BLASTX nr result

ID: Panax21_contig00018175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018175
         (1327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142729.1| PREDICTED: uncharacterized protein LOC101206...   175   2e-41
ref|XP_002528710.1| DNA binding protein, putative [Ricinus commu...   134   7e-29
ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267...   129   2e-27
ref|XP_003551619.1| PREDICTED: uncharacterized protein LOC100797...   124   5e-26
ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|2...   124   5e-26

>ref|XP_004142729.1| PREDICTED: uncharacterized protein LOC101206216 [Cucumis sativus]
          Length = 578

 Score =  175 bits (444), Expect = 2e-41
 Identities = 138/335 (41%), Positives = 156/335 (46%), Gaps = 4/335 (1%)
 Frame = -1

Query: 1042 DLFSRNRRSLPIPPNSFDDFSQAVSVKLGRLSVGSAQQAKSGFDDLLLSSTEGGKNDYDW 863
            DLFS+NRR+L +  +  DD S A SVKLGRLSVGS + AKSG DDLL SSTEGGK+DYDW
Sbjct: 39   DLFSKNRRTLSVTAS--DDSSDA-SVKLGRLSVGSVKLAKSGIDDLL-SSTEGGKHDYDW 94

Query: 862  LLTPPGTPLFPSSDGSEXXXXXXXXXXXXXXXXXXXSKASRLSVSQSE-NNHXXXXXXXX 686
            LLTPPGTPLFPSS  SE                   +KASRLSVSQSE NN         
Sbjct: 95   LLTPPGTPLFPSSSESEIQSTVAAPRSSTLVRSSSTTKASRLSVSQSESNNPSRPVRSSS 154

Query: 685  XXXXXXXXXXXXXXXSNKS-TSILNTSSASVSSYIXXXXXXXXXXXXXXXXXXXXXXXXX 509
                           SN+S +SILNTSSASVSSYI                         
Sbjct: 155  VSRSSVSTPQYSSYSSNRSASSILNTSSASVSSYIRPSSPSTRSASSARPSTPSSRSTPS 214

Query: 508  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQIPANLXXXXXXXXXXXXXXXXXXX 329
                                              PQIPANL                   
Sbjct: 215  RSSTPSRARPSPNSPSIEKPRPLQSSRPSTPNSRPQIPANLSSPAARSNSRPSTPTRRNS 274

Query: 328  XXXXXXXXXXXXTVGRTLS-NGRNAAXXXXXXXXXXXXXXXXXPIVLPDFPLDTPPNLRT 152
                        +  R LS NGR++                  PIV PDFPLDTPPNLRT
Sbjct: 275  APSLSSVVGTPSSTSRVLSTNGRSSTSTSRPSSPSPRVRAAPQPIVPPDFPLDTPPNLRT 334

Query: 151  TLPDRPLSAGRSRPGVALTVKGNIDTPST-AIPRR 50
            TLPDRP+SAGRSRP  A +V+G+ +T ST  +PRR
Sbjct: 335  TLPDRPISAGRSRPTPASSVRGSPETTSTGTVPRR 369


>ref|XP_002528710.1| DNA binding protein, putative [Ricinus communis]
            gi|223531882|gb|EEF33699.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 580

 Score =  134 bits (336), Expect = 7e-29
 Identities = 83/153 (54%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
 Frame = -1

Query: 1042 DLFSRNRRSLPIPPNSFDDFSQAVSVKLGRLSVGSAQQAKSGFDDLLLSSTEGGKNDYDW 863
            DLFS+NRRSL +  +   D S  VS+KLGR+SVGSA+ AKSG DDLL SST+GGK+DYDW
Sbjct: 54   DLFSKNRRSLSVASS---DESSDVSMKLGRVSVGSAKVAKSGIDDLL-SSTDGGKHDYDW 109

Query: 862  LLTPPGTPLFPSSDGSEXXXXXXXXXXXXXXXXXXXSKASRLSVSQSENNH-XXXXXXXX 686
            LLTPPGTPLFP+SDGS+                   +KASRLSVSQSE+ H         
Sbjct: 110  LLTPPGTPLFPTSDGSDSQPTLVAPRSRSLSRSVSTTKASRLSVSQSESQHSSRPTRSSS 169

Query: 685  XXXXXXXXXXXXXXXSNKSTSILNTSSASVSSY 587
                           SN+S+SILNTSSASVSSY
Sbjct: 170  VTRSSISNSQYSTYSSNRSSSILNTSSASVSSY 202



 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 46/93 (49%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
 Frame = -1

Query: 286 GRTLSNGRNAAXXXXXXXXXXXXXXXXXPIVLPDFPLDTPPNLRTTLPDRPLSAGRSRPG 107
           GR  SNGR +A                 P+V PDFPLDTPPNLRTTLPDRP+SAGRSRPG
Sbjct: 303 GRVPSNGRISAPASRPSSPGPRIRPSQQPVVPPDFPLDTPPNLRTTLPDRPISAGRSRPG 362

Query: 106 VALTVKGNIDTP-STAIPRRQFPEVQAL*RAAQ 11
            + T+KG+ +T  +T +PRR    + +  R A+
Sbjct: 363 ASTTIKGSPETTGATNVPRRHSSPIVSRGRLAE 395


>ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267210 [Vitis vinifera]
            gi|147841364|emb|CAN71240.1| hypothetical protein
            VITISV_034160 [Vitis vinifera]
            gi|296085846|emb|CBI31170.3| unnamed protein product
            [Vitis vinifera]
          Length = 570

 Score =  129 bits (323), Expect = 2e-27
 Identities = 78/152 (51%), Positives = 95/152 (62%)
 Frame = -1

Query: 1042 DLFSRNRRSLPIPPNSFDDFSQAVSVKLGRLSVGSAQQAKSGFDDLLLSSTEGGKNDYDW 863
            DLFSRNRR+L +  +   +    V +KLGRLSVGSA+ A+SG DDLL SS EGGK+DYDW
Sbjct: 39   DLFSRNRRTLSVVSSEESE----VPLKLGRLSVGSAKLARSGMDDLL-SSVEGGKHDYDW 93

Query: 862  LLTPPGTPLFPSSDGSEXXXXXXXXXXXXXXXXXXXSKASRLSVSQSENNHXXXXXXXXX 683
            LLTPPGTPLFPSSDG+E                   +KASRLSV+QSE+++         
Sbjct: 94   LLTPPGTPLFPSSDGNESQPTMLAPRNSNLARSASTTKASRLSVAQSESSYSRPTRSSSV 153

Query: 682  XXXXXXXXXXXXXXSNKSTSILNTSSASVSSY 587
                          S++S+SILNTSSASVSSY
Sbjct: 154  TRPSISTSQYSTYSSSRSSSILNTSSASVSSY 185



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 46/72 (63%), Positives = 51/72 (70%)
 Frame = -1

Query: 283 RTLSNGRNAAXXXXXXXXXXXXXXXXXPIVLPDFPLDTPPNLRTTLPDRPLSAGRSRPGV 104
           R +SNGRN A                 PIVLPDFPLDTPPNLRTTLPDRPLSAGRSRPG 
Sbjct: 287 RAMSNGRNPAPASRPSSPSPRVRNPPQPIVLPDFPLDTPPNLRTTLPDRPLSAGRSRPGA 346

Query: 103 ALTVKGNIDTPS 68
           A+T+KGN +TP+
Sbjct: 347 AMTMKGNSETPT 358


>ref|XP_003551619.1| PREDICTED: uncharacterized protein LOC100797203 [Glycine max]
          Length = 698

 Score =  124 bits (311), Expect = 5e-26
 Identities = 84/165 (50%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
 Frame = -1

Query: 1066 DHHHLIMADLFSRNRRSLPIPPNSFDDFSQAVSVKLGRLSVGSAQQAKSGFDDLLLSSTE 887
            +HHH    DLFS NRRSL +  +S D  S  VSVKLGRLSVG+A+  +SG DDLL SSTE
Sbjct: 144  NHHHDDNLDLFSDNRRSLALAASSDD--SSDVSVKLGRLSVGTAKPVRSGIDDLL-SSTE 200

Query: 886  GGKNDYDWLLTPPGTPLFPSSDGSEXXXXXXXXXXXXXXXXXXXSKASRLSVSQSENN-- 713
            GGK+DYDWLLTPPGTP+FPS   S+                   SKASRL+VSQSENN  
Sbjct: 201  GGKHDYDWLLTPPGTPVFPSEGESQ---TTLAPPRRSLTRSTSTSKASRLAVSQSENNPP 257

Query: 712  --HXXXXXXXXXXXXXXXXXXXXXXXSNKSTSILNTSSASVSSYI 584
                                      +  S+SILNTSSASVSSYI
Sbjct: 258  SRPARSSSVTRSSISTSHSQYSSYSSNRHSSSILNTSSASVSSYI 302



 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
 Frame = -1

Query: 286 GRTLSNGRNAAXXXXXXXXXXXXXXXXXPIVLPDFPLDTPPNLRTTLPDRPLSAGRSRPG 107
           GR  SNGR++A                 PIV PDFPL+TPPNLRTTLPDRP+SAGRSRPG
Sbjct: 410 GRVSSNGRSSAPASRPSSPSPRVRPPPQPIVPPDFPLETPPNLRTTLPDRPVSAGRSRPG 469

Query: 106 VALTVKGNIDTPSTA---IPRR 50
             +T+K N+     +   +PRR
Sbjct: 470 -GVTMKANVSETQASPVTMPRR 490


>ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|222868313|gb|EEF05444.1|
            predicted protein [Populus trichocarpa]
          Length = 596

 Score =  124 bits (311), Expect = 5e-26
 Identities = 82/154 (53%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
 Frame = -1

Query: 1042 DLFSRNRRSLPIPPNSFDDFSQAVSVKLGRLSVGSAQQAKSGFDDLLLSSTEGGKNDYDW 863
            DLFS+NRRSL +  +   D S  VSVKLGRLSVGSA+  +SG DDLL  S+EGGK+DYDW
Sbjct: 62   DLFSKNRRSLSVASS---DESSDVSVKLGRLSVGSAKLVRSGIDDLL--SSEGGKHDYDW 116

Query: 862  LLTPPGTPLFPSSDGSEXXXXXXXXXXXXXXXXXXXSK-ASRLSVSQSENNH-XXXXXXX 689
            LLTPPGTPLFPSS+GSE                   +K AS LSVSQSE+ H        
Sbjct: 117  LLTPPGTPLFPSSEGSESQPTLVAPRSSSLARSASTTKAASTLSVSQSESYHSSRPARSS 176

Query: 688  XXXXXXXXXXXXXXXXSNKSTSILNTSSASVSSY 587
                            SN+S+SILNTSSASVSSY
Sbjct: 177  SVTRPSISSSQYSTYSSNRSSSILNTSSASVSSY 210



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 38/51 (74%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
 Frame = -1

Query: 199 IVLPDFPLDTPPNLRTTLPDRPLSAGRSRPGVALTVKGNIDTPSTAI-PRR 50
           +V PDFPLDTPPNLRTTLPDRPLSAGRSRP V  T+KGN +T  + I PRR
Sbjct: 339 VVPPDFPLDTPPNLRTTLPDRPLSAGRSRPNVHATMKGNPETVGSVIAPRR 389


Top