BLASTX nr result

ID: Panax21_contig00018255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018255
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ16351.1| cytokinesis negative regulator RCP1 [Nicotiana ta...   116   8e-24
ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    92   2e-16
ref|XP_003532889.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...    64   4e-08
ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cuc...    61   3e-07
ref|XP_004135900.1| PREDICTED: uncharacterized protein LOC101219...    61   3e-07

>gb|ABJ16351.1| cytokinesis negative regulator RCP1 [Nicotiana tabacum]
          Length = 302

 Score =  116 bits (290), Expect = 8e-24
 Identities = 71/142 (50%), Positives = 86/142 (60%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1   CILPWLKTHNSCPVCRFTMPTESDGGFKGRRMRERVMNA-RLGELMGEEE-FSGFGSTLR 174
           CILPWL+ +NSCPVCRF +PTE +   +  R RER + A RLGE++ EEE   GF  TLR
Sbjct: 173 CILPWLEVNNSCPVCRFKLPTEEEDDEECIRRRERFLGAMRLGEILAEEEDLFGFRRTLR 232

Query: 175 HIARRHRLVFPVSRRENRVEMVEGDGGESLLLSPTRVAEADMGVLARENSVETVSSGWPS 354
            +ARRH+L                DGGES +      A   +GV+AR NSVETVSS WPS
Sbjct: 233 RVARRHQL----------------DGGESTI----GQAGQGVGVVARANSVETVSS-WPS 271

Query: 355 WPMEEGGD-DEIGMSGRANDGG 417
           WP+E G D DE+G S     GG
Sbjct: 272 WPVENGSDGDEVGGSDNRLGGG 293


>ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 312

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 61/150 (40%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
 Frame = +1

Query: 1   CILPWLKTHNSCPVCRFTMPTES--DGGFKGRRMRERVMNARLGELMGEEEFSGFGSTLR 174
           CILPWL   NSCP+CRF +PT+   D G  G       +    G+LM + E  G GSTLR
Sbjct: 175 CILPWLSQQNSCPLCRFRLPTDEGEDSGDAGA-----TVTMTFGDLMEDHELFGLGSTLR 229

Query: 175 HIARRHRLVFPVSRRENRVEMVEGDGGESLLLSPTRVAEADMGVLARENSVETVSSGWPS 354
           HIARR+RLVFP                    LS    A+A    L  +NSVETVSS WP 
Sbjct: 230 HIARRNRLVFPA-------------------LSAEGQAQAQGESLGPDNSVETVSS-WPR 269

Query: 355 WPM-----EEGGDDEIGMSGRANDGGDIIM 429
             +       GGD + G    AN+  D +M
Sbjct: 270 QVLVGGGGGGGGDADFGAGAVANEDADAMM 299


>ref|XP_003532889.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max]
          Length = 207

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = +1

Query: 1   CILPWLKTHNSCPVCRFTMPTESDGGFKGRRMR-ERVMNARLGELMGEEEFSGFGSTLRH 177
           CI PWL+ H SCP+CRF +  E + G  G   +  R + ARL  ++ EE+F G  +TL H
Sbjct: 121 CITPWLELHASCPLCRFRLEEEEEEGGDGVMTKIRREIIARL-TVLTEEDFYGLRTTLNH 179

Query: 178 IARRHRLVFPVSRRENR-VEMVEGDGGES 261
           IA RH L   +   ENR  ++ E  GG+S
Sbjct: 180 IASRHAL---IQENENRGAQIGETQGGDS 205


>ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cucumis sativus]
          Length = 333

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 42/114 (36%), Positives = 61/114 (53%)
 Frame = +1

Query: 1   CILPWLKTHNSCPVCRFTMPTESDGGFKGRRMRERVMNARLGELMGEEEFSGFGSTLRHI 180
           CILPWL  H+SCP+CRF +P++ D   + R     ++ AR  +LM +E+  G  +TL  +
Sbjct: 188 CILPWLSNHDSCPLCRFKLPSD-DPSDRVRCRTSALLRAR--DLMHQEDSYGLRTTLELM 244

Query: 181 ARRHRLVFPVSRRENRVEMVEGDGGESLLLSPTRVAEADMGVLARENSVETVSS 342
           ARRH     +S     V+  +         SPT+   A M    + +SVETVSS
Sbjct: 245 ARRHS---SISSEGIHVDSFQ---------SPTQFGVAMMESGEQTDSVETVSS 286


>ref|XP_004135900.1| PREDICTED: uncharacterized protein LOC101219937 [Cucumis sativus]
          Length = 334

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 42/114 (36%), Positives = 61/114 (53%)
 Frame = +1

Query: 1   CILPWLKTHNSCPVCRFTMPTESDGGFKGRRMRERVMNARLGELMGEEEFSGFGSTLRHI 180
           CILPWL  H+SCP+CRF +P++ D   + R     ++ AR  +LM +E+  G  +TL  +
Sbjct: 189 CILPWLSNHDSCPLCRFKLPSD-DPSDRVRCRTSALLRAR--DLMHQEDSYGLRTTLELM 245

Query: 181 ARRHRLVFPVSRRENRVEMVEGDGGESLLLSPTRVAEADMGVLARENSVETVSS 342
           ARRH     +S     V+  +         SPT+   A M    + +SVETVSS
Sbjct: 246 ARRHS---SISSEGIHVDSFQ---------SPTQFGVAMMESGEQTDSVETVSS 287


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