BLASTX nr result

ID: Panax21_contig00018237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018237
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    77   2e-12
ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...    76   2e-12
gb|ADE76547.1| unknown [Picea sitchensis]                              76   2e-12
emb|CBI23791.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Sela...    76   3e-12

>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = +2

Query: 2   CHTAIKFISKLYGREIIVRDVNRFHNFKDGSCSCGDYW 115
           CHTA KFISK+  REIIVRD+NRFH+F+DGSCSCGDYW
Sbjct: 826 CHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863


>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +2

Query: 2   CHTAIKFISKLYGREIIVRDVNRFHNFKDGSCSCGDYW 115
           CH A KFISK+Y REIIVRD+NRFH FKDGSCSCGDYW
Sbjct: 652 CHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689


>gb|ADE76547.1| unknown [Picea sitchensis]
          Length = 210

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = +2

Query: 2   CHTAIKFISKLYGREIIVRDVNRFHNFKDGSCSCGDYW 115
           CHTA KFISK+ GREI+VRD NRFH+FKDG CSCGDYW
Sbjct: 173 CHTATKFISKIAGREIVVRDANRFHHFKDGLCSCGDYW 210


>emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +2

Query: 2   CHTAIKFISKLYGREIIVRDVNRFHNFKDGSCSCGDYW 115
           CH A KFISK+Y REIIVRD+NRFH FKDGSCSCGDYW
Sbjct: 578 CHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615


>ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
           gi|300157368|gb|EFJ23994.1| hypothetical protein
           SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = +2

Query: 2   CHTAIKFISKLYGREIIVRDVNRFHNFKDGSCSCGDYW 115
           CH A KFISK++GREI+VRDV RFH+FKDG+CSCGDYW
Sbjct: 768 CHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805


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