BLASTX nr result

ID: Panax21_contig00018178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018178
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35207.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_002264002.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...   134   1e-29
emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]   134   1e-29
ref|XP_004139243.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...   131   8e-29
ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...   130   1e-28

>emb|CBI35207.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  134 bits (336), Expect = 1e-29
 Identities = 57/72 (79%), Positives = 65/72 (90%)
 Frame = +3

Query: 342 MKNQVVKVRREKLKACMICPLCNKLMKEATTVSLCLHTFCRKCIYKKLSDEEADCCPICY 521
           M +QVVKVRRE + ACM CPLCNKL+KEATT+SLCLHTFCRKCIY+KLSDEE DCCP+C 
Sbjct: 1   MTSQVVKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCN 60

Query: 522 TDLGCIPVEKLR 557
            DLGC+PV+KLR
Sbjct: 61  IDLGCVPVDKLR 72


>ref|XP_002264002.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis vinifera]
          Length = 449

 Score =  134 bits (336), Expect = 1e-29
 Identities = 57/72 (79%), Positives = 65/72 (90%)
 Frame = +3

Query: 342 MKNQVVKVRREKLKACMICPLCNKLMKEATTVSLCLHTFCRKCIYKKLSDEEADCCPICY 521
           M +QVVKVRRE + ACM CPLCNKL+KEATT+SLCLHTFCRKCIY+KLSDEE DCCP+C 
Sbjct: 1   MTSQVVKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCN 60

Query: 522 TDLGCIPVEKLR 557
            DLGC+PV+KLR
Sbjct: 61  IDLGCVPVDKLR 72


>emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]
          Length = 662

 Score =  134 bits (336), Expect = 1e-29
 Identities = 57/72 (79%), Positives = 65/72 (90%)
 Frame = +3

Query: 342 MKNQVVKVRREKLKACMICPLCNKLMKEATTVSLCLHTFCRKCIYKKLSDEEADCCPICY 521
           M +QVVKVRRE + ACM CPLCNKL+KEATT+SLCLHTFCRKCIY+KLSDEE DCCP+C 
Sbjct: 1   MTSQVVKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCN 60

Query: 522 TDLGCIPVEKLR 557
            DLGC+PV+KLR
Sbjct: 61  IDLGCVPVDKLR 72


>ref|XP_004139243.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
           gi|449483021|ref|XP_004156472.1| PREDICTED: E3 ubiquitin
           protein ligase DRIP2-like [Cucumis sativus]
          Length = 451

 Score =  131 bits (329), Expect = 8e-29
 Identities = 56/72 (77%), Positives = 65/72 (90%)
 Frame = +3

Query: 342 MKNQVVKVRREKLKACMICPLCNKLMKEATTVSLCLHTFCRKCIYKKLSDEEADCCPICY 521
           M  QVV+V+RE L+ACM CPLCNKL+KEATT+SLCLHTFCRKCIY+KLSD+E DCCP+C 
Sbjct: 1   MAGQVVRVKREILEACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDDEVDCCPVCD 60

Query: 522 TDLGCIPVEKLR 557
            DLGC+PVEKLR
Sbjct: 61  IDLGCLPVEKLR 72


>ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Vitis vinifera]
           gi|297735508|emb|CBI17948.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score =  130 bits (328), Expect = 1e-28
 Identities = 55/72 (76%), Positives = 64/72 (88%)
 Frame = +3

Query: 342 MKNQVVKVRREKLKACMICPLCNKLMKEATTVSLCLHTFCRKCIYKKLSDEEADCCPICY 521
           M NQVVKVRRE + ACM CPLCNKL+++ATT+S CLHTFCRKCIY K+SDEE +CCPIC 
Sbjct: 1   MSNQVVKVRRETIAACMTCPLCNKLLRDATTISECLHTFCRKCIYNKISDEELECCPICN 60

Query: 522 TDLGCIPVEKLR 557
           TDLGC+P+EKLR
Sbjct: 61  TDLGCVPLEKLR 72


Top