BLASTX nr result

ID: Panax21_contig00018204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018204
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|2235...   114   8e-24
ref|XP_002270914.1| PREDICTED: uncharacterized protein At3g61260...   114   1e-23
emb|CAN75437.1| hypothetical protein VITISV_000833 [Vitis vinifera]   114   1e-23
gb|AFK39071.1| unknown [Lotus japonicus]                              110   9e-23
ref|XP_003528866.1| PREDICTED: remorin-like [Glycine max]             110   9e-23

>ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|223549013|gb|EEF50502.1|
           Remorin, putative [Ricinus communis]
          Length = 188

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 10/111 (9%)
 Frame = +1

Query: 148 ISTEQTQIVEMESPTVPAPEKLIRPV------IPPA----DDSKSLAVVEKTPDPVAKTT 297
           ++ ++ + +E ESP  PAP +    V      +P      DDSK+LAVVEK P+   K T
Sbjct: 1   MAEQEAKKLEAESPVAPAPAEAKSDVAHDKATVPTPEEKPDDSKALAVVEKVPESGPKKT 60

Query: 298 SKGSIDRDVALAEVEKEKRLSFVKAWEESEKSKVENKAQKQLAAVNAWENT 450
           S GS+DRD+ALAEVEKEKR SF+KAWE+SEKSK ENKAQK+L++V AWEN+
Sbjct: 61  SGGSLDRDIALAEVEKEKRNSFIKAWEDSEKSKAENKAQKKLSSVTAWENS 111


>ref|XP_002270914.1| PREDICTED: uncharacterized protein At3g61260 isoform 1 [Vitis
           vinifera] gi|225454146|ref|XP_002270957.1| PREDICTED:
           uncharacterized protein At3g61260 isoform 2 [Vitis
           vinifera] gi|297745246|emb|CBI40326.3| unnamed protein
           product [Vitis vinifera]
          Length = 196

 Score =  114 bits (284), Expect = 1e-23
 Identities = 62/100 (62%), Positives = 75/100 (75%), Gaps = 8/100 (8%)
 Frame = +1

Query: 175 EMESPTVPAPEK----LIRPVIPP----ADDSKSLAVVEKTPDPVAKTTSKGSIDRDVAL 330
           E    T PA  K    L + V+PP    AD+SK+LAVVEKTPD  AK TS GS +RDVAL
Sbjct: 18  EFPPATTPADVKNDVALEKSVVPPPEVKADESKALAVVEKTPDSAAKKTSGGSFERDVAL 77

Query: 331 AEVEKEKRLSFVKAWEESEKSKVENKAQKQLAAVNAWENT 450
           A +EKEK+LSF++AWEESEKSKV+NKAQK+L+ V AWEN+
Sbjct: 78  ANLEKEKQLSFIRAWEESEKSKVDNKAQKKLSDVCAWENS 117


>emb|CAN75437.1| hypothetical protein VITISV_000833 [Vitis vinifera]
          Length = 196

 Score =  114 bits (284), Expect = 1e-23
 Identities = 62/100 (62%), Positives = 75/100 (75%), Gaps = 8/100 (8%)
 Frame = +1

Query: 175 EMESPTVPAPEK----LIRPVIPP----ADDSKSLAVVEKTPDPVAKTTSKGSIDRDVAL 330
           E    T PA  K    L + V+PP    AD+SK+LAVVEKTPD  AK TS GS +RDVAL
Sbjct: 18  EFXPATTPADVKNDVALEKSVVPPPEVKADESKALAVVEKTPDSAAKKTSGGSFERDVAL 77

Query: 331 AEVEKEKRLSFVKAWEESEKSKVENKAQKQLAAVNAWENT 450
           A +EKEK+LSF++AWEESEKSKV+NKAQK+L+ V AWEN+
Sbjct: 78  ANLEKEKQLSFIRAWEESEKSKVDNKAQKKLSDVCAWENS 117


>gb|AFK39071.1| unknown [Lotus japonicus]
          Length = 187

 Score =  110 bits (276), Expect = 9e-23
 Identities = 65/104 (62%), Positives = 73/104 (70%), Gaps = 14/104 (13%)
 Frame = +1

Query: 181 ESPTVPAPEKLIRPVIPP-------------ADDSKSLAVV-EKTPDPVAKTTSKGSIDR 318
           ES T PAP   +  V PP             ADDSK+L VV EKTP P  K +SKGS+DR
Sbjct: 9   ESDTTPAP---VAAVPPPSNDAVAKKAPEVAADDSKALVVVPEKTPVPENKPSSKGSLDR 65

Query: 319 DVALAEVEKEKRLSFVKAWEESEKSKVENKAQKQLAAVNAWENT 450
           DVALAE+EKEKRLS+VKAWEESEKSK ENKAQK L+ V AWEN+
Sbjct: 66  DVALAELEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVAWENS 109


>ref|XP_003528866.1| PREDICTED: remorin-like [Glycine max]
          Length = 198

 Score =  110 bits (276), Expect = 9e-23
 Identities = 65/114 (57%), Positives = 78/114 (68%), Gaps = 10/114 (8%)
 Frame = +1

Query: 139 VELISTEQTQIVEMESPTVPAP--EKLIRPVIPP----ADDSKSLAVVEKT----PDPVA 288
           VE ++      V+ E P   AP  EK    V PP    A+++K+L VVEK     P+PV 
Sbjct: 8   VEPVTVPAPAPVDPEPPLAEAPPLEKKAVAVPPPVPAAAEETKALVVVEKENEKIPEPVK 67

Query: 289 KTTSKGSIDRDVALAEVEKEKRLSFVKAWEESEKSKVENKAQKQLAAVNAWENT 450
           K  S GS+DRD+ALAE+EKEKRLS VKAWEESEKSK ENKAQKQL+AV AWEN+
Sbjct: 68  KNASGGSLDRDIALAEIEKEKRLSNVKAWEESEKSKAENKAQKQLSAVAAWENS 121


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