BLASTX nr result

ID: Panax21_contig00018224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018224
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    80   1e-17
ref|XP_002314910.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-14
emb|CBI27416.3| unnamed protein product [Vitis vinifera]               72   3e-14
ref|XP_002514566.1| conserved hypothetical protein [Ricinus comm...    72   8e-14
ref|XP_002312366.1| predicted protein [Populus trichocarpa] gi|2...    74   7e-11

>ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
            [Vitis vinifera]
          Length = 609

 Score = 80.5 bits (197), Expect(2) = 1e-17
 Identities = 41/76 (53%), Positives = 50/76 (65%)
 Frame = +2

Query: 779  NPMAVCIGDIMESSSSCYPVSMVESCCPAIWDQPTSSQKLAFCDISVQNNTSSSSTLVFR 958
            NPMAVC GD++  SSSC   SMV+S  P +WD P +SQ L FCD++VQNN S+SSTL  R
Sbjct: 84   NPMAVCKGDLV-GSSSCSSASMVDSFGPNLWDHPANSQTLGFCDMNVQNNASTSSTLGIR 142

Query: 959  KASLGPPRTGMDGNFD 1006
            K   G  R  +D   D
Sbjct: 143  KGGPGSLRMDIDKTLD 158



 Score = 36.2 bits (82), Expect(2) = 1e-17
 Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
 Frame = +1

Query: 658 KGDMDMASQDKFGQEKRNEDS--HRILDIFSDWRF 756
           +G+MDM+ +DKF  EKR+ DS  +    + SDWRF
Sbjct: 31  RGEMDMSDKDKFELEKRSGDSLNYHSASMSSDWRF 65


>ref|XP_002314910.1| predicted protein [Populus trichocarpa] gi|222863950|gb|EEF01081.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score = 73.2 bits (178), Expect(2) = 2e-14
 Identities = 35/77 (45%), Positives = 53/77 (68%)
 Frame = +2

Query: 764 LIPHENPMAVCIGDIMESSSSCYPVSMVESCCPAIWDQPTSSQKLAFCDISVQNNTSSSS 943
           L+P +N M+VC GD++  ++SC   S+++S  PA+W+ PT+SQ L FCDI+VQN  SSS+
Sbjct: 45  LVPIDNQMSVCRGDLV-GAASCSSASVIDSFGPAMWEHPTNSQNLVFCDINVQNIASSSN 103

Query: 944 TLVFRKASLGPPRTGMD 994
           T+   K +    R G+D
Sbjct: 104 TVGIGKGAPASLRNGID 120



 Score = 32.7 bits (73), Expect(2) = 2e-14
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +1

Query: 667 MDMASQDKFGQEKRNEDS---HRILDIFSDWRFSSINSP*KSYG 789
           MDM+ +DKF   K N++    H    + SDWRF+S + P  S G
Sbjct: 1   MDMSDKDKFELGKSNDNPINYHSPGGLSSDWRFNSTSIPNSSLG 44


>emb|CBI27416.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score = 72.0 bits (175), Expect(2) = 3e-14
 Identities = 37/72 (51%), Positives = 46/72 (63%)
 Frame = +2

Query: 791  VCIGDIMESSSSCYPVSMVESCCPAIWDQPTSSQKLAFCDISVQNNTSSSSTLVFRKASL 970
            VC GD++  SSSC   SMV+S  P +WD P +SQ L FCD++VQNN S+SSTL  RK   
Sbjct: 35   VCKGDLV-GSSSCSSASMVDSFGPNLWDHPANSQTLGFCDMNVQNNASTSSTLGIRKGGP 93

Query: 971  GPPRTGMDGNFD 1006
            G  R  +D   D
Sbjct: 94   GSLRMDIDKTLD 105



 Score = 33.5 bits (75), Expect(2) = 3e-14
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +1

Query: 667 MDMASQDKFGQEKRNEDS--HRILDIFSDWRFSSI 765
           MDM+ +DKF  EKR+ DS  +    + SDWRF  +
Sbjct: 1   MDMSDKDKFELEKRSGDSLNYHSASMSSDWRFGGV 35


>ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
           gi|223546170|gb|EEF47672.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 566

 Score = 72.0 bits (175), Expect(2) = 8e-14
 Identities = 36/77 (46%), Positives = 50/77 (64%)
 Frame = +2

Query: 764 LIPHENPMAVCIGDIMESSSSCYPVSMVESCCPAIWDQPTSSQKLAFCDISVQNNTSSSS 943
           L+P +N M VC GD++  +SSC   SMV+S  P +WD  T+S  L FCDI+VQN+ S+S+
Sbjct: 45  LVPTDNQMPVCRGDLL-GASSCSTASMVDSFGPGLWDHSTNSLNLGFCDINVQNHPSTSN 103

Query: 944 TLVFRKASLGPPRTGMD 994
           T+  RK+     R G D
Sbjct: 104 TIGHRKSGPTSLRVGTD 120



 Score = 32.0 bits (71), Expect(2) = 8e-14
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +1

Query: 667 MDMASQDKFGQEKRNEDS---HRILDIFSDWRFSSINSP*KSYG 789
           MDM+  DK   EKR ++    H   ++ SDWRF S N    S G
Sbjct: 1   MDMSDMDKLELEKRGDNPINYHSPANMTSDWRFGSSNITNTSLG 44


>ref|XP_002312366.1| predicted protein [Populus trichocarpa] gi|222852186|gb|EEE89733.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +2

Query: 686 INLDKKKGMRILTEYLISSRIGDLAVLIPHENPMAVCIGDIMES-SSSCYPVSMVESCCP 862
           IN     GM +   +  +S       L+P +N M+VC GD+ E+ ++SC   S+++S  P
Sbjct: 19  INYRSPGGMSLDRRFNSTSIPNSSLGLVPTDNQMSVCRGDLAEAVAASCSSASVIDSFGP 78

Query: 863 AIWDQPTSSQKLAFCDISVQNNTSSSSTLVFRKASLGPPRTGMD 994
           A+W+ PT+SQ L FCDI+VQN  SSS+T    K      R G+D
Sbjct: 79  AMWEHPTNSQNLVFCDINVQNIASSSNTAGIGKGFPASLRNGID 122


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