BLASTX nr result

ID: Panax21_contig00018353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018353
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vi...   206   9e-51
emb|CBI15506.3| unnamed protein product [Vitis vinifera]              206   9e-51
ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus ...   205   2e-50
ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine ...   202   2e-49
ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vi...   200   6e-49

>ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 757

 Score =  206 bits (524), Expect = 9e-51
 Identities = 111/180 (61%), Positives = 122/180 (67%), Gaps = 1/180 (0%)
 Frame = -2

Query: 538 MGSYGFNNQNNA-HYLGITEPISLGGPTDYDVIKTCELEKFLADAGLYESHEEAIRREEV 362
           M + G NN+NN+   LGITEPISLGGP + DV KT ELEKFLA AGLYES EEA+ REEV
Sbjct: 1   MSNLGLNNRNNSGQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEV 60

Query: 361 LGRLDQTVKKWVKSISRAKGLNEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           LGRLDQ VK WVK+ISRAKGLNEQ                                    
Sbjct: 61  LGRLDQIVKIWVKAISRAKGLNEQ---------------------LVQEANAKIFTFGSY 99

Query: 181 XXXXXGPGADIDTLCVGPRHAARDEDFFGELQKMLSEMPEVTELHPIPDAHVPVLKFKFN 2
                GPGADIDTLCVGPRHA R+EDFFGEL KMLSEMPEVTELHP+PDAHVPV++FKF+
Sbjct: 100 RLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVPDAHVPVMRFKFS 159


>emb|CBI15506.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  206 bits (524), Expect = 9e-51
 Identities = 111/180 (61%), Positives = 122/180 (67%), Gaps = 1/180 (0%)
 Frame = -2

Query: 538 MGSYGFNNQNNA-HYLGITEPISLGGPTDYDVIKTCELEKFLADAGLYESHEEAIRREEV 362
           M + G NN+NN+   LGITEPISLGGP + DV KT ELEKFLA AGLYES EEA+ REEV
Sbjct: 1   MSNLGLNNRNNSGQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEV 60

Query: 361 LGRLDQTVKKWVKSISRAKGLNEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           LGRLDQ VK WVK+ISRAKGLNEQ                                    
Sbjct: 61  LGRLDQIVKIWVKAISRAKGLNEQ---------------------LVQEANAKIFTFGSY 99

Query: 181 XXXXXGPGADIDTLCVGPRHAARDEDFFGELQKMLSEMPEVTELHPIPDAHVPVLKFKFN 2
                GPGADIDTLCVGPRHA R+EDFFGEL KMLSEMPEVTELHP+PDAHVPV++FKF+
Sbjct: 100 RLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVPDAHVPVMRFKFS 159


>ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
           gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha,
           putative [Ricinus communis]
          Length = 770

 Score =  205 bits (521), Expect = 2e-50
 Identities = 110/181 (60%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
 Frame = -2

Query: 538 MGSYGFNNQNNAHY---LGITEPISLGGPTDYDVIKTCELEKFLADAGLYESHEEAIRRE 368
           MGS G + +NN      LGIT+PISLGGPT+YD+IK+ ELEKFL D GLYES EE++ RE
Sbjct: 1   MGSPGLSTRNNGQQQLRLGITDPISLGGPTEYDLIKSRELEKFLQDMGLYESREESVSRE 60

Query: 367 EVLGRLDQTVKKWVKSISRAKGLNEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
           EVLGRLDQ VK WVK ISRAKGLNEQ                                  
Sbjct: 61  EVLGRLDQIVKHWVKVISRAKGLNEQ---------------------LVQEANAKIFTFG 99

Query: 187 XXXXXXXGPGADIDTLCVGPRHAARDEDFFGELQKMLSEMPEVTELHPIPDAHVPVLKFK 8
                  GPGADIDTLCVGPRHA R+EDFFGEL +MLSEMPEVTELHP+PDAHVPVLKFK
Sbjct: 100 SYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRMLSEMPEVTELHPVPDAHVPVLKFK 159

Query: 7   F 5
           F
Sbjct: 160 F 160


>ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 757

 Score =  202 bits (513), Expect = 2e-49
 Identities = 111/180 (61%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
 Frame = -2

Query: 538 MGSYGFNNQNNAHY-LGITEPISLGGPTDYDVIKTCELEKFLADAGLYESHEEAIRREEV 362
           MG  G +NQNN    LGITEPISL GPTD D IKT ELEK+L   GLYES EEA+ REEV
Sbjct: 1   MGIPGLSNQNNGQQRLGITEPISLAGPTDDDAIKTLELEKYLQGVGLYESQEEAVVREEV 60

Query: 361 LGRLDQTVKKWVKSISRAKGLNEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           LGRLDQ VK WVK+ISRAKG NEQ                                    
Sbjct: 61  LGRLDQIVKIWVKNISRAKGFNEQ---------------------LVHEANAKIFTSGSY 99

Query: 181 XXXXXGPGADIDTLCVGPRHAARDEDFFGELQKMLSEMPEVTELHPIPDAHVPVLKFKFN 2
                GPGADIDTLCVGPRHA+RDEDFFG LQKMLSEM EVTELHP+PDAHVPV+KFKFN
Sbjct: 100 RLGVHGPGADIDTLCVGPRHASRDEDFFGGLQKMLSEMQEVTELHPVPDAHVPVVKFKFN 159


>ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 587

 Score =  200 bits (508), Expect = 6e-49
 Identities = 104/179 (58%), Positives = 119/179 (66%)
 Frame = -2

Query: 538 MGSYGFNNQNNAHYLGITEPISLGGPTDYDVIKTCELEKFLADAGLYESHEEAIRREEVL 359
           M S   +NQ N   LG++EPIS  GPT++D+IKT ELEKFLAD+GLYE+ EEAIRREEVL
Sbjct: 1   MASVSASNQVNTLCLGVSEPISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVL 60

Query: 358 GRLDQTVKKWVKSISRAKGLNEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 179
           GR+DQ VK WVK++SRAKG NEQ                                     
Sbjct: 61  GRVDQIVKVWVKTVSRAKGFNEQ---------------------LVHEANAKIFTFGSYR 99

Query: 178 XXXXGPGADIDTLCVGPRHAARDEDFFGELQKMLSEMPEVTELHPIPDAHVPVLKFKFN 2
               GPGADIDTLCVGPRHA RDEDFFGEL +ML+E PEV ELHP+PDAHVPV+KFKFN
Sbjct: 100 LGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLAETPEVQELHPVPDAHVPVMKFKFN 158


Top