BLASTX nr result
ID: Panax21_contig00018436
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00018436 (618 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI15459.3| unnamed protein product [Vitis vinifera] 112 5e-23 emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera] 112 5e-23 ref|XP_002532154.1| conserved hypothetical protein [Ricinus comm... 91 2e-16 ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|2... 90 4e-16 ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron sp... 82 6e-14 >emb|CBI15459.3| unnamed protein product [Vitis vinifera] Length = 830 Score = 112 bits (280), Expect = 5e-23 Identities = 64/113 (56%), Positives = 74/113 (65%), Gaps = 5/113 (4%) Frame = -1 Query: 324 WLNKWPSPNPLTQSNSK--PSKPIKQSESRNLDSNSSGRTTAIERIVLRLRNLGLGSXXX 151 W+NKWPSPNP +S K SK +ESR D S T+AIERIVLRLRNLGLGS Sbjct: 78 WINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRSG--TSAIERIVLRLRNLGLGSDDE 135 Query: 150 XXXXXXXXG--PMQVTGQERLGDLLRRDWVRPDTILVED-DEDGTVLPWEREE 1 M VTG E+LGDLL+RDWVRPD++L+ED DED +LPWER E Sbjct: 136 DKNEGEVESGDTMPVTGDEKLGDLLQRDWVRPDSMLIEDEDEDDMILPWERGE 188 >emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera] Length = 850 Score = 112 bits (280), Expect = 5e-23 Identities = 64/113 (56%), Positives = 74/113 (65%), Gaps = 5/113 (4%) Frame = -1 Query: 324 WLNKWPSPNPLTQSNSK--PSKPIKQSESRNLDSNSSGRTTAIERIVLRLRNLGLGSXXX 151 W+NKWPSPNP +S K SK +ESR D S T+AIERIVLRLRNLGLGS Sbjct: 78 WINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRSG--TSAIERIVLRLRNLGLGSDDE 135 Query: 150 XXXXXXXXG--PMQVTGQERLGDLLRRDWVRPDTILVED-DEDGTVLPWEREE 1 M VTG E+LGDLL+RDWVRPD++L+ED DED +LPWER E Sbjct: 136 DKNEGEVESGDTMPVTGDEKLGDLLQRDWVRPDSMLIEDEDEDDMILPWERGE 188 >ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis] gi|223528164|gb|EEF30228.1| conserved hypothetical protein [Ricinus communis] Length = 745 Score = 90.5 bits (223), Expect = 2e-16 Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 13/121 (10%) Frame = -1 Query: 324 WLNKWP---SPNPLTQSNSKPSKPIK-QSESRNLDSNSSGRTTAIERIVLRLRNLGLGSX 157 WL+KW SP P +++ K ++ K QS +++ N AIERIVLRLRNLGLGS Sbjct: 67 WLSKWAPHSSPPPTVKTSPKLAQDKKIQSLTKDKGQN------AIERIVLRLRNLGLGSD 120 Query: 156 XXXXXXXXXXGP-----MQVTGQERLGDLLRRDWVRPDTILVEDDE----DGTVLPWERE 4 P + VTG+ERL DLL+R+WVRPDTI ++DDE D VLPWER+ Sbjct: 121 DEEEEGDMEYKPNGGDSIAVTGEERLADLLQREWVRPDTIFIKDDEEDDNDDLVLPWERK 180 Query: 3 E 1 E Sbjct: 181 E 181 >ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|222858586|gb|EEE96133.1| predicted protein [Populus trichocarpa] Length = 806 Score = 89.7 bits (221), Expect = 4e-16 Identities = 56/116 (48%), Positives = 70/116 (60%), Gaps = 8/116 (6%) Frame = -1 Query: 324 WLNKW-PSPNPLTQSNSKPSKPIKQSESRNLDSNSSGRTTAIERIVLRLRNLGLGSXXXX 148 W++KW PS N S P + Q E + SN G+ AIERIVLRLRNLGLGS Sbjct: 63 WISKWKPSQN---HSIKNPPSEVSQ-EKPHYFSNDKGQN-AIERIVLRLRNLGLGSDDED 117 Query: 147 XXXXXXXGPMQ---VTGQERLGDLLRRDWVRPDTILVEDDE----DGTVLPWEREE 1 + +TG+ERLGDLL+R+WVRPDT++ +DE D +VLPWEREE Sbjct: 118 ELEGLEGSEINGGGLTGEERLGDLLKREWVRPDTVVFSNDEGSDSDESVLPWEREE 173 >ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Glycine max] Length = 734 Score = 82.4 bits (202), Expect = 6e-14 Identities = 51/113 (45%), Positives = 62/113 (54%), Gaps = 5/113 (4%) Frame = -1 Query: 324 WLNKWPSPNPLTQSNSKPSKPIKQSESRNLDSNSSGRTTAIERIVLRLRNLGLGSXXXXX 145 WL K PSP T+ + PI + N +ERIVLRLRNLGL S Sbjct: 54 WLTKSPSPKRATEPLTA-GDPIPDKKPHN----------PVERIVLRLRNLGLPSEEEEQ 102 Query: 144 XXXXXXG---PMQVTGQERLGDLLRRDWVRPDTILV--EDDEDGTVLPWEREE 1 P VTG+ERLG+LLRR+WVRPD +LV +D E+ +LPWEREE Sbjct: 103 EEEEEIPANNPAPVTGEERLGELLRREWVRPDAVLVGEDDGEEEMILPWEREE 155