BLASTX nr result

ID: Panax21_contig00018497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018497
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592677.1| mscS family protein, putative [Medicago trun...   244   7e-63
ref|XP_002454503.1| hypothetical protein SORBIDRAFT_04g032300 [S...   242   3e-62
ref|XP_002524547.1| conserved hypothetical protein [Ricinus comm...   241   5e-62
ref|XP_002278453.1| PREDICTED: uncharacterized mscS family prote...   240   8e-62
ref|NP_001159287.1| uncharacterized protein LOC100304377 [Zea ma...   240   8e-62

>ref|XP_003592677.1| mscS family protein, putative [Medicago truncatula]
            gi|355481725|gb|AES62928.1| mscS family protein, putative
            [Medicago truncatula]
          Length = 926

 Score =  244 bits (622), Expect = 7e-63
 Identities = 122/168 (72%), Positives = 137/168 (81%)
 Frame = -2

Query: 505  LMRFMREDEALKAISLFEGASDSKGISRRALKNWVVNAFRERRALALSLNDTKTAVNKLH 326
            LMRFMREDEA+K I+LFEGASDS  IS+ ALKNWVVNAFRERRALAL+LNDTKTAVNKLH
Sbjct: 632  LMRFMREDEAIKTINLFEGASDSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLH 691

Query: 325  QMXXXXXXXXXXXXXXXXXXVATTHFFVFISSQLLLVVFVFGNTCKTTFEAIIFLFVMHP 146
            +M                  +ATT F +F+SSQL+LV F+FGNTCKT FEAIIFLFVMHP
Sbjct: 692  RMLNFLVAIIILVIWLLILEIATTKFLLFVSSQLVLVAFIFGNTCKTVFEAIIFLFVMHP 751

Query: 145  FDVGDRCEVDGVQLIVEEMNILTTIFLRYDNQKITYPNSVLATKPISN 2
            FDVGDRCE+D  Q++VEEMNILTT+FLR+DNQKIT PNSVLATK I N
Sbjct: 752  FDVGDRCEIDATQMVVEEMNILTTVFLRFDNQKITIPNSVLATKAIHN 799


>ref|XP_002454503.1| hypothetical protein SORBIDRAFT_04g032300 [Sorghum bicolor]
            gi|241934334|gb|EES07479.1| hypothetical protein
            SORBIDRAFT_04g032300 [Sorghum bicolor]
          Length = 1050

 Score =  242 bits (617), Expect = 3e-62
 Identities = 118/168 (70%), Positives = 139/168 (82%)
 Frame = -2

Query: 505  LMRFMREDEALKAISLFEGASDSKGISRRALKNWVVNAFRERRALALSLNDTKTAVNKLH 326
            +MRFMR++EA+KA+ LFEGA +   +S+R+LKNWVVNAFRER+ALAL+LNDTKTAVNKL+
Sbjct: 757  MMRFMRQEEAVKAMDLFEGAQEHNRVSKRSLKNWVVNAFRERKALALTLNDTKTAVNKLN 816

Query: 325  QMXXXXXXXXXXXXXXXXXXVATTHFFVFISSQLLLVVFVFGNTCKTTFEAIIFLFVMHP 146
            QM                  +ATTHFFVF+SSQLLL VFVFGNT KT FEAI+FLFVMHP
Sbjct: 817  QMANVVVGIIVFALWLLILGIATTHFFVFLSSQLLLAVFVFGNTLKTVFEAIVFLFVMHP 876

Query: 145  FDVGDRCEVDGVQLIVEEMNILTTIFLRYDNQKITYPNSVLATKPISN 2
            FDVGDRCE++GVQ++VEEMNI+TT+FLRYDN KI YPNSVLATKPI N
Sbjct: 877  FDVGDRCEIEGVQMVVEEMNIMTTVFLRYDNLKIYYPNSVLATKPIMN 924


>ref|XP_002524547.1| conserved hypothetical protein [Ricinus communis]
            gi|223536221|gb|EEF37874.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 709

 Score =  241 bits (615), Expect = 5e-62
 Identities = 120/168 (71%), Positives = 138/168 (82%)
 Frame = -2

Query: 505  LMRFMREDEALKAISLFEGASDSKGISRRALKNWVVNAFRERRALALSLNDTKTAVNKLH 326
            +MRFM+EDEALKA++LFEGAS+SK IS+  LKNWVVNAFRERRALAL+LNDTKTAVNKLH
Sbjct: 509  IMRFMQEDEALKAMTLFEGASESKKISKSCLKNWVVNAFRERRALALTLNDTKTAVNKLH 568

Query: 325  QMXXXXXXXXXXXXXXXXXXVATTHFFVFISSQLLLVVFVFGNTCKTTFEAIIFLFVMHP 146
            +M                  +AT+ F VF+SSQLLLV F+FGNTCKT FEAIIFLFV+HP
Sbjct: 569  RMVNILIGILIAVIWLLILGIATSKFLVFLSSQLLLVAFIFGNTCKTVFEAIIFLFVIHP 628

Query: 145  FDVGDRCEVDGVQLIVEEMNILTTIFLRYDNQKITYPNSVLATKPISN 2
            FDVGDRCE+DGVQ++VEEMNILTT+FLRYDNQKI   NS+LATK I N
Sbjct: 629  FDVGDRCEIDGVQMVVEEMNILTTVFLRYDNQKIIIANSILATKAIGN 676


>ref|XP_002278453.1| PREDICTED: uncharacterized mscS family protein At1g78610-like [Vitis
            vinifera]
          Length = 897

 Score =  240 bits (613), Expect = 8e-62
 Identities = 121/168 (72%), Positives = 134/168 (79%)
 Frame = -2

Query: 505  LMRFMREDEALKAISLFEGASDSKGISRRALKNWVVNAFRERRALALSLNDTKTAVNKLH 326
            +MRFMREDEALK +SLFEGAS S  IS+ ALKNWVVNAFRERRALAL+LNDTKTAVNKLH
Sbjct: 598  IMRFMREDEALKTMSLFEGASQSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLH 657

Query: 325  QMXXXXXXXXXXXXXXXXXXVATTHFFVFISSQLLLVVFVFGNTCKTTFEAIIFLFVMHP 146
            QM                  +AT  F  ++SSQLLLV F+FGNTCK  FEAIIFLFVMHP
Sbjct: 658  QMVNVVVVIIVLITSLLILGIATKQFMTYLSSQLLLVAFIFGNTCKNIFEAIIFLFVMHP 717

Query: 145  FDVGDRCEVDGVQLIVEEMNILTTIFLRYDNQKITYPNSVLATKPISN 2
            FDVGDRCE+DGVQ+IVEEMNILTT+FLR DNQKI +PNS LAT+PI N
Sbjct: 718  FDVGDRCEIDGVQMIVEEMNILTTVFLRGDNQKIVFPNSTLATRPIGN 765


>ref|NP_001159287.1| uncharacterized protein LOC100304377 [Zea mays]
            gi|223943213|gb|ACN25690.1| unknown [Zea mays]
            gi|413938170|gb|AFW72721.1| hypothetical protein
            ZEAMMB73_243815 [Zea mays]
          Length = 966

 Score =  240 bits (613), Expect = 8e-62
 Identities = 118/168 (70%), Positives = 139/168 (82%)
 Frame = -2

Query: 505  LMRFMREDEALKAISLFEGASDSKGISRRALKNWVVNAFRERRALALSLNDTKTAVNKLH 326
            L+RFMR++EA+KA++LFEGA +   +S+R+LKNWVVNAFRER+ALAL+LNDTKTAVNKL+
Sbjct: 673  LIRFMRQEEAVKAMNLFEGAQEHNRVSKRSLKNWVVNAFRERKALALTLNDTKTAVNKLN 732

Query: 325  QMXXXXXXXXXXXXXXXXXXVATTHFFVFISSQLLLVVFVFGNTCKTTFEAIIFLFVMHP 146
            QM                  +ATTHFFVF+SSQLLL VFVFGNT KT FEAI+FLFVMHP
Sbjct: 733  QMVNVVVGIIVFVLWLLILGIATTHFFVFLSSQLLLAVFVFGNTLKTVFEAIVFLFVMHP 792

Query: 145  FDVGDRCEVDGVQLIVEEMNILTTIFLRYDNQKITYPNSVLATKPISN 2
            FDVGDRCE++GVQ +VEEMNI+TT+FLRYDN KI YPNSVLATKPI N
Sbjct: 793  FDVGDRCEIEGVQAVVEEMNIMTTVFLRYDNLKIYYPNSVLATKPIMN 840


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