BLASTX nr result

ID: Panax21_contig00018436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018436
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15459.3| unnamed protein product [Vitis vinifera]              112   5e-23
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   112   5e-23
ref|XP_002532154.1| conserved hypothetical protein [Ricinus comm...    91   2e-16
ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|2...    90   4e-16
ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron sp...    82   6e-14

>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
          Length = 830

 Score =  112 bits (280), Expect = 5e-23
 Identities = 64/113 (56%), Positives = 74/113 (65%), Gaps = 5/113 (4%)
 Frame = -1

Query: 324 WLNKWPSPNPLTQSNSK--PSKPIKQSESRNLDSNSSGRTTAIERIVLRLRNLGLGSXXX 151
           W+NKWPSPNP  +S  K   SK    +ESR  D  S   T+AIERIVLRLRNLGLGS   
Sbjct: 78  WINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRSG--TSAIERIVLRLRNLGLGSDDE 135

Query: 150 XXXXXXXXG--PMQVTGQERLGDLLRRDWVRPDTILVED-DEDGTVLPWEREE 1
                       M VTG E+LGDLL+RDWVRPD++L+ED DED  +LPWER E
Sbjct: 136 DKNEGEVESGDTMPVTGDEKLGDLLQRDWVRPDSMLIEDEDEDDMILPWERGE 188


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  112 bits (280), Expect = 5e-23
 Identities = 64/113 (56%), Positives = 74/113 (65%), Gaps = 5/113 (4%)
 Frame = -1

Query: 324 WLNKWPSPNPLTQSNSK--PSKPIKQSESRNLDSNSSGRTTAIERIVLRLRNLGLGSXXX 151
           W+NKWPSPNP  +S  K   SK    +ESR  D  S   T+AIERIVLRLRNLGLGS   
Sbjct: 78  WINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRSG--TSAIERIVLRLRNLGLGSDDE 135

Query: 150 XXXXXXXXG--PMQVTGQERLGDLLRRDWVRPDTILVED-DEDGTVLPWEREE 1
                       M VTG E+LGDLL+RDWVRPD++L+ED DED  +LPWER E
Sbjct: 136 DKNEGEVESGDTMPVTGDEKLGDLLQRDWVRPDSMLIEDEDEDDMILPWERGE 188


>ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
           gi|223528164|gb|EEF30228.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 745

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 13/121 (10%)
 Frame = -1

Query: 324 WLNKWP---SPNPLTQSNSKPSKPIK-QSESRNLDSNSSGRTTAIERIVLRLRNLGLGSX 157
           WL+KW    SP P  +++ K ++  K QS +++   N      AIERIVLRLRNLGLGS 
Sbjct: 67  WLSKWAPHSSPPPTVKTSPKLAQDKKIQSLTKDKGQN------AIERIVLRLRNLGLGSD 120

Query: 156 XXXXXXXXXXGP-----MQVTGQERLGDLLRRDWVRPDTILVEDDE----DGTVLPWERE 4
                      P     + VTG+ERL DLL+R+WVRPDTI ++DDE    D  VLPWER+
Sbjct: 121 DEEEEGDMEYKPNGGDSIAVTGEERLADLLQREWVRPDTIFIKDDEEDDNDDLVLPWERK 180

Query: 3   E 1
           E
Sbjct: 181 E 181


>ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|222858586|gb|EEE96133.1|
           predicted protein [Populus trichocarpa]
          Length = 806

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 56/116 (48%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
 Frame = -1

Query: 324 WLNKW-PSPNPLTQSNSKPSKPIKQSESRNLDSNSSGRTTAIERIVLRLRNLGLGSXXXX 148
           W++KW PS N    S   P   + Q E  +  SN  G+  AIERIVLRLRNLGLGS    
Sbjct: 63  WISKWKPSQN---HSIKNPPSEVSQ-EKPHYFSNDKGQN-AIERIVLRLRNLGLGSDDED 117

Query: 147 XXXXXXXGPMQ---VTGQERLGDLLRRDWVRPDTILVEDDE----DGTVLPWEREE 1
                    +    +TG+ERLGDLL+R+WVRPDT++  +DE    D +VLPWEREE
Sbjct: 118 ELEGLEGSEINGGGLTGEERLGDLLKREWVRPDTVVFSNDEGSDSDESVLPWEREE 173


>ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Glycine max]
          Length = 734

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 51/113 (45%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
 Frame = -1

Query: 324 WLNKWPSPNPLTQSNSKPSKPIKQSESRNLDSNSSGRTTAIERIVLRLRNLGLGSXXXXX 145
           WL K PSP   T+  +    PI   +  N           +ERIVLRLRNLGL S     
Sbjct: 54  WLTKSPSPKRATEPLTA-GDPIPDKKPHN----------PVERIVLRLRNLGLPSEEEEQ 102

Query: 144 XXXXXXG---PMQVTGQERLGDLLRRDWVRPDTILV--EDDEDGTVLPWEREE 1
                     P  VTG+ERLG+LLRR+WVRPD +LV  +D E+  +LPWEREE
Sbjct: 103 EEEEEIPANNPAPVTGEERLGELLRREWVRPDAVLVGEDDGEEEMILPWEREE 155


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