BLASTX nr result

ID: Panax21_contig00018203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018203
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|2235...   145   3e-33
ref|XP_002270914.1| PREDICTED: uncharacterized protein At3g61260...   142   2e-32
emb|CAN75437.1| hypothetical protein VITISV_000833 [Vitis vinifera]   142   3e-32
ref|XP_003528866.1| PREDICTED: remorin-like [Glycine max]             141   5e-32
gb|AFK39071.1| unknown [Lotus japonicus]                              138   4e-31

>ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|223549013|gb|EEF50502.1|
           Remorin, putative [Ricinus communis]
          Length = 188

 Score =  145 bits (366), Expect = 3e-33
 Identities = 77/134 (57%), Positives = 100/134 (74%), Gaps = 10/134 (7%)
 Frame = -3

Query: 372 ISAEQTQIVEMESPAVPAPEKLIRPV------IPPA----NDSKALAVVEKTPDPVAKTT 223
           ++ ++ + +E ESP  PAP +    V      +P      +DSKALAVVEK P+   K T
Sbjct: 1   MAEQEAKKLEAESPVAPAPAEAKSDVAHDKATVPTPEEKPDDSKALAVVEKVPESGPKKT 60

Query: 222 SKGSIDRDVALAEVEKEKRLSFVKAWEESEKSKVENKAQKQLAAVNAWENTQKAKVESKL 43
           S GS+DRD+ALAEVEKEKR SF+KAWE+SEKSK ENKAQK+L++V AWEN++KA +E+KL
Sbjct: 61  SGGSLDRDIALAEVEKEKRNSFIKAWEDSEKSKAENKAQKKLSSVTAWENSKKAALEAKL 120

Query: 42  RKVEEDLEKKKAEH 1
           RK+EE LEKKKAE+
Sbjct: 121 RKIEEQLEKKKAEY 134


>ref|XP_002270914.1| PREDICTED: uncharacterized protein At3g61260 isoform 1 [Vitis
           vinifera] gi|225454146|ref|XP_002270957.1| PREDICTED:
           uncharacterized protein At3g61260 isoform 2 [Vitis
           vinifera] gi|297745246|emb|CBI40326.3| unnamed protein
           product [Vitis vinifera]
          Length = 196

 Score =  142 bits (359), Expect = 2e-32
 Identities = 74/116 (63%), Positives = 92/116 (79%)
 Frame = -3

Query: 348 VEMESPAVPAPEKLIRPVIPPANDSKALAVVEKTPDPVAKTTSKGSIDRDVALAEVEKEK 169
           V +E   VP PE         A++SKALAVVEKTPD  AK TS GS +RDVALA +EKEK
Sbjct: 32  VALEKSVVPPPEV-------KADESKALAVVEKTPDSAAKKTSGGSFERDVALANLEKEK 84

Query: 168 RLSFVKAWEESEKSKVENKAQKQLAAVNAWENTQKAKVESKLRKVEEDLEKKKAEH 1
           +LSF++AWEESEKSKV+NKAQK+L+ V AWEN++KA VE+ L+K+EE+LEKKKAE+
Sbjct: 85  QLSFIRAWEESEKSKVDNKAQKKLSDVCAWENSKKAAVEANLKKIEEELEKKKAEY 140


>emb|CAN75437.1| hypothetical protein VITISV_000833 [Vitis vinifera]
          Length = 196

 Score =  142 bits (358), Expect = 3e-32
 Identities = 74/116 (63%), Positives = 92/116 (79%)
 Frame = -3

Query: 348 VEMESPAVPAPEKLIRPVIPPANDSKALAVVEKTPDPVAKTTSKGSIDRDVALAEVEKEK 169
           V +E   VP PE         A++SKALAVVEKTPD  AK TS GS +RDVALA +EKEK
Sbjct: 32  VALEKSVVPPPEV-------KADESKALAVVEKTPDSAAKKTSGGSFERDVALANLEKEK 84

Query: 168 RLSFVKAWEESEKSKVENKAQKQLAAVNAWENTQKAKVESKLRKVEEDLEKKKAEH 1
           +LSF++AWEESEKSKV+NKAQK+L+ V AWEN++KA VE+ L+K+EE+LEKKKAE+
Sbjct: 85  QLSFIRAWEESEKSKVDNKAQKKLSDVCAWENSKKAAVEAXLKKIEEELEKKKAEY 140


>ref|XP_003528866.1| PREDICTED: remorin-like [Glycine max]
          Length = 198

 Score =  141 bits (356), Expect = 5e-32
 Identities = 81/137 (59%), Positives = 98/137 (71%), Gaps = 10/137 (7%)
 Frame = -3

Query: 381 VELISAEQTQIVEMESPAVPAP--EKLIRPVIPP----ANDSKALAVVEKT----PDPVA 232
           VE ++      V+ E P   AP  EK    V PP    A ++KAL VVEK     P+PV 
Sbjct: 8   VEPVTVPAPAPVDPEPPLAEAPPLEKKAVAVPPPVPAAAEETKALVVVEKENEKIPEPVK 67

Query: 231 KTTSKGSIDRDVALAEVEKEKRLSFVKAWEESEKSKVENKAQKQLAAVNAWENTQKAKVE 52
           K  S GS+DRD+ALAE+EKEKRLS VKAWEESEKSK ENKAQKQL+AV AWEN++KA +E
Sbjct: 68  KNASGGSLDRDIALAEIEKEKRLSNVKAWEESEKSKAENKAQKQLSAVAAWENSKKAALE 127

Query: 51  SKLRKVEEDLEKKKAEH 1
           ++LRK+EE LEKKKAE+
Sbjct: 128 AQLRKIEEQLEKKKAEY 144


>gb|AFK39071.1| unknown [Lotus japonicus]
          Length = 187

 Score =  138 bits (348), Expect = 4e-31
 Identities = 79/127 (62%), Positives = 93/127 (73%), Gaps = 14/127 (11%)
 Frame = -3

Query: 339 ESPAVPAPEKLIRPVIPPAND-------------SKALAVV-EKTPDPVAKTTSKGSIDR 202
           ES   PAP   +  V PP+ND             SKAL VV EKTP P  K +SKGS+DR
Sbjct: 9   ESDTTPAP---VAAVPPPSNDAVAKKAPEVAADDSKALVVVPEKTPVPENKPSSKGSLDR 65

Query: 201 DVALAEVEKEKRLSFVKAWEESEKSKVENKAQKQLAAVNAWENTQKAKVESKLRKVEEDL 22
           DVALAE+EKEKRLS+VKAWEESEKSK ENKAQK L+ V AWEN++KA +E++LRK+EE L
Sbjct: 66  DVALAELEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVAWENSKKAALEAQLRKIEERL 125

Query: 21  EKKKAEH 1
           EKKKAE+
Sbjct: 126 EKKKAEY 132


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