BLASTX nr result

ID: Panax21_contig00018167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018167
         (1671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vi...   395   e-121
emb|CAB50925.1| translocon Tic40 [Pisum sativum]                      358   e-109
ref|XP_002305876.1| predicted protein [Populus trichocarpa] gi|2...   355   e-108
ref|XP_003538352.1| PREDICTED: uncharacterized protein LOC100781...   360   e-107
ref|XP_004148914.1| PREDICTED: protein TIC 40, chloroplastic-lik...   348   e-104

>ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vitis vinifera]
            gi|296089465|emb|CBI39284.3| unnamed protein product
            [Vitis vinifera]
          Length = 436

 Score =  395 bits (1015), Expect(2) = e-121
 Identities = 208/314 (66%), Positives = 229/314 (72%), Gaps = 15/314 (4%)
 Frame = -1

Query: 1368 KYAMQQAFKTLMGQMDXXXXXXXXXXXXXXXXXXXXXXXXXXXTAS------------TS 1225
            KYAMQQAFKTLMGQMD                           + S            TS
Sbjct: 123  KYAMQQAFKTLMGQMDSQNNQFNTTTFSPGSPFPFPMPPPSGPSTSHSGPTTSPSGPTTS 182

Query: 1224 P---VASHEATVDVPVTKVEAPPTIEVKDDQELKMEPKKSAFVDVSPEETLQNNPFESFK 1054
            P    A    TVDVP TKVE PP  +VKDD E K E  K AFVDVSPEETLQ +PFE+F+
Sbjct: 183  PSTVAAQSMVTVDVPATKVETPPATDVKDDIEKKNEQNKYAFVDVSPEETLQESPFENFE 242

Query: 1053 ELTEKDSSKDSQFHTHGFQNGAAYKPGSDASEGFSSSRKTDSVLSVEALEKMMEDPMMQK 874
            E TE  SSKD+QF     QNG   +PG   SE   S+R  +  LSV+ALEKMMEDP +QK
Sbjct: 243  ESTETSSSKDAQFSAGVSQNGTPPRPGMGVSEDSQSTRNANPFLSVDALEKMMEDPTVQK 302

Query: 873  MIYPYLPEEMRNPTTFKWMLQNPQNRQQLQDMLNSMGGSADWDNRLKDSLENFDLSSPEV 694
            M+YPYLPEEMRNPTTFKWMLQNPQ RQQLQDMLN+MGG A+WDNR+ D+L+NFDLSSPEV
Sbjct: 303  MVYPYLPEEMRNPTTFKWMLQNPQYRQQLQDMLNNMGGGAEWDNRMMDNLKNFDLSSPEV 362

Query: 693  KQQFDQIGLTPEEVISKIMSNPDVAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKEVMDVF 514
            KQQFDQIGLTPEEVISKIM+NPDVA+AFQNPR+QAAIMDCSQNPLSIAKYQNDKEVMDVF
Sbjct: 363  KQQFDQIGLTPEEVISKIMANPDVALAFQNPRIQAAIMDCSQNPLSIAKYQNDKEVMDVF 422

Query: 513  NKISELFPGVAGSP 472
            NKISELFPGV+G P
Sbjct: 423  NKISELFPGVSGPP 436



 Score = 68.9 bits (167), Expect(2) = e-121
 Identities = 35/58 (60%), Positives = 38/58 (65%)
 Frame = -3

Query: 1606 VREKLGRKLFAXXXXXXXXXXXSVGVNPQISMPPPPSHVGSPLFWIGVGVGFSALFSW 1433
            V  KLG + FA            VGVNPQ S PPP S++GSPLFWIGVGVG SALFSW
Sbjct: 60   VETKLGTECFASISSSSQGTSS-VGVNPQFSPPPPSSNIGSPLFWIGVGVGLSALFSW 116


>emb|CAB50925.1| translocon Tic40 [Pisum sativum]
          Length = 436

 Score =  358 bits (920), Expect(2) = e-109
 Identities = 187/314 (59%), Positives = 223/314 (71%), Gaps = 15/314 (4%)
 Frame = -1

Query: 1368 KYAMQQAFKTLMGQMDXXXXXXXXXXXXXXXXXXXXXXXXXXXTA------------STS 1225
            KYAMQQAFK++MGQM+                                         ST 
Sbjct: 125  KYAMQQAFKSMMGQMNTQNNPFDSGAFSSGPPFPFPMPSASGPATPAGFAGNQSQATSTR 184

Query: 1224 PVASHEATVDVPVTKVEAP---PTIEVKDDQELKMEPKKSAFVDVSPEETLQNNPFESFK 1054
              +    TVD+P TKVEA    P I VK++ E+K EPKKSAFVDVSPEET+Q N FE FK
Sbjct: 185  SASQSTVTVDIPATKVEAAAPAPDINVKEEVEVKNEPKKSAFVDVSPEETVQKNAFERFK 244

Query: 1053 ELTEKDSSKDSQFHTHGFQNGAAYKPGSDASEGFSSSRKTDSVLSVEALEKMMEDPMMQK 874
            ++ E  S K+++      QNG  +K G   S G  S RK  S LSV+ALEKMMEDP +Q+
Sbjct: 245  DVDESSSFKEARAPAEASQNGTPFKQGFGDSPGSPSERK--SALSVDALEKMMEDPTVQQ 302

Query: 873  MIYPYLPEEMRNPTTFKWMLQNPQNRQQLQDMLNSMGGSADWDNRLKDSLENFDLSSPEV 694
            M+YPYLPEEMRNP+TFKWM+QNP+ RQQL+ MLN+MGG  +WD+R+ D+L+NFDL+SP+V
Sbjct: 303  MVYPYLPEEMRNPSTFKWMMQNPEYRQQLEAMLNNMGGGTEWDSRMMDTLKNFDLNSPDV 362

Query: 693  KQQFDQIGLTPEEVISKIMSNPDVAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKEVMDVF 514
            KQQFDQIGL+P+EVISKIM+NPDVAMAFQNPRVQAAIMDCSQNP+SI KYQNDKEVMDVF
Sbjct: 363  KQQFDQIGLSPQEVISKIMANPDVAMAFQNPRVQAAIMDCSQNPMSIVKYQNDKEVMDVF 422

Query: 513  NKISELFPGVAGSP 472
            NKISELFPGV+G P
Sbjct: 423  NKISELFPGVSGPP 436



 Score = 63.9 bits (154), Expect(2) = e-109
 Identities = 38/78 (48%), Positives = 45/78 (57%)
 Frame = -3

Query: 1669 SNGRTSIVGGKGRTSFMAAFPVREKLGRKLFAXXXXXXXXXXXSVGVNPQISMPPPPSHV 1490
            +N  +S V      S      V+ K+    FA           SVGV+PQ+S PPPPS V
Sbjct: 41   ANSSSSHVTRAASKSHQNLKSVQGKVNAHSFASISSSNGQETTSVGVSPQLS-PPPPSTV 99

Query: 1489 GSPLFWIGVGVGFSALFS 1436
            GSPLFWIG+GVGFSALFS
Sbjct: 100  GSPLFWIGIGVGFSALFS 117


>ref|XP_002305876.1| predicted protein [Populus trichocarpa] gi|222848840|gb|EEE86387.1|
            predicted protein [Populus trichocarpa]
          Length = 429

 Score =  355 bits (912), Expect(2) = e-108
 Identities = 192/305 (62%), Positives = 221/305 (72%), Gaps = 9/305 (2%)
 Frame = -1

Query: 1365 YAMQQAFKTLMGQMDXXXXXXXXXXXXXXXXXXXXXXXXXXXTASTSPVASHEA-TVDVP 1189
            YAMQQAFK+L  QM+                           + S SP AS  A TVD+P
Sbjct: 129  YAMQQAFKSLTEQMN-TQNNQFNPAFSARPPFPFSPPPASHPSTSPSPAASQPAITVDIP 187

Query: 1188 VTKVEAPPTIEVKDDQE--------LKMEPKKSAFVDVSPEETLQNNPFESFKELTEKDS 1033
             TKVEA PT +V  ++E        +K E KK AFVD+SPEET  N PF S ++  E  S
Sbjct: 188  ATKVEAAPTTDVGKEKETDFLEERKIKEETKKYAFVDISPEETSLNTPFSSVEDDNETSS 247

Query: 1032 SKDSQFHTHGFQNGAAYKPGSDASEGFSSSRKTDSVLSVEALEKMMEDPMMQKMIYPYLP 853
            SKD +F    FQNGAA+K G  A+EG   S+ T   LSVEALEKMMEDP MQKM+YPYLP
Sbjct: 248  SKDVEFAKKVFQNGAAFKQGPGAAEG---SQSTRPFLSVEALEKMMEDPTMQKMVYPYLP 304

Query: 852  EEMRNPTTFKWMLQNPQNRQQLQDMLNSMGGSADWDNRLKDSLENFDLSSPEVKQQFDQI 673
            EEMRNPTTFKWMLQNPQ RQQL+DMLN+MGGS  WD+++ DSL++FDL+S EVKQQFDQI
Sbjct: 305  EEMRNPTTFKWMLQNPQYRQQLEDMLNNMGGSGKWDSQMMDSLKDFDLNSAEVKQQFDQI 364

Query: 672  GLTPEEVISKIMSNPDVAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKEVMDVFNKISELF 493
            GLTPEEVISKIM+NPDVAMAFQNPRVQ AIM+CSQNP++I KYQNDKEVMDVFNKISELF
Sbjct: 365  GLTPEEVISKIMANPDVAMAFQNPRVQQAIMECSQNPINITKYQNDKEVMDVFNKISELF 424

Query: 492  PGVAG 478
            PG+ G
Sbjct: 425  PGMTG 429



 Score = 65.1 bits (157), Expect(2) = e-108
 Identities = 32/55 (58%), Positives = 37/55 (67%)
 Frame = -3

Query: 1597 KLGRKLFAXXXXXXXXXXXSVGVNPQISMPPPPSHVGSPLFWIGVGVGFSALFSW 1433
            KLG + FA           SVGVNPQ  + PPPS +GSPLFW+GVGVG SA+FSW
Sbjct: 68   KLGSEYFASISSSSGKQTASVGVNPQ-PVSPPPSQIGSPLFWVGVGVGLSAIFSW 121


>ref|XP_003538352.1| PREDICTED: uncharacterized protein LOC100781154 [Glycine max]
          Length = 429

 Score =  360 bits (923), Expect(2) = e-107
 Identities = 195/311 (62%), Positives = 224/311 (72%), Gaps = 12/311 (3%)
 Frame = -1

Query: 1368 KYAMQQAFKTLMGQMDXXXXXXXXXXXXXXXXXXXXXXXXXXXTA------------STS 1225
            KYAMQQAFKT+MGQM+                           TA            S S
Sbjct: 123  KYAMQQAFKTMMGQMNSQNNQFGNAAFSPGSPFPFPMPTAAGPTAPASSATTQSRAPSAS 182

Query: 1224 PVASHEATVDVPVTKVEAPPTIEVKDDQELKMEPKKSAFVDVSPEETLQNNPFESFKELT 1045
              +    TVD+P  KVEA PT  VKD+ ELK EPKK AFVDVSPEET++ +PFESFK+  
Sbjct: 183  SASQSTITVDLPAAKVEAAPTTNVKDEVELKNEPKKIAFVDVSPEETVRESPFESFKD-D 241

Query: 1044 EKDSSKDSQFHTHGFQNGAAYKPGSDASEGFSSSRKTDSVLSVEALEKMMEDPMMQKMIY 865
            E  S K++       QNGA    G     G  S++K  S LSV+ALEKMMEDP +QKM+Y
Sbjct: 242  ESSSVKEAWVPDEVSQNGAPSNLGFGDFPGSQSTKK--SALSVDALEKMMEDPTVQKMVY 299

Query: 864  PYLPEEMRNPTTFKWMLQNPQNRQQLQDMLNSMGGSADWDNRLKDSLENFDLSSPEVKQQ 685
            PYLPEEMRNPTTFKWMLQNPQ RQQL++MLN+MGGS +WDNR+ D+L+NFDL+SPEVKQQ
Sbjct: 300  PYLPEEMRNPTTFKWMLQNPQYRQQLEEMLNNMGGSTEWDNRMMDTLKNFDLNSPEVKQQ 359

Query: 684  FDQIGLTPEEVISKIMSNPDVAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKEVMDVFNKI 505
            FDQIGL+PEEVISKIM+NP+VAMAFQNPRVQAAIMDCSQNP++I KYQNDKEVMDVFNKI
Sbjct: 360  FDQIGLSPEEVISKIMANPEVAMAFQNPRVQAAIMDCSQNPMNITKYQNDKEVMDVFNKI 419

Query: 504  SELFPGVAGSP 472
            SELFPGV GSP
Sbjct: 420  SELFPGV-GSP 429



 Score = 57.8 bits (138), Expect(2) = e-107
 Identities = 33/57 (57%), Positives = 37/57 (64%)
 Frame = -3

Query: 1606 VREKLGRKLFAXXXXXXXXXXXSVGVNPQISMPPPPSHVGSPLFWIGVGVGFSALFS 1436
            V+EKL  K FA           S+GV PQ+S P P S +GSPLFWIGVGVG SALFS
Sbjct: 60   VQEKLIVKHFASISSSNTQETTSIGVKPQLS-PSPSSTIGSPLFWIGVGVGLSALFS 115


>ref|XP_004148914.1| PREDICTED: protein TIC 40, chloroplastic-like [Cucumis sativus]
          Length = 419

 Score =  348 bits (893), Expect(2) = e-104
 Identities = 190/299 (63%), Positives = 216/299 (72%)
 Frame = -1

Query: 1368 KYAMQQAFKTLMGQMDXXXXXXXXXXXXXXXXXXXXXXXXXXXTASTSPVASHEATVDVP 1189
            KYAMQQAFKT+M QM+                           T S S V+    ++DV 
Sbjct: 125  KYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTISPS-VSEPAVSIDVT 183

Query: 1188 VTKVEAPPTIEVKDDQELKMEPKKSAFVDVSPEETLQNNPFESFKELTEKDSSKDSQFHT 1009
             TKVE  P   VK   E  ME KK AFVDVSPEET Q +PF+  ++ T+ D SK +Q   
Sbjct: 184  ATKVEEEPVTNVKSRTE-NMEAKKFAFVDVSPEETDQKSPFK--EDATDADVSKSAQPTQ 240

Query: 1008 HGFQNGAAYKPGSDASEGFSSSRKTDSVLSVEALEKMMEDPMMQKMIYPYLPEEMRNPTT 829
               QNGAA K   + S+G   SRK  SVLSVEA+EKMMEDP +QKMIYP+LPEEMRNP T
Sbjct: 241  ELPQNGAASKQAYNGSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET 300

Query: 828  FKWMLQNPQNRQQLQDMLNSMGGSADWDNRLKDSLENFDLSSPEVKQQFDQIGLTPEEVI 649
            FKWM+QNP  RQQL++MLN+M GS  WD RL DSL+NFDLSSPEVKQQFDQIGLTPEEVI
Sbjct: 301  FKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVI 360

Query: 648  SKIMSNPDVAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKEVMDVFNKISELFPGVAGSP 472
            SKIM+NP++AMAFQNPRVQAAIMDCSQNPLSI KYQNDKEVMDVFNKISELFPGV+G+P
Sbjct: 361  SKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 419



 Score = 60.1 bits (144), Expect(2) = e-104
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -3

Query: 1537 VGVNPQISMPPPPSHVGSPLFWIGVGVGFSALFSW 1433
            VGV P +S+PPP S+VGSPLFW+GVGVG SALF+W
Sbjct: 85   VGV-PSVSIPPPSSYVGSPLFWVGVGVGLSALFTW 118


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