BLASTX nr result

ID: Panax21_contig00018322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018322
         (1409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus ...   110   1e-21
ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis...   108   3e-21
ref|XP_003550702.1| PREDICTED: histone deacetylase 5-like [Glyci...   107   8e-21
ref|XP_003524633.1| PREDICTED: histone deacetylase 5-like [Glyci...   107   8e-21
ref|XP_004172668.1| PREDICTED: histone deacetylase 5-like, parti...   105   2e-20

>ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis]
            gi|223546264|gb|EEF47766.1| histone deacetylase hda1,
            putative [Ricinus communis]
          Length = 654

 Score =  110 bits (274), Expect = 1e-21
 Identities = 48/56 (85%), Positives = 53/56 (94%)
 Frame = -1

Query: 1406 HTMTGEGQGAGYNINVPWENGRCGDADYLAVWEHILIHIAKEYNPDLIIISAGFDA 1239
            +TM GEG GAGYNINVPWENGRCGDADYLAVW+HILI +AKE+NPD+IIISAGFDA
Sbjct: 225  YTMIGEGPGAGYNINVPWENGRCGDADYLAVWDHILIPVAKEFNPDMIIISAGFDA 280


>ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera]
            gi|297733877|emb|CBI15124.3| unnamed protein product
            [Vitis vinifera]
          Length = 646

 Score =  108 bits (271), Expect = 3e-21
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = -1

Query: 1406 HTMTGEGQGAGYNINVPWENGRCGDADYLAVWEHILIHIAKEYNPDLIIISAGFDA 1239
            + MTGEG GAGYNINVPWENGRCGDADYLAVW+HILI +AK++NPD++IISAGFDA
Sbjct: 222  YAMTGEGPGAGYNINVPWENGRCGDADYLAVWDHILIPVAKDFNPDIVIISAGFDA 277


>ref|XP_003550702.1| PREDICTED: histone deacetylase 5-like [Glycine max]
          Length = 652

 Score =  107 bits (267), Expect = 8e-21
 Identities = 45/56 (80%), Positives = 52/56 (92%)
 Frame = -1

Query: 1406 HTMTGEGQGAGYNINVPWENGRCGDADYLAVWEHILIHIAKEYNPDLIIISAGFDA 1239
            +TM GEG GAGYNINVPWENGRCGDADY AVW+HIL+ +AKE+NPD+II+SAGFDA
Sbjct: 225  YTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDA 280


>ref|XP_003524633.1| PREDICTED: histone deacetylase 5-like [Glycine max]
          Length = 656

 Score =  107 bits (267), Expect = 8e-21
 Identities = 45/56 (80%), Positives = 52/56 (92%)
 Frame = -1

Query: 1406 HTMTGEGQGAGYNINVPWENGRCGDADYLAVWEHILIHIAKEYNPDLIIISAGFDA 1239
            +TM GEG GAGYNINVPWENGRCGDADY AVW+HIL+ +AKE+NPD+II+SAGFDA
Sbjct: 229  YTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDA 284


>ref|XP_004172668.1| PREDICTED: histone deacetylase 5-like, partial [Cucumis sativus]
          Length = 365

 Score =  105 bits (263), Expect = 2e-20
 Identities = 44/56 (78%), Positives = 52/56 (92%)
 Frame = -1

Query: 1406 HTMTGEGQGAGYNINVPWENGRCGDADYLAVWEHILIHIAKEYNPDLIIISAGFDA 1239
            +T  GEG GAGYNINVPWENGRCGDADYLAVW+HIL+ +A+EYNPD+I++SAGFDA
Sbjct: 231  YTKVGEGPGAGYNINVPWENGRCGDADYLAVWDHILLPVAEEYNPDMIMVSAGFDA 286


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