BLASTX nr result

ID: Panax21_contig00018494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018494
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168562.1| PREDICTED: eukaryotic translation initiation...    87   2e-15
ref|XP_004135731.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...    87   2e-15
ref|XP_002330181.1| predicted protein [Populus trichocarpa] gi|2...    83   4e-14
ref|XP_004168464.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...    82   6e-14
ref|XP_004135732.1| PREDICTED: eukaryotic translation initiation...    82   6e-14

>ref|XP_004168562.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           A-like, partial [Cucumis sativus]
          Length = 457

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 47/88 (53%), Positives = 56/88 (63%)
 Frame = +2

Query: 2   KSRDMICPSERKISKLDEMLPNLAEVVDKEHKRLLARKSIIENRXXXXXXXXXXXXXXXX 181
           K+R MICP  RK SK  ++LP+LA++VDKEH+RLLARKSIIE R                
Sbjct: 20  KARAMICPPVRKASKTGDILPDLADIVDKEHRRLLARKSIIEKRKEEQERQLLEMEREEE 79

Query: 182 XXXXXXXXXTEEAEQKRLASEYEQRKHQ 265
                    TEEAEQKRLA+EYEQRK+Q
Sbjct: 80  SRRLKLLKITEEAEQKRLAAEYEQRKNQ 107



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/45 (82%), Positives = 41/45 (91%)
 Frame = +3

Query: 441 SLMELALNEQLRERQEMEKRLQKLGKTMDFLERAKREDAAPLIEA 575
           +LM+LAL EQLRERQEMEK+LQKL KTMD+LERAKRE  APLIEA
Sbjct: 152 TLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREVVAPLIEA 196


>ref|XP_004135731.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit A-like [Cucumis sativus]
          Length = 904

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 47/88 (53%), Positives = 56/88 (63%)
 Frame = +2

Query: 2   KSRDMICPSERKISKLDEMLPNLAEVVDKEHKRLLARKSIIENRXXXXXXXXXXXXXXXX 181
           K+R MICP  RK SK  ++LP+LA++VDKEH+RLLARKSIIE R                
Sbjct: 470 KARAMICPPVRKASKTGDILPDLADIVDKEHRRLLARKSIIEKRKEEQERQLLEMEREEE 529

Query: 182 XXXXXXXXXTEEAEQKRLASEYEQRKHQ 265
                    TEEAEQKRLA+EYEQRK+Q
Sbjct: 530 SRRLKLLKITEEAEQKRLAAEYEQRKNQ 557



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/45 (82%), Positives = 41/45 (91%)
 Frame = +3

Query: 441 SLMELALNEQLRERQEMEKRLQKLGKTMDFLERAKREDAAPLIEA 575
           +LM+LAL EQLRERQEMEK+LQKL KTMD+LERAKRE  APLIEA
Sbjct: 602 TLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREVVAPLIEA 646


>ref|XP_002330181.1| predicted protein [Populus trichocarpa] gi|222871637|gb|EEF08768.1|
           predicted protein [Populus trichocarpa]
          Length = 972

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 47/88 (53%), Positives = 52/88 (59%)
 Frame = +2

Query: 2   KSRDMICPSERKISKLDEMLPNLAEVVDKEHKRLLARKSIIENRXXXXXXXXXXXXXXXX 181
           K+R MI P  +K SKL E+LP L E+VDKEHKRLLARKSIIE R                
Sbjct: 531 KARAMIYPPTKKSSKLGEILPGLGEIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEE 590

Query: 182 XXXXXXXXXTEEAEQKRLASEYEQRKHQ 265
                    TEEAEQKRLA+EYEQR  Q
Sbjct: 591 SRRLKQQKITEEAEQKRLAAEYEQRNKQ 618



 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = +3

Query: 444 LMELALNEQLRERQEMEKRLQKLGKTMDFLERAKREDAAPLIEA 575
           LME AL+EQLRERQEMEK+LQKL KTMD+LERAKRE+AAPLIEA
Sbjct: 663 LMERALSEQLRERQEMEKKLQKLVKTMDYLERAKREEAAPLIEA 706


>ref|XP_004168464.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit A-like [Cucumis sativus]
          Length = 970

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 46/88 (52%), Positives = 54/88 (61%)
 Frame = +2

Query: 2   KSRDMICPSERKISKLDEMLPNLAEVVDKEHKRLLARKSIIENRXXXXXXXXXXXXXXXX 181
           K+R MI P   K SK  ++LP+LA++VDKEHKRLLARKSIIE R                
Sbjct: 531 KARAMIYPPVGKASKTSDILPDLADIVDKEHKRLLARKSIIEKRKEELERQLLEMEREEE 590

Query: 182 XXXXXXXXXTEEAEQKRLASEYEQRKHQ 265
                    TEEAEQKRLA+EYEQRK+Q
Sbjct: 591 SKRLKLLKITEEAEQKRLAAEYEQRKNQ 618



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = +3

Query: 441 SLMELALNEQLRERQEMEKRLQKLGKTMDFLERAKREDAAPLIEA 575
           +LM+LAL EQLRERQEMEK+LQKL KTMD+LERAKRE+AAPLIEA
Sbjct: 663 TLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEA 707


>ref|XP_004135732.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           A-like [Cucumis sativus]
          Length = 790

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 46/88 (52%), Positives = 54/88 (61%)
 Frame = +2

Query: 2   KSRDMICPSERKISKLDEMLPNLAEVVDKEHKRLLARKSIIENRXXXXXXXXXXXXXXXX 181
           K+R MI P   K SK  ++LP+LA++VDKEHKRLLARKSIIE R                
Sbjct: 483 KARAMIYPPVGKASKTSDILPDLADIVDKEHKRLLARKSIIEKRKEELERQLLEMEREEE 542

Query: 182 XXXXXXXXXTEEAEQKRLASEYEQRKHQ 265
                    TEEAEQKRLA+EYEQRK+Q
Sbjct: 543 SKRLKLLKITEEAEQKRLAAEYEQRKNQ 570



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = +3

Query: 441 SLMELALNEQLRERQEMEKRLQKLGKTMDFLERAKREDAAPLIEA 575
           +LM+LAL EQLRERQEMEK+LQKL KTMD+LERAKRE+AAPLIEA
Sbjct: 615 TLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEA 659


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