVFFNEYLSELKAAE 86


>ref|XP_003607201.1| Transcription elongation regulator [Medicago truncatula]
            gi|355508256|gb|AES89398.1| Transcription elongation
            regulator [Medicago truncatula]
          Length = 1013

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/62 (79%), Positives = 53/62 (85%)
 Frame = +1

Query: 334  RRKEAVESYQALLVETIKDPQASWMESKPKLEKDPQGRATRHQLDQSDLEKLFREHVKML 513
            RRKEAV S+QALLVE IKDP ASW ESKPKLEKDPQGRAT   LD +D+EKLFR+HVKML
Sbjct: 847  RRKEAVTSFQALLVERIKDPMASWTESKPKLEKDPQGRATNSDLDSADMEKLFRDHVKML 906

Query: 514  HE 519
             E
Sbjct: 907  QE 908



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +3

Query: 15  SKVKDGLRIDPRYKSVKHDDREVLFNEYISELKSVE 122
           S VK+ LR DPRYKSVKH+DRE+LFNEYISELK+VE
Sbjct: 769 SLVKESLRDDPRYKSVKHEDRELLFNEYISELKAVE 804