BLASTX nr result
ID: Panax21_contig00018432
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00018432 (1480 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago ... 68 3e-11 ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc... 63 2e-07 gb|EAY83345.1| hypothetical protein OsI_38563 [Oryza sativa Indi... 54 2e-07 ref|NP_001066915.1| Os12g0528500 [Oryza sativa Japonica Group] g... 52 7e-07 gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ... 60 1e-06 >ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago truncatula] gi|355478915|gb|AES60118.1| hypothetical protein MTR_1g040620 [Medicago truncatula] Length = 665 Score = 67.8 bits (164), Expect(2) = 3e-11 Identities = 27/42 (64%), Positives = 34/42 (80%) Frame = -3 Query: 212 SKYHPNILDEVRRAFMLKGPCQPLKHNFPQTQIGSYLRRFNP 87 S YHPN DE+RRA++ KGPCQP +HNFPQ G++LR+FNP Sbjct: 55 SCYHPNDRDEIRRAYLAKGPCQPKEHNFPQRPFGTFLRKFNP 96 Score = 28.1 bits (61), Expect(2) = 3e-11 Identities = 12/18 (66%), Positives = 16/18 (88%) Frame = -2 Query: 336 KVDLENLEADPGLRKKIS 283 +VDLENL A+PG RK++S Sbjct: 38 EVDLENLPANPGERKQLS 55 >ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula] gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein [Medicago truncatula] Length = 892 Score = 63.2 bits (152), Expect = 2e-07 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%) Frame = -3 Query: 212 SKYHPNILDEVRRAFMLKGPCQPLKHNFPQTQIGSYLRRFNPI-IKIFRNWCQVIFRK 42 S YHPN + +RRA++ KGPCQP +HNFPQ +IG+ +RRF P F NW + K Sbjct: 152 STYHPNDQEIIRRAYLQKGPCQPNQHNFPQRKIGNSMRRFCPSWFNEFGNWLEYSIEK 209 >gb|EAY83345.1| hypothetical protein OsI_38563 [Oryza sativa Indica Group] Length = 221 Score = 53.5 bits (127), Expect(2) = 2e-07 Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Frame = -3 Query: 212 SKYHPNILDEVRRAFMLKGPCQPLKHNFPQTQIGSYLRRFNP-IIKIFRNWCQ 57 S+Y+ N+ DEVRRA++ +GP Q H FP+ + +RRFNP K F NW + Sbjct: 25 SQYNVNVCDEVRRAYLQRGPFQTPDHKFPKKDMSGCMRRFNPDWFKTFSNWLE 77 Score = 29.3 bits (64), Expect(2) = 2e-07 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -2 Query: 342 DDKVDLENLEADPGLRKKIS 283 +DKVDL NL AD LRK IS Sbjct: 6 EDKVDLSNLPADLALRKPIS 25 >ref|NP_001066915.1| Os12g0528500 [Oryza sativa Japonica Group] gi|77556515|gb|ABA99311.1| hypothetical protein LOC_Os12g34390 [Oryza sativa Japonica Group] gi|113649422|dbj|BAF29934.1| Os12g0528500 [Oryza sativa Japonica Group] Length = 422 Score = 51.6 bits (122), Expect(2) = 7e-07 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Frame = -3 Query: 212 SKYHPNILDEVRRAFMLKGPCQPLKHNFPQTQIGSYLRRFNP-IIKIFRNWCQ 57 S+Y+ N+ DEVRRA++ +GP Q H F Q + +RRFNP K F NW + Sbjct: 25 SQYNVNVRDEVRRAYLQRGPFQTPDHKFSQKDMSGCMRRFNPDWFKTFSNWLE 77 Score = 29.3 bits (64), Expect(2) = 7e-07 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -2 Query: 342 DDKVDLENLEADPGLRKKIS 283 +DKVDL NL AD LRK IS Sbjct: 6 EDKVDLSNLPADLALRKPIS 25 >gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for transposase from Ipomoea purpurea gb|4063769 and is a member of the transmembrane 4 family PF|00335 [Arabidopsis thaliana] Length = 811 Score = 60.5 bits (145), Expect = 1e-06 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Frame = -3 Query: 206 YHPNILDEVRRAFMLKGPCQPLKHNFPQTQIGSYLRRFNP-IIKIFRNWCQVIFRK 42 YHPN DEVRR ++++GPCQP H F Q IG LRRFNP ++ +W + K Sbjct: 75 YHPNQRDEVRREYLIRGPCQPRGHKFKQIAIGKVLRRFNPKWFDLYGDWLEYSVEK 130