BLASTX nr result

ID: Panax21_contig00018363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018363
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313608.1| predicted protein [Populus trichocarpa] gi|2...    76   1e-11
ref|XP_002273209.1| PREDICTED: uncharacterized protein LOC100246...    70   1e-09

>ref|XP_002313608.1| predicted protein [Populus trichocarpa] gi|222850016|gb|EEE87563.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 62/175 (35%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
 Frame = -2

Query: 477 MTRILVQRXXXXXXXSTN--------RPDRSGXXXXXXXXXPVITSEGEIVEEVQEKDLV 322
           MTRILVQR        +         RPD  G              + EI EEVQE+ +V
Sbjct: 1   MTRILVQRGSGSSSNQSRAGSSSSVARPDTQGTSIPQSAST---VRDEEIGEEVQEQVVV 57

Query: 321 DEFSGNSGSLDSKVLQGDDDILVQSDNPD------DEIVASEKVGENDVLDTGDLTKGFG 160
           DE   NSG+ D+KV++  D++L  S N D      D+IV +EKVG ++ + +GDL KG  
Sbjct: 58  DEVLENSGNNDNKVVK-SDELLTVSINDDRIESLNDDIVDNEKVGNDEGVGSGDLVKGLS 116

Query: 159 GLSIVEE--ENEGLSGCSFHTGTGTSYXXXXXXXXXXPSSGNLNPRRFISGSTNA 1
           GL +     E+EG S      G G+            P+  N N RRF+SG++N+
Sbjct: 117 GLILERSLVESEGSSAGYPEVGCGSPQPPPPPVPPPKPALTNSNSRRFMSGASNS 171


>ref|XP_002273209.1| PREDICTED: uncharacterized protein LOC100246727 [Vitis vinifera]
          Length = 528

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 57/167 (34%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
 Frame = -2

Query: 477 MTRILVQRXXXXXXXSTNRPDRSGXXXXXXXXXPVITS---EGEIVEEVQEKDLVDEFSG 307
           MTRILVQR        T+    S            + S   + E+ EEVQE+ +VD+   
Sbjct: 1   MTRILVQRGSGSNPNRTSSLPSSSLAPSQPQAATQVPSTVKDEEVGEEVQEQTIVDD--- 57

Query: 306 NSGSLDSKVLQGDDDIL--VQSDNPDDEIVASEKVGENDVLDTGDLTKGFGGLSIVEE-- 139
              + ++KV + DD +   V++DN +D+ V  EK+  +DVL +GDL + FGGL I E+  
Sbjct: 58  TLETCENKVTKTDDLLQESVRNDNANDDNVDGEKIVNDDVLGSGDLDQEFGGLRINEKLA 117

Query: 138 -ENEGLSGCSFHTGTGTSYXXXXXXXXXXPSSGNLNPRRFISGSTNA 1
            ENEG S  S      +SY            + N NP RF S  +N+
Sbjct: 118 VENEGSSADSSQIVNRSSYPPPPPVPPPKHWATNSNPMRFGSDGSNS 164


Top