BLASTX nr result

ID: Panax21_contig00018356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018356
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...    77   2e-12
ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...    77   2e-12
emb|CBI38762.3| unnamed protein product [Vitis vinifera]               77   2e-12
emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]    77   2e-12
ref|XP_002301335.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-09

>ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
           [Vitis vinifera]
          Length = 365

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/50 (70%), Positives = 43/50 (86%)
 Frame = -2

Query: 551 KDDIDRLSKYKFKRIGDFEKQNGEIQ*SFSGIMTECNTDTPIEMVLPPED 402
           K++I+RL KYKF+RIG+ EK NGEIQ SF GIMTEC+TDTP+E V+P ED
Sbjct: 257 KEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQED 306


>ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
           [Vitis vinifera]
          Length = 382

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/50 (70%), Positives = 43/50 (86%)
 Frame = -2

Query: 551 KDDIDRLSKYKFKRIGDFEKQNGEIQ*SFSGIMTECNTDTPIEMVLPPED 402
           K++I+RL KYKF+RIG+ EK NGEIQ SF GIMTEC+TDTP+E V+P ED
Sbjct: 274 KEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQED 323


>emb|CBI38762.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/50 (70%), Positives = 43/50 (86%)
 Frame = -2

Query: 551 KDDIDRLSKYKFKRIGDFEKQNGEIQ*SFSGIMTECNTDTPIEMVLPPED 402
           K++I+RL KYKF+RIG+ EK NGEIQ SF GIMTEC+TDTP+E V+P ED
Sbjct: 221 KEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQED 270


>emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]
          Length = 342

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/50 (70%), Positives = 43/50 (86%)
 Frame = -2

Query: 551 KDDIDRLSKYKFKRIGDFEKQNGEIQ*SFSGIMTECNTDTPIEMVLPPED 402
           K++I+RL KYKF+RIG+ EK NGEIQ SF GIMTEC+TDTP+E V+P ED
Sbjct: 234 KEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQED 283


>ref|XP_002301335.1| predicted protein [Populus trichocarpa] gi|222843061|gb|EEE80608.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = -2

Query: 551 KDDIDRLSKYKFKRIGDFEKQNGEIQ*SFSGIMTECNTDTPIEMVLPPED 402
           K++IDRL KYKF RIG+ EK N E Q SF G+MTEC+TDTPIE  L  ED
Sbjct: 270 KEEIDRLLKYKFHRIGNCEKVNDESQESFGGMMTECDTDTPIERALSRED 319


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