BLASTX nr result

ID: Panax21_contig00018407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018407
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280074.1| PREDICTED: transcription factor bHLH30 [Viti...   148   4e-34
emb|CBI21967.3| unnamed protein product [Vitis vinifera]              145   3e-33
emb|CAN60803.1| hypothetical protein VITISV_020681 [Vitis vinifera]   116   5e-32
ref|XP_002325576.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_002327321.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26

>ref|XP_002280074.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 259

 Score =  148 bits (374), Expect = 4e-34
 Identities = 75/124 (60%), Positives = 94/124 (75%)
 Frame = +1

Query: 1   QQEDGSDGASYSIRASLCCEYKHEVLSDLRKALESLHLKTVREEIATLGSRMMNRFVITG 180
           QQE G D A YSI+ASLCC+YK  VLSDLR+AL+++HLKTVR EIATLG RM N FV+TG
Sbjct: 136 QQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIATLGGRMKNVFVMTG 195

Query: 181 CKEGNIKDTEGCQLLASSVRQALRSVLDKFYASEEFSTNPSLSNKRRRVXXXXXXXXXXX 360
           CK+GN++DTE  +L A+SV QALRSVLDKF AS++FS+  + SNKR+R+           
Sbjct: 196 CKDGNLEDTETRKLHANSVHQALRSVLDKFPASQDFSSRSTSSNKRQRISIFNSSSSSPF 255

Query: 361 GELW 372
           G+ W
Sbjct: 256 GDFW 259


>emb|CBI21967.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  145 bits (366), Expect = 3e-33
 Identities = 73/109 (66%), Positives = 91/109 (83%)
 Frame = +1

Query: 1   QQEDGSDGASYSIRASLCCEYKHEVLSDLRKALESLHLKTVREEIATLGSRMMNRFVITG 180
           QQE G D A YSI+ASLCC+YK  VLSDLR+AL+++HLKTVR EIATLG RM N FV+TG
Sbjct: 75  QQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIATLGGRMKNVFVMTG 134

Query: 181 CKEGNIKDTEGCQLLASSVRQALRSVLDKFYASEEFSTNPSLSNKRRRV 327
           CK+GN++DTE  +L A+SV QALRSVLDKF AS++FS+  + SNKR+R+
Sbjct: 135 CKDGNLEDTETRKLHANSVHQALRSVLDKFPASQDFSSRSTSSNKRQRI 183


>emb|CAN60803.1| hypothetical protein VITISV_020681 [Vitis vinifera]
          Length = 323

 Score =  116 bits (290), Expect(2) = 5e-32
 Identities = 58/84 (69%), Positives = 70/84 (83%)
 Frame = +1

Query: 1   QQEDGSDGASYSIRASLCCEYKHEVLSDLRKALESLHLKTVREEIATLGSRMMNRFVITG 180
           QQE G D A YSI+ASLCC+YK  VLSDLR+AL+++HLKTVR EIATLG RM N FV+TG
Sbjct: 137 QQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIATLGGRMKNVFVMTG 196

Query: 181 CKEGNIKDTEGCQLLASSVRQALR 252
           CK+GN++DTE  +L A+SV QALR
Sbjct: 197 CKDGNLEDTETRKLHANSVHQALR 220



 Score = 46.6 bits (109), Expect(2) = 5e-32
 Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
 Frame = +2

Query: 266 NFMHR--KSSLQILRFQTRGEEFLFKILQAHLHLESSGERGDF 388
           N +H+  + S Q  R +TRG+ FLF IL+AHLHLE+SGE  DF
Sbjct: 213 NSVHQALRISHQEARLRTRGKGFLFSILRAHLHLETSGETNDF 255


>ref|XP_002325576.1| predicted protein [Populus trichocarpa] gi|222862451|gb|EEE99957.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/124 (53%), Positives = 83/124 (66%)
 Frame = +1

Query: 1   QQEDGSDGASYSIRASLCCEYKHEVLSDLRKALESLHLKTVREEIATLGSRMMNRFVITG 180
           QQEDG   A Y IRAS+CC+ K  +LSDLR+AL++LHL  ++ EIATL  RM N FV++ 
Sbjct: 144 QQEDGLLSAPYVIRASICCDCKPGILSDLRQALDALHLIIMKAEIATLEGRMKNVFVMSS 203

Query: 181 CKEGNIKDTEGCQLLASSVRQALRSVLDKFYASEEFSTNPSLSNKRRRVXXXXXXXXXXX 360
           CKEG+  D +  Q LA S+ QA RS+LDKF AS+EF    +LSNKRRRV           
Sbjct: 204 CKEGDSGDAKVHQFLAGSIHQAFRSILDKFSASQEFLLKSTLSNKRRRVDSFKPSLSSSS 263

Query: 361 GELW 372
           G+LW
Sbjct: 264 GDLW 267


>ref|XP_002327321.1| predicted protein [Populus trichocarpa] gi|222835691|gb|EEE74126.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  123 bits (308), Expect = 2e-26
 Identities = 67/123 (54%), Positives = 83/123 (67%)
 Frame = +1

Query: 1   QQEDGSDGASYSIRASLCCEYKHEVLSDLRKALESLHLKTVREEIATLGSRMMNRFVITG 180
           Q+EDG   A   IRAS+CC+YK E+LS LR+AL++LHL   R EIATL  RMMN  V++ 
Sbjct: 144 QEEDGLCSAPCLIRASICCDYKPEILSGLRQALDALHLMITRAEIATLEGRMMNVLVMSS 203

Query: 181 CKEGNIKDTEGCQLLASSVRQALRSVLDKFYASEEFSTNPSLSNKRRRVXXXXXXXXXXX 360
           CKEG   D++  Q LA SV +A RSVL+KF AS+EFS  P+LSNKRRRV           
Sbjct: 204 CKEGLGGDSKVRQFLAGSVHKAFRSVLEKFSASQEFSLKPTLSNKRRRVGLLQPFSSSSS 263

Query: 361 GEL 369
           G+L
Sbjct: 264 GDL 266


Top