BLASTX nr result

ID: Panax21_contig00018216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018216
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80883.1| hypothetical protein VITISV_018652 [Vitis vinifera]   197   5e-48
ref|XP_002304759.1| predicted protein [Populus trichocarpa] gi|2...   194   3e-47
ref|XP_003546996.1| PREDICTED: uncharacterized protein LOC100814...   174   3e-41
ref|XP_002513456.1| conserved hypothetical protein [Ricinus comm...   171   3e-40
emb|CBI16417.3| unnamed protein product [Vitis vinifera]              170   7e-40

>emb|CAN80883.1| hypothetical protein VITISV_018652 [Vitis vinifera]
          Length = 522

 Score =  197 bits (500), Expect = 5e-48
 Identities = 115/227 (50%), Positives = 149/227 (65%), Gaps = 1/227 (0%)
 Frame = +3

Query: 72  KNDAEPEERRMSNLSDWASSINSSIDIQLQLDNEQDIYNLRKECEEKDNTIKELATFLQS 251
           K +AE EERRMS+LS W SS+ SSI+IQ    +EQDI NL+++CEE+D TIKEL+ F+ S
Sbjct: 206 KMEAEQEERRMSDLS-WISSVTSSIEIQST--SEQDICNLKRQCEERDATIKELSAFVHS 262

Query: 252 SEAISSKRITELEDIIRGKKMIITKLKKDMMILEQKVVHLSRLQRPSFTSSNASARKLPL 431
           S    SKRI+ELEDIIR K   I KLKKD++ LEQKVV LSRL+RPSF++++  +R++PL
Sbjct: 263 SNIAGSKRISELEDIIRRKNSTIIKLKKDLVTLEQKVVQLSRLRRPSFSATSPKSRQIPL 322

Query: 432 MTDNLIY-XXXXXXXXXXXXXXCAPRNKPQAPVAKSQKIPVQKNSSCSSMGDQKLSNAKN 608
           + DNL+Y               CAP N  Q PVAK Q+IP   NS   S   QK + AK 
Sbjct: 323 LADNLLYDMDSTTSPSSSSDSDCAPENSRQPPVAKIQEIPAH-NSDFVSRRIQKSARAKT 381

Query: 609 SNVAVKSSEEHQRSRPGSPLKEKSLNQKSYSESFPRPKQSLSAGGNL 749
           S   V  ++ H +SRP SPL+EK +NQ S + S  +PKQ L   G +
Sbjct: 382 SGSLVMPTDWHTKSRPSSPLQEKMMNQTSDAVSSFKPKQLLPPNGGV 428


>ref|XP_002304759.1| predicted protein [Populus trichocarpa] gi|222842191|gb|EEE79738.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  194 bits (494), Expect = 3e-47
 Identities = 117/245 (47%), Positives = 157/245 (64%), Gaps = 1/245 (0%)
 Frame = +3

Query: 75  NDAEPEERRMSNLSDWASSINSSIDIQLQLDN-EQDIYNLRKECEEKDNTIKELATFLQS 251
           N+ E EERRMS+LSDWASS+ S+ ++Q+     +QD++NL++ECEEKD TIKEL + LQ+
Sbjct: 244 NEVEQEERRMSDLSDWASSVTSAAEMQMNTYAIDQDMFNLKRECEEKDATIKELNSILQT 303

Query: 252 SEAISSKRITELEDIIRGKKMIITKLKKDMMILEQKVVHLSRLQRPSFTSSNASARKLPL 431
           +    SKRI ELEDIIR K  +IT+L+KD+M+LEQKVVHL+RL+RPS +   + + +LPL
Sbjct: 304 NNMADSKRIAELEDIIRRKNTMITRLRKDLMVLEQKVVHLTRLRRPSSSLCVSDSLELPL 363

Query: 432 MTDNLIYXXXXXXXXXXXXXXCAPRNKPQAPVAKSQKIPVQKNSSCSSMGDQKLSNAKNS 611
           M DN+IY               +P N+P+AP A+ Q+ PVQ +S       QK + AK S
Sbjct: 364 MVDNIIYDMDSTTSPSSSDSDSSPANQPRAPAAQIQETPVQ-SSELGLTKSQKSAPAKAS 422

Query: 612 NVAVKSSEEHQRSRPGSPLKEKSLNQKSYSESFPRPKQSLSAGGNLKXXXXXXXXXKDAT 791
           +  V   E H++SR  SPLKE S NQKS      RPKQ LSA    K         KDA+
Sbjct: 423 SSVV---ELHKKSRSESPLKEISTNQKSIGLPSSRPKQ-LSAEIR-KVRRRTQSAIKDAS 477

Query: 792 LQQRW 806
            ++RW
Sbjct: 478 SKKRW 482


>ref|XP_003546996.1| PREDICTED: uncharacterized protein LOC100814573 [Glycine max]
          Length = 454

 Score =  174 bits (442), Expect = 3e-41
 Identities = 115/249 (46%), Positives = 153/249 (61%), Gaps = 5/249 (2%)
 Frame = +3

Query: 75  NDAEPEERRMSNLSDWASSINSSIDIQLQ-LDNEQDIYNLRKECEEKDNTIKELATFLQS 251
           ++ + EERRMS++SDWASS+ SS DIQL  L  EQDIYNLR++CEEKD TIKEL T L S
Sbjct: 212 SNEDQEERRMSDMSDWASSVTSSADIQLNNLAVEQDIYNLRRDCEEKDTTIKELTTLLNS 271

Query: 252 SEAISSKRITELEDIIRGKKMIITKLKKDMMILEQKVVHLSRLQRPSFTSSNASARKLP- 428
           +E    KRI ELEDIIR K   I+KLKKDM++LEQKVV L+RL+RPSF++S ++  +LP 
Sbjct: 272 NEVAKCKRIAELEDIIRRKNTTISKLKKDMLVLEQKVVQLTRLRRPSFSTSGSNDIQLPH 331

Query: 429 LMTDNLIYXXXXXXXXXXXXXXCAPRNKPQAPVAKSQKIP--VQKNSSCSSMGDQKLSNA 602
           +M DNL+Y               +  +   + V K++  P  V  N + +S  +QK S A
Sbjct: 332 IMIDNLLY------DMESTTSPSSSSDSDSSSVIKARDRPADVVLNQNLASKINQKPSPA 385

Query: 603 KNSNVAVKSSEEHQRSRPGSPLKEKSLNQKSYSESFPRPKQSLSAGGNL-KXXXXXXXXX 779
           K S+ + +  E H +S+  SP KE S +QKS + S    K  LSA G+L K         
Sbjct: 386 KVSSSSGRFFECHSKSQSVSPRKELSSSQKSNAASSSAQK-LLSARGDLKKNRRRSLNGD 444

Query: 780 KDATLQQRW 806
           K  T  +RW
Sbjct: 445 KSTTEHKRW 453


>ref|XP_002513456.1| conserved hypothetical protein [Ricinus communis]
            gi|223547364|gb|EEF48859.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 490

 Score =  171 bits (433), Expect = 3e-40
 Identities = 113/276 (40%), Positives = 149/276 (53%), Gaps = 32/276 (11%)
 Frame = +3

Query: 75   NDAEPEERRMSNLSDWASSINSSIDIQLQLDN-EQDIYNLRKECEEKDNTIKELATFLQS 251
            N+ E EERRMS+LSDWASS++S+ DIQ+ +   + DIYNL+KECEEKD TIKEL T LQS
Sbjct: 215  NEVEQEERRMSDLSDWASSVSSTADIQMNMSAVDHDIYNLKKECEEKDATIKELTTVLQS 274

Query: 252  SEAISSKRITELEDIIRGKKMIITKLKKDMMILEQKVVHLSRLQRPSFTSSNASARKLPL 431
                 SKR  ELEDII  K   I KLK+D+++LEQK+VHL+RL+RPS +     + +LPL
Sbjct: 275  KNMAGSKRTAELEDIIHRKNSTIAKLKRDILVLEQKLVHLTRLRRPSSSEYIPESWQLPL 334

Query: 432  MTDNLIYXXXXXXXXXXXXXXCAPRNKPQAPVAKSQKIPVQK--NSSCSSMGD------- 584
            M +N++Y               +P N+  APV K+Q  PVQ   NSS SS  D       
Sbjct: 335  MMENIVYDMDSTTSPSSSDSDSSPVNRSLAPVVKNQAAPVQNSTNSSFSSDTDAPQLNQQ 394

Query: 585  ----------------------QKLSNAKNSNVAVKSSEEHQRSRPGSPLKEKSLNQKSY 698
                                  +K + AK      K +E+  +S P SPLKE S NQ S 
Sbjct: 395  LCHIDRIPETPLHGGYIAPTTHRKSAPAKALVSFAKLTEQKIQSGPVSPLKE-STNQNSG 453

Query: 699  SESFPRPKQSLSAGGNLKXXXXXXXXXKDATLQQRW 806
              S  R KQ  ++G   K          +A  +++W
Sbjct: 454  RVSSLRSKQVSASGEFKKIRRRTQTASNNAAPKKKW 489


>emb|CBI16417.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score =  170 bits (430), Expect = 7e-40
 Identities = 100/197 (50%), Positives = 129/197 (65%), Gaps = 1/197 (0%)
 Frame = +3

Query: 72  KNDAEPEERRMSNLSDWASSINSSIDIQLQLDNEQDIYNLRKECEEKDNTIKELATFLQS 251
           K +AE EERRMS+LS W SS+ SSI+IQ    +EQDI NL+++CEE+D TIKEL+ F+ S
Sbjct: 206 KMEAEQEERRMSDLS-WISSVTSSIEIQST--SEQDICNLKRQCEERDATIKELSAFVHS 262

Query: 252 SEAISSKRITELEDIIRGKKMIITKLKKDMMILEQKVVHLSRLQRPSFTSSNASARKLPL 431
           S    SKRI+ELEDIIR K   I KLKKD++ LEQKVV LSRL+RPSF++++  +R++PL
Sbjct: 263 SNIAGSKRISELEDIIRRKNSTIIKLKKDLVTLEQKVVQLSRLRRPSFSATSPKSRQIPL 322

Query: 432 MTDNLIY-XXXXXXXXXXXXXXCAPRNKPQAPVAKSQKIPVQKNSSCSSMGDQKLSNAKN 608
           + DNL+Y               CAP N  Q PVAK Q+IP   NS   S   QK + AK 
Sbjct: 323 LADNLLYDMDSTTSPSSSSDSDCAPENSRQPPVAKIQEIPAH-NSDFVSRRIQKSARAKT 381

Query: 609 SNVAVKSSEEHQRSRPG 659
           S   V  ++ H +S  G
Sbjct: 382 SGSLVMPTDWHTKSLEG 398


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