BLASTX nr result

ID: Panax21_contig00018270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018270
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun...   512   e-143
ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer...   504   e-140
emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]   504   e-140
ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidop...   478   e-132
ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|2...   476   e-132

>ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 492

 Score =  512 bits (1318), Expect = e-143
 Identities = 246/364 (67%), Positives = 302/364 (82%), Gaps = 1/364 (0%)
 Frame = -2

Query: 1089 IELERSRSLIKFMNDEGLVPSSEEETKRKTIINDLKQIVMKWIKRVGYQRHLSRSYIRAA 910
            +E ERS SL+KFM +EGLVPS  EE KRK +I +LKQIV+ W K+V +QR L R  I + 
Sbjct: 1    MEEERSLSLLKFMANEGLVPSPREEEKRKNVILNLKQIVVAWAKKVAWQRRLPRLQIAST 60

Query: 909  SATILTYGSYGLGVHTSESDIDALCVGPCFANIEEDFFMVLHDMLASMTEISDIHCVKDA 730
            +ATILTYGSYGLGV+  ESDIDA+CVGP FA + EDFF+VL +ML +  E+S+IHCVKDA
Sbjct: 61   NATILTYGSYGLGVYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDA 120

Query: 729  KVPLMRFKFDGIAVDLPYAQLQVPSVPENVDILNPFFLKNINESSWRSLSGVRANRSILQ 550
            KVPLMRFKFDGI++DLPYAQL+V +VP+NVD+LNPFFL NI+E+SW+SLSGVRAN+ ILQ
Sbjct: 121  KVPLMRFKFDGISIDLPYAQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQ 180

Query: 549  LVPNVTIFKAVLRCVKLWAKRRGVYGNLFGFFGGVHLAVLAAFICLRHPYASLAALISIF 370
             VPN+  F+++LRC+KLWA+RRGV GNL GF GGVHLA+L+A +C ++P AS++ALIS F
Sbjct: 181  FVPNLENFQSMLRCIKLWARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNF 240

Query: 369  FHVFVHWEWPTPVILHNGFIS-STIRSEIRSFMPIQLPCSPHEFCHSNITRSTFSKIKAE 193
            F  +  W WPTPV+L +G  S +    E RSFMPI+LPCSPHE+CHSNIT+ST+ +I+ E
Sbjct: 241  FATYATWPWPTPVMLQDGMSSPAEDFIETRSFMPIRLPCSPHEYCHSNITKSTYYRIRTE 300

Query: 192  FLRGHYLTKDILKPDFDWSSIFEQFPYSKRYTRFVKICLSASDQEGLGDWVGWVKSRFRC 13
            FLRGH LTKD+LKPDFDW+ IFE FPYSK+YTRFVKI LSA DQ+ +GDWVGWVKSRFR 
Sbjct: 301  FLRGHSLTKDLLKPDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWVKSRFRA 360

Query: 12   LLLK 1
            LLLK
Sbjct: 361  LLLK 364


>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
            gi|296083219|emb|CBI22855.3| unnamed protein product
            [Vitis vinifera]
          Length = 563

 Score =  504 bits (1297), Expect = e-140
 Identities = 238/366 (65%), Positives = 298/366 (81%)
 Frame = -2

Query: 1098 LARIELERSRSLIKFMNDEGLVPSSEEETKRKTIINDLKQIVMKWIKRVGYQRHLSRSYI 919
            L R+E  RS SL++FM++EGL+PS EEE KRK +I  LK+IV+ W+KRV +QR   +  I
Sbjct: 68   LVRMEHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQI 127

Query: 918  RAASATILTYGSYGLGVHTSESDIDALCVGPCFANIEEDFFMVLHDMLASMTEISDIHCV 739
               SATILTYGSYGLGVH  ESDIDALCVGP FA++ +DFF+VL +ML S  E+S+IHCV
Sbjct: 128  AVTSATILTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCV 187

Query: 738  KDAKVPLMRFKFDGIAVDLPYAQLQVPSVPENVDILNPFFLKNINESSWRSLSGVRANRS 559
            KDAKVPLMRFKFDGI+VDLPYAQL++  VPEN+++LNP+FL+NI+E+SW+SLSGVRAN  
Sbjct: 188  KDAKVPLMRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANEC 247

Query: 558  ILQLVPNVTIFKAVLRCVKLWAKRRGVYGNLFGFFGGVHLAVLAAFICLRHPYASLAALI 379
            ILQLVPNV  F+++LRC+KLWAKRRGVYGNLFG+FGGVHLA+LAAF+C ++P+A+L  L+
Sbjct: 248  ILQLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLM 307

Query: 378  SIFFHVFVHWEWPTPVILHNGFISSTIRSEIRSFMPIQLPCSPHEFCHSNITRSTFSKIK 199
            S FF  F  W WPTPV L +G + +    E R+ MPIQLPCSP+ +CHSNIT+STF +I 
Sbjct: 308  SSFFKTFSGWPWPTPVALEDGRLPTGGTRETRALMPIQLPCSPYGYCHSNITKSTFYRIT 367

Query: 198  AEFLRGHYLTKDILKPDFDWSSIFEQFPYSKRYTRFVKICLSASDQEGLGDWVGWVKSRF 19
             E   GH LT+D+L+ DFDW+ IFE F YSK+Y+RF+KI LS+S+Q+ LGDWVGWVKSRF
Sbjct: 368  TELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRF 427

Query: 18   RCLLLK 1
            R LL K
Sbjct: 428  RFLLAK 433


>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
          Length = 604

 Score =  504 bits (1297), Expect = e-140
 Identities = 238/366 (65%), Positives = 298/366 (81%)
 Frame = -2

Query: 1098 LARIELERSRSLIKFMNDEGLVPSSEEETKRKTIINDLKQIVMKWIKRVGYQRHLSRSYI 919
            L R+E  RS SL++FM++EGL+PS EEE KRK +I  LK+IV+ W+KRV +QR   +  I
Sbjct: 109  LVRMEHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQI 168

Query: 918  RAASATILTYGSYGLGVHTSESDIDALCVGPCFANIEEDFFMVLHDMLASMTEISDIHCV 739
               SATILTYGSYGLGVH  ESDIDALCVGP FA++ +DFF+VL +ML S  E+S+IHCV
Sbjct: 169  AVTSATILTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCV 228

Query: 738  KDAKVPLMRFKFDGIAVDLPYAQLQVPSVPENVDILNPFFLKNINESSWRSLSGVRANRS 559
            KDAKVPLMRFKFDGI+VDLPYAQL++  VPEN+++LNP+FL+NI+E+SW+SLSGVRAN  
Sbjct: 229  KDAKVPLMRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANEC 288

Query: 558  ILQLVPNVTIFKAVLRCVKLWAKRRGVYGNLFGFFGGVHLAVLAAFICLRHPYASLAALI 379
            ILQLVPNV  F+++LRC+KLWAKRRGVYGNLFG+FGGVHLA+LAAF+C ++P+A+L  L+
Sbjct: 289  ILQLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLM 348

Query: 378  SIFFHVFVHWEWPTPVILHNGFISSTIRSEIRSFMPIQLPCSPHEFCHSNITRSTFSKIK 199
            S FF  F  W WPTPV L +G + +    E R+ MPIQLPCSP+ +CHSNIT+STF +I 
Sbjct: 349  SSFFKTFSGWPWPTPVALEDGRLPTGGTRETRALMPIQLPCSPYGYCHSNITKSTFYRIT 408

Query: 198  AEFLRGHYLTKDILKPDFDWSSIFEQFPYSKRYTRFVKICLSASDQEGLGDWVGWVKSRF 19
             E   GH LT+D+L+ DFDW+ IFE F YSK+Y+RF+KI LS+S+Q+ LGDWVGWVKSRF
Sbjct: 409  TELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRF 468

Query: 18   RCLLLK 1
            R LL K
Sbjct: 469  RFLLAK 474


>ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
            gi|297328320|gb|EFH58739.1| polynucleotide
            adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score =  478 bits (1230), Expect = e-132
 Identities = 226/358 (63%), Positives = 287/358 (80%)
 Frame = -2

Query: 1074 SRSLIKFMNDEGLVPSSEEETKRKTIINDLKQIVMKWIKRVGYQRHLSRSYIRAASATIL 895
            S SL + M +EGL+PS E++ KR+ +IN L++IV++W+K V +Q  L ++ I A +ATIL
Sbjct: 20   SISLRQLMVNEGLIPSLEDQEKRRVVINKLRKIVVRWVKNVAWQHRLPQNQIDATNATIL 79

Query: 894  TYGSYGLGVHTSESDIDALCVGPCFANIEEDFFMVLHDMLASMTEISDIHCVKDAKVPLM 715
             YGSYGLGV+ SESDIDALC+GP FA+I EDFF+ L DML S  E+S++HCVKDAKVPL+
Sbjct: 80   PYGSYGLGVYGSESDIDALCIGPFFASISEDFFISLRDMLKSRREVSEVHCVKDAKVPLI 139

Query: 714  RFKFDGIAVDLPYAQLQVPSVPENVDILNPFFLKNINESSWRSLSGVRANRSILQLVPNV 535
            RFKFDGI VDLPYAQL+V S+P NVD+LNPFFL++I+E+SW+SLSGVRAN+ ILQLVP++
Sbjct: 140  RFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSL 199

Query: 534  TIFKAVLRCVKLWAKRRGVYGNLFGFFGGVHLAVLAAFICLRHPYASLAALISIFFHVFV 355
             +F+++LRCVKLWAKRRGVYGNL GF GGVH+A+LAAF+C     A+L++L++ FF++F 
Sbjct: 200  ELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYESNATLSSLLANFFYIFA 259

Query: 354  HWEWPTPVILHNGFISSTIRSEIRSFMPIQLPCSPHEFCHSNITRSTFSKIKAEFLRGHY 175
            HW+WPTPV+L      +T        MPIQLPC  H++C+SNITRSTF KI AEFLRGH 
Sbjct: 260  HWQWPTPVVLLEDTYPAT--GAPPGLMPIQLPCGSHQYCNSNITRSTFYKIMAEFLRGHN 317

Query: 174  LTKDILKPDFDWSSIFEQFPYSKRYTRFVKICLSASDQEGLGDWVGWVKSRFRCLLLK 1
            LTKD LKP+F W ++FE +PY   YT F KI LSA++QE L DWVGWVKSRFRCLL K
Sbjct: 318  LTKDYLKPNFSWKNLFELYPYENTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLSK 375


>ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|222851196|gb|EEE88743.1|
            predicted protein [Populus trichocarpa]
          Length = 483

 Score =  476 bits (1225), Expect = e-132
 Identities = 239/355 (67%), Positives = 282/355 (79%), Gaps = 4/355 (1%)
 Frame = -2

Query: 1053 MNDEGLVPSSEEETKRKTIINDLKQIVMKWIKRVGYQRHLSRSYIRAASATILTYGSYGL 874
            M +EGL PS EE+ KRK I+  LK IV+ W K+V +QR L +  I A SATILTYGSYGL
Sbjct: 1    MVNEGLFPSPEEDEKRKIIVEKLKTIVVAWAKKVAWQRCLPKQQIAATSATILTYGSYGL 60

Query: 873  GVHTSESDIDALCVGPCFANIEEDFFMVLHDMLASMTEISDIHCVKDAKVPLMRFKFDGI 694
            G H  ESDIDALCVGP FA I EDFF+VLH++L S  EIS+IHCVKD+KVPLMRF FDGI
Sbjct: 61   GFHDPESDIDALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDSKVPLMRFTFDGI 120

Query: 693  AVDLPYAQLQVPSVPENVDILNPFFLKNINESSWRSLSGVRANRSILQLVPNVTIFKAVL 514
            +VDLPYAQL+V +VPENVDILN   L NI+E+SW+SLSGVRAN+ IL LVPN+  F+++L
Sbjct: 121  SVDLPYAQLKVLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSML 180

Query: 513  RCVKLWAKRRGVYGNLFGFFGGVHLAVLAAFICLRHPYASLAALISIFFHVFVHWEWPTP 334
            RC+KLWAKRRGVYGNL GF GGVHLAVLAAF+C   P AS+ ALIS FF  +  W WPTP
Sbjct: 181  RCLKLWAKRRGVYGNLNGFLGGVHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPTP 240

Query: 333  VILHNGFISSTIRS--EIRSFMPIQLPCSPHEFCHSNITRSTFSKIKAEFLRGHYLTKDI 160
            V+L +G +SS +    E R +MPI+LPCSP+E+CHSN+T+STF+KI+AEFLRGH +T+D+
Sbjct: 241  VMLQDG-MSSNVEDVIETRFYMPIRLPCSPYEYCHSNVTKSTFTKIRAEFLRGHSMTRDL 299

Query: 159  --LKPDFDWSSIFEQFPYSKRYTRFVKICLSASDQEGLGDWVGWVKSRFRCLLLK 1
              LK D D   IFE FPYS  YTRFVKI LSA DQ+ LGDWVGWVKS FRCLLLK
Sbjct: 300  LKLKLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHFRCLLLK 354


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