BLASTX nr result

ID: Panax21_contig00018259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018259
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arab...    62   5e-08
ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana] ...    61   8e-08
ref|XP_003525975.1| PREDICTED: rab3 GTPase-activating protein no...    59   4e-07
ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein no...    58   9e-07

>ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arabidopsis lyrata subsp.
           lyrata] gi|297328741|gb|EFH59160.1| hypothetical protein
           ARALYDRAFT_478912 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = +2

Query: 17  REIVYLGQILKLRVCGT*RDLKEDTSSEEVCIVLAGIIVRFSGSHIQVYTLNIQNMFH-- 190
           +++V+  +ILK+RV GT +DL ++TSSEE+CIVL GII RF GS+IQ     +Q  F   
Sbjct: 114 KQMVHPSRILKIRVRGTKKDLMQETSSEEICIVLPGIIARFDGSNIQSM---LQKWFQEK 170

Query: 191 RNNFW 205
            +NFW
Sbjct: 171 NSNFW 175


>ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8777474|dbj|BAA97054.1| unnamed protein product
           [Arabidopsis thaliana] gi|63147384|gb|AAY34165.1|
           At3g14910 [Arabidopsis thaliana]
           gi|115646783|gb|ABJ17116.1| At3g14910 [Arabidopsis
           thaliana] gi|332642066|gb|AEE75587.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 455

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = +2

Query: 17  REIVYLGQILKLRVCGT*RDLKEDTSSEEVCIVLAGIIVRFSGSHIQVYTLN-IQNMFHR 193
           ++IV+  +ILK+RV GT +DL ++TSSEE+CIVL G+I RF GS+IQ      +Q     
Sbjct: 114 KQIVHQSRILKIRVRGTKKDLMQETSSEEICIVLPGVIARFDGSNIQSMVQKWVQE--KN 171

Query: 194 NNFW 205
           +NFW
Sbjct: 172 SNFW 175


>ref|XP_003525975.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
           subunit-like [Glycine max]
          Length = 460

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/47 (55%), Positives = 38/47 (80%)
 Frame = +2

Query: 17  REIVYLGQILKLRVCGT*RDLKEDTSSEEVCIVLAGIIVRFSGSHIQ 157
           R+++Y  ++LKLRV GT +DL +DTSSEE C++++G+I RF GS IQ
Sbjct: 118 RQMIYPERVLKLRVRGTKKDLIQDTSSEEFCLIMSGVIARFDGSDIQ 164


>ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
           subunit-like [Glycine max]
          Length = 459

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/47 (53%), Positives = 37/47 (78%)
 Frame = +2

Query: 17  REIVYLGQILKLRVCGT*RDLKEDTSSEEVCIVLAGIIVRFSGSHIQ 157
           R+++Y  ++LKLRV GT +DL +DTSSEE C++++G+I  F GS IQ
Sbjct: 117 RQMIYPSRVLKLRVRGTKKDLIQDTSSEEFCLIMSGVIAHFDGSDIQ 163


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